RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
HLA-DQA1-204ENST00000422863 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.39
HLA-DQA1-204ENST00000422863 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
HLA-DQA1-204ENST00000422863 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
HLA-DQA1-204ENST00000422863 PIP4K2BP78356 416 aa12.56□□□□□ -0.4
HLA-DQA1-204ENST00000422863 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
HLA-DQA1-204ENST00000422863 CLTCQ00610 1675 aaKnown RBP12.56□□□□□ -0.4
HLA-DQA1-204ENST00000422863 HSPA1LP34931 641 aa12.55□□□□□ -0.4
HLA-DQA1-204ENST00000422863 CDK11AQ9UQ88 783 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQA1-204ENST00000422863 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQA1-204ENST00000422863 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
HLA-DQA1-204ENST00000422863 AGLP35573 1532 aa12.54□□□□□ -0.4
HLA-DQA1-204ENST00000422863 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
HLA-DQA1-204ENST00000422863 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
HLA-DQA1-204ENST00000422863 ZMYM3Q14202 1370 aa12.53□□□□□ -0.4
HLA-DQA1-204ENST00000422863 TROQ12816 1431 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQA1-204ENST00000422863 PREX2Q70Z35 1606 aa12.52□□□□□ -0.4
HLA-DQA1-204ENST00000422863 MYO3AQ8NEV4 1616 aa12.51□□□□□ -0.41
HLA-DQA1-204ENST00000422863 ZNF692Q9BU19 519 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQA1-204ENST00000422863 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
HLA-DQA1-204ENST00000422863 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
HLA-DQA1-204ENST00000422863 CLCN6P51797 869 aa12.5□□□□□ -0.41
HLA-DQA1-204ENST00000422863 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQA1-204ENST00000422863 ABCC1P33527 1531 aa12.5□□□□□ -0.41
HLA-DQA1-204ENST00000422863 ZNF142P52746 1687 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQA1-204ENST00000422863 CLIP1P30622 1438 aa12.49□□□□□ -0.41
HLA-DQA1-204ENST00000422863 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
HLA-DQA1-204ENST00000422863 CEP170BQ9Y4F5 1589 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQA1-204ENST00000422863 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
HLA-DQA1-204ENST00000422863 FMN1Q68DA7 1419 aa12.48□□□□□ -0.41
HLA-DQA1-204ENST00000422863 PKD2Q13563 968 aa12.48□□□□□ -0.41
HLA-DQA1-204ENST00000422863 NPATQ14207 1427 aa12.47□□□□□ -0.41
HLA-DQA1-204ENST00000422863 EEA1Q15075 1411 aa12.47□□□□□ -0.41
HLA-DQA1-204ENST00000422863 GGT6Q6P531 493 aa12.47□□□□□ -0.41
HLA-DQA1-204ENST00000422863 POLR1AO95602 1720 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQA1-204ENST00000422863 SAMD9LQ8IVG5 1584 aa12.47□□□□□ -0.41
HLA-DQA1-204ENST00000422863 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
HLA-DQA1-204ENST00000422863 HNRNPMP52272 730 aaKnown RBP eCLIP12.46□□□□□ -0.41
HLA-DQA1-204ENST00000422863 TOM1O60784 492 aa12.45□□□□□ -0.42
HLA-DQA1-204ENST00000422863 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
HLA-DQA1-204ENST00000422863 TCOF1Q13428 1488 aaKnown RBP12.45□□□□□ -0.42
HLA-DQA1-204ENST00000422863 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
HLA-DQA1-204ENST00000422863 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
HLA-DQA1-204ENST00000422863 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
HLA-DQA1-204ENST00000422863 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
HLA-DQA1-204ENST00000422863 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
HLA-DQA1-204ENST00000422863 ATXN8OSP0DMR3 200 aa12.43□□□□□ -0.42
HLA-DQA1-204ENST00000422863 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQA1-204ENST00000422863 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
HLA-DQA1-204ENST00000422863 CFAP65Q6ZU64 1925 aaKnown RBP12.4□□□□□ -0.42
HLA-DQA1-204ENST00000422863 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.43
HLA-DQA1-204ENST00000422863 STRCP1A6NGW2 1772 aa12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 ATP7AQ04656 1500 aa12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 POTEMA6NI47 508 aa12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 FBXO31Q5XUX0 539 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 A2MP01023 1474 aa12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
HLA-DQA1-204ENST00000422863 ALKQ9UM73 1620 aa12.38□□□□□ -0.43
HLA-DQA1-204ENST00000422863 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
HLA-DQA1-204ENST00000422863 CPS1P31327 1500 aa12.37□□□□□ -0.43
HLA-DQA1-204ENST00000422863 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQA1-204ENST00000422863 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
HLA-DQA1-204ENST00000422863 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
HLA-DQA1-204ENST00000422863 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQA1-204ENST00000422863 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
HLA-DQA1-204ENST00000422863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.35□□□□□ -0.43
HLA-DQA1-204ENST00000422863 GPATCH8Q9UKJ3 1502 aaKnown RBP12.35□□□□□ -0.43
HLA-DQA1-204ENST00000422863 RGS17Q9UGC6 210 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQA1-204ENST00000422863 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
HLA-DQA1-204ENST00000422863 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
HLA-DQA1-204ENST00000422863 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
HLA-DQA1-204ENST00000422863 POTEGQ6S5H5 508 aa12.32□□□□□ -0.44
HLA-DQA1-204ENST00000422863 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-204ENST00000422863 TNRQ92752 1358 aa12.31□□□□□ -0.44
HLA-DQA1-204ENST00000422863 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQA1-204ENST00000422863 IQGAP1P46940 1657 aa12.3□□□□□ -0.44
HLA-DQA1-204ENST00000422863 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
HLA-DQA1-204ENST00000422863 KIF3BO15066 747 aa12.29□□□□□ -0.44
HLA-DQA1-204ENST00000422863 ZBTB22O15209 634 aa12.29□□□□□ -0.44
HLA-DQA1-204ENST00000422863 THEMISQ8N1K5 641 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQA1-204ENST00000422863 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQA1-204ENST00000422863 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
HLA-DQA1-204ENST00000422863 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
HLA-DQA1-204ENST00000422863 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
HLA-DQA1-204ENST00000422863 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
HLA-DQA1-204ENST00000422863 LRRC7Q96NW7 1537 aa12.27□□□□□ -0.44
HLA-DQA1-204ENST00000422863 UGGT1Q9NYU2 1555 aa12.27□□□□□ -0.44
HLA-DQA1-204ENST00000422863 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.45
HLA-DQA1-204ENST00000422863 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
HLA-DQA1-204ENST00000422863 DEPDC5O75140 1603 aa12.26□□□□□ -0.45
HLA-DQA1-204ENST00000422863 POTEAQ6S8J7 498 aa12.26□□□□□ -0.45
HLA-DQA1-204ENST00000422863 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
HLA-DQA1-204ENST00000422863 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
HLA-DQA1-204ENST00000422863 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
HLA-DQA1-204ENST00000422863 DHX29Q7Z478 1369 aaKnown RBP12.25□□□□□ -0.45
HLA-DQA1-204ENST00000422863 MED14O60244 1454 aa12.24□□□□□ -0.45
HLA-DQA1-204ENST00000422863 PZPP20742 1482 aa12.24□□□□□ -0.45
HLA-DQA1-204ENST00000422863 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
HLA-DQA1-204ENST00000422863 FAM135AQ9P2D6 1515 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms