RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 POGKQ9P215 609 aa17.28■□□□□ 0.36
CALD1-205ENST00000422748 BCORL1Q5H9F3 1711 aa17.28■□□□□ 0.36
CALD1-205ENST00000422748 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.35
CALD1-205ENST00000422748 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.35
CALD1-205ENST00000422748 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
CALD1-205ENST00000422748 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
CALD1-205ENST00000422748 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
CALD1-205ENST00000422748 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
CALD1-205ENST00000422748 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
CALD1-205ENST00000422748 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
CALD1-205ENST00000422748 C14orf37Q86TY3 774 aa17.24■□□□□ 0.35
CALD1-205ENST00000422748 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
CALD1-205ENST00000422748 RRP9O43818 475 aaKnown RBP17.23■□□□□ 0.35
CALD1-205ENST00000422748 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
CALD1-205ENST00000422748 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
CALD1-205ENST00000422748 ANKRD30BQ9BXX2 1392 aa17.22■□□□□ 0.35
CALD1-205ENST00000422748 ARHGEF11O15085 1522 aa17.22■□□□□ 0.35
CALD1-205ENST00000422748 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
CALD1-205ENST00000422748 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
CALD1-205ENST00000422748 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
CALD1-205ENST00000422748 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
CALD1-205ENST00000422748 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
CALD1-205ENST00000422748 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
CALD1-205ENST00000422748 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.34
CALD1-205ENST00000422748 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
CALD1-205ENST00000422748 NUP153P49790 1475 aaKnown RBP17.2■□□□□ 0.34
CALD1-205ENST00000422748 USP47Q96K76 1375 aa17.2■□□□□ 0.34
CALD1-205ENST00000422748 CHD1O14646 1710 aa17.2■□□□□ 0.34
CALD1-205ENST00000422748 SUPT6HQ7KZ85 1726 aaKnown RBP17.2■□□□□ 0.34
CALD1-205ENST00000422748 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
CALD1-205ENST00000422748 RAPGEF6Q8TEU7 1601 aa17.19■□□□□ 0.34
CALD1-205ENST00000422748 KIF15Q9NS87 1388 aa17.18■□□□□ 0.34
CALD1-205ENST00000422748 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
CALD1-205ENST00000422748 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
CALD1-205ENST00000422748 CLCN1P35523 988 aa17.15■□□□□ 0.34
CALD1-205ENST00000422748 CENPQQ7L2Z9 268 aaPredicted RBP17.15■□□□□ 0.34
CALD1-205ENST00000422748 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
CALD1-205ENST00000422748 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
CALD1-205ENST00000422748 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
CALD1-205ENST00000422748 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
CALD1-205ENST00000422748 RALBP1Q15311 655 aa17.13■□□□□ 0.33
CALD1-205ENST00000422748 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
CALD1-205ENST00000422748 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
CALD1-205ENST00000422748 KDM5CP41229 1560 aa17.12■□□□□ 0.33
CALD1-205ENST00000422748 RGS3P49796 1198 aa17.12■□□□□ 0.33
CALD1-205ENST00000422748 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
CALD1-205ENST00000422748 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
CALD1-205ENST00000422748 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
CALD1-205ENST00000422748 ABCA8O94911 1581 aa17.09■□□□□ 0.33
CALD1-205ENST00000422748 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
CALD1-205ENST00000422748 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
CALD1-205ENST00000422748 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
CALD1-205ENST00000422748 MBD5Q9P267 1494 aa17.08■□□□□ 0.33
CALD1-205ENST00000422748 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
CALD1-205ENST00000422748 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
CALD1-205ENST00000422748 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
CALD1-205ENST00000422748 USP19O94966 1318 aa17.07■□□□□ 0.32
CALD1-205ENST00000422748 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
CALD1-205ENST00000422748 KIF14Q15058 1648 aa17.05■□□□□ 0.32
CALD1-205ENST00000422748 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
CALD1-205ENST00000422748 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
CALD1-205ENST00000422748 BECN1Q14457 450 aa17.02■□□□□ 0.32
CALD1-205ENST00000422748 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
CALD1-205ENST00000422748 VIRMAQ69YN4 1812 aaKnown RBP17.02■□□□□ 0.32
CALD1-205ENST00000422748 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.31
CALD1-205ENST00000422748 DHX37Q8IY37 1157 aaKnown RBP17.02■□□□□ 0.31
CALD1-205ENST00000422748 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
CALD1-205ENST00000422748 ANTXR1Q9H6X2 564 aa17.01■□□□□ 0.31
CALD1-205ENST00000422748 E9PCH4 1651 aa17.01■□□□□ 0.31
CALD1-205ENST00000422748 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
CALD1-205ENST00000422748 PTPRGP23470 1445 aa17■□□□□ 0.31
CALD1-205ENST00000422748 PARD3Q8TEW0 1356 aa17■□□□□ 0.31
CALD1-205ENST00000422748 ATP10BO94823 1461 aa17■□□□□ 0.31
CALD1-205ENST00000422748 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
CALD1-205ENST00000422748 SEC24BO95487 1268 aa16.99■□□□□ 0.31
CALD1-205ENST00000422748 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
CALD1-205ENST00000422748 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
CALD1-205ENST00000422748 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
CALD1-205ENST00000422748 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
CALD1-205ENST00000422748 ERBB4Q15303 1308 aa16.96■□□□□ 0.31
CALD1-205ENST00000422748 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.31
CALD1-205ENST00000422748 FGD1P98174 961 aa16.96■□□□□ 0.31
CALD1-205ENST00000422748 ESPNB1AK53 854 aa16.95■□□□□ 0.3
CALD1-205ENST00000422748 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
CALD1-205ENST00000422748 PZPP20742 1482 aa16.94■□□□□ 0.3
CALD1-205ENST00000422748 PLEKHH2Q8IVE3 1493 aa16.94■□□□□ 0.3
CALD1-205ENST00000422748 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
CALD1-205ENST00000422748 PDCL3Q9H2J4 239 aa16.93■□□□□ 0.3
CALD1-205ENST00000422748 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
CALD1-205ENST00000422748 NLRP1Q9C000 1473 aa16.93■□□□□ 0.3
CALD1-205ENST00000422748 DAPK1P53355 1430 aa16.93■□□□□ 0.3
CALD1-205ENST00000422748 MCM4P33991 863 aa16.93■□□□□ 0.3
CALD1-205ENST00000422748 MRE11P49959 708 aa16.93■□□□□ 0.3
CALD1-205ENST00000422748 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
CALD1-205ENST00000422748 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
CALD1-205ENST00000422748 TPM2P07951 284 aa16.92■□□□□ 0.3
CALD1-205ENST00000422748 INSRP06213 1382 aa16.91■□□□□ 0.3
CALD1-205ENST00000422748 DUSP27Q5VZP5 1158 aa16.91■□□□□ 0.3
CALD1-205ENST00000422748 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
CALD1-205ENST00000422748 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms