RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 IQSEC2Q5JU85 1478 aa25.62■■□□□ 1.69
COL18A1-205ENST00000423214 ZC3H13Q5T200 1668 aaKnown RBP25.61■■□□□ 1.69
COL18A1-205ENST00000423214 A2ML1A8K2U0 1454 aa25.61■■□□□ 1.69
COL18A1-205ENST00000423214 KIF3BO15066 747 aa25.61■■□□□ 1.69
COL18A1-205ENST00000423214 RNF17Q9BXT8 1623 aaKnown RBP25.61■■□□□ 1.69
COL18A1-205ENST00000423214 EIF2AK4Q9P2K8 1649 aaKnown RBP25.6■■□□□ 1.69
COL18A1-205ENST00000423214 LOC105371045A0A1W2PR82 267 aa25.6■■□□□ 1.69
COL18A1-205ENST00000423214 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
COL18A1-205ENST00000423214 PZPP20742 1482 aa25.59■■□□□ 1.69
COL18A1-205ENST00000423214 NCKAP5LQ9HCH0 1330 aa25.58■■□□□ 1.69
COL18A1-205ENST00000423214 TSPY4P0CV99 314 aa25.57■■□□□ 1.68
COL18A1-205ENST00000423214 TSPY10P0CW01 314 aa25.57■■□□□ 1.68
COL18A1-205ENST00000423214 CROCC2H7BZ55 1655 aa25.57■■□□□ 1.68
COL18A1-205ENST00000423214 PKD2Q13563 968 aa25.55■■□□□ 1.68
COL18A1-205ENST00000423214 TNRQ92752 1358 aa25.55■■□□□ 1.68
COL18A1-205ENST00000423214 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
COL18A1-205ENST00000423214 CEP152O94986 1710 aa25.54■■□□□ 1.68
COL18A1-205ENST00000423214 WASHC2CQ9Y4E1 1318 aa25.52■■□□□ 1.68
COL18A1-205ENST00000423214 MIA2Q96PC5 1412 aa25.52■■□□□ 1.68
COL18A1-205ENST00000423214 CFAP65Q6ZU64 1925 aaKnown RBP25.49■■□□□ 1.67
COL18A1-205ENST00000423214 NEURL4Q96JN8 1562 aa25.48■■□□□ 1.67
COL18A1-205ENST00000423214 ZNF335Q9H4Z2 1342 aaPredicted RBP25.48■■□□□ 1.67
COL18A1-205ENST00000423214 ABCC3O15438 1527 aa25.47■■□□□ 1.67
COL18A1-205ENST00000423214 NLRP1Q9C000 1473 aa25.47■■□□□ 1.67
COL18A1-205ENST00000423214 KANK4Q5T7N3 995 aaPredicted RBP25.47■■□□□ 1.67
COL18A1-205ENST00000423214 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
COL18A1-205ENST00000423214 MROH1Q8NDA8 1641 aa25.46■■□□□ 1.67
COL18A1-205ENST00000423214 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
COL18A1-205ENST00000423214 UGGT1Q9NYU2 1555 aa25.45■■□□□ 1.66
COL18A1-205ENST00000423214 DUOX2Q9NRD8 1548 aa25.45■■□□□ 1.66
COL18A1-205ENST00000423214 SPATA31D1Q6ZQQ2 1576 aa25.42■■□□□ 1.66
COL18A1-205ENST00000423214 DEPDC5O75140 1603 aa25.41■■□□□ 1.66
COL18A1-205ENST00000423214 SHANK2Q9UPX8 1470 aa25.41■■□□□ 1.66
COL18A1-205ENST00000423214 APLP2Q06481 763 aa25.4■■□□□ 1.66
COL18A1-205ENST00000423214 IQGAP1P46940 1657 aa25.39■■□□□ 1.66
COL18A1-205ENST00000423214 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
COL18A1-205ENST00000423214 ERVK-7P63135 1459 aa25.37■■□□□ 1.65
COL18A1-205ENST00000423214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.36■■□□□ 1.659e-7■■■■□ 19.4
COL18A1-205ENST00000423214 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
COL18A1-205ENST00000423214 CPS1P31327 1500 aa25.36■■□□□ 1.65
COL18A1-205ENST00000423214 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
COL18A1-205ENST00000423214 KIF15Q9NS87 1388 aa25.34■■□□□ 1.65
COL18A1-205ENST00000423214 THEMISQ8N1K5 641 aaPredicted RBP25.34■■□□□ 1.65
COL18A1-205ENST00000423214 ERBINQ96RT1 1412 aa25.34■■□□□ 1.65
COL18A1-205ENST00000423214 UBAP1LF5GYI3 381 aa25.32■■□□□ 1.64
COL18A1-205ENST00000423214 ANKLE2Q86XL3 938 aa25.32■■□□□ 1.64
COL18A1-205ENST00000423214 DAPK1P53355 1430 aa25.31■■□□□ 1.64
COL18A1-205ENST00000423214 FGD6Q6ZV73 1430 aa25.31■■□□□ 1.64
COL18A1-205ENST00000423214 VWDEQ8N2E2 1590 aa25.31■■□□□ 1.64
COL18A1-205ENST00000423214 ABCC5O15440 1437 aa25.3■■□□□ 1.64
COL18A1-205ENST00000423214 MED14O60244 1454 aa25.3■■□□□ 1.64
COL18A1-205ENST00000423214 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
COL18A1-205ENST00000423214 SYNMO15061 1565 aa25.26■■□□□ 1.63
COL18A1-205ENST00000423214 STRCP1A6NGW2 1772 aa25.24■■□□□ 1.63
COL18A1-205ENST00000423214 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
COL18A1-205ENST00000423214 ARHGAP31Q2M1Z3 1444 aa25.22■■□□□ 1.63
COL18A1-205ENST00000423214 PIK3C2BO00750 1634 aa25.22■■□□□ 1.63
COL18A1-205ENST00000423214 KANK1Q14678 1352 aa25.21■■□□□ 1.63
COL18A1-205ENST00000423214 ANKRD30AQ9BXX3 1397 aa25.2■■□□□ 1.63
COL18A1-205ENST00000423214 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
COL18A1-205ENST00000423214 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
COL18A1-205ENST00000423214 SCAF11Q99590 1463 aaKnown RBP25.18■■□□□ 1.62
COL18A1-205ENST00000423214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.17■■□□□ 1.62
COL18A1-205ENST00000423214 SLIT1O75093 1534 aa25.17■■□□□ 1.62
COL18A1-205ENST00000423214 LMTK2Q8IWU2 1503 aa25.16■■□□□ 1.62
COL18A1-205ENST00000423214 EFCAB6Q5THR3 1501 aa25.14■■□□□ 1.62
COL18A1-205ENST00000423214 TOM1O60784 492 aa25.14■■□□□ 1.62
COL18A1-205ENST00000423214 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.62
COL18A1-205ENST00000423214 ARHGAP23Q9P227 1491 aa25.14■■□□□ 1.61
COL18A1-205ENST00000423214 ADGRL2O95490 1459 aa25.13■■□□□ 1.61
COL18A1-205ENST00000423214 PIP4K2BP78356 416 aa25.12■■□□□ 1.61
COL18A1-205ENST00000423214 ILDR2Q71H61 639 aa25.12■■□□□ 1.61
COL18A1-205ENST00000423214 LRRC7Q96NW7 1537 aa25.09■■□□□ 1.61
COL18A1-205ENST00000423214 ALKQ9UM73 1620 aa25.08■■□□□ 1.61
COL18A1-205ENST00000423214 XIRP1Q702N8 1843 aaKnown RBP25.08■■□□□ 1.61
COL18A1-205ENST00000423214 GCC2Q8IWJ2 1684 aa25.07■■□□□ 1.6
COL18A1-205ENST00000423214 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
COL18A1-205ENST00000423214 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
COL18A1-205ENST00000423214 TET3O43151 1660 aa25.06■■□□□ 1.6
COL18A1-205ENST00000423214 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
COL18A1-205ENST00000423214 MYO5BQ9ULV0 1848 aa25.05■■□□□ 1.6
COL18A1-205ENST00000423214 STAG3Q9UJ98 1225 aa25.05■■□□□ 1.6
COL18A1-205ENST00000423214 EID1Q9Y6B2 187 aa25.05■■□□□ 1.6
COL18A1-205ENST00000423214 HSPA1LP34931 641 aa25.03■■□□□ 1.6
COL18A1-205ENST00000423214 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
COL18A1-205ENST00000423214 TMEM2Q9UHN6 1383 aa25.02■■□□□ 1.6
COL18A1-205ENST00000423214 UNC13BO14795 1591 aa25.01■■□□□ 1.59
COL18A1-205ENST00000423214 SOCS7O14512 581 aa25.01■■□□□ 1.59
COL18A1-205ENST00000423214 LTKP29376 864 aa25.01■■□□□ 1.59
COL18A1-205ENST00000423214 ANKRD50Q9ULJ7 1429 aa25.01■■□□□ 1.59
COL18A1-205ENST00000423214 NOS1P29475 1434 aa24.99■■□□□ 1.59
COL18A1-205ENST00000423214 RPRD2Q5VT52 1461 aaKnown RBP24.99■■□□□ 1.59
COL18A1-205ENST00000423214 IDI1Q13907 227 aa24.94■■□□□ 1.58
COL18A1-205ENST00000423214 E9PCH4 1651 aa24.93■■□□□ 1.58
COL18A1-205ENST00000423214 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
COL18A1-205ENST00000423214 NWD1Q149M9 1564 aa24.9■■□□□ 1.58
COL18A1-205ENST00000423214 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
COL18A1-205ENST00000423214 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
COL18A1-205ENST00000423214 SLC52A1Q9NWF4 448 aa24.88■■□□□ 1.57
COL18A1-205ENST00000423214 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms