RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 MAST1Q9Y2H9 1570 aa29.82■■■□□ 2.36
VARS2-202ENST00000421263 CEP170BQ9Y4F5 1589 aaPredicted RBP29.82■■■□□ 2.36
VARS2-202ENST00000421263 PLA2R1Q13018 1463 aa29.81■■■□□ 2.36
VARS2-202ENST00000421263 NCKAP5LQ9HCH0 1330 aa29.81■■■□□ 2.36
VARS2-202ENST00000421263 WASHC2CQ9Y4E1 1318 aa29.8■■■□□ 2.36
VARS2-202ENST00000421263 PKD2Q13563 968 aa29.8■■■□□ 2.36
VARS2-202ENST00000421263 LTBP4Q8N2S1 1624 aa29.8■■■□□ 2.36
VARS2-202ENST00000421263 KDM5DQ9BY66 1539 aa29.8■■■□□ 2.36
VARS2-202ENST00000421263 FBXO31Q5XUX0 539 aaPredicted RBP29.79■■■□□ 2.36
VARS2-202ENST00000421263 A2ML1A8K2U0 1454 aa29.77■■■□□ 2.36
VARS2-202ENST00000421263 PZPP20742 1482 aa29.77■■■□□ 2.36
VARS2-202ENST00000421263 TCOF1Q13428 1488 aaKnown RBP29.77■■■□□ 2.36
VARS2-202ENST00000421263 DNMT1P26358 1616 aaKnown RBP29.73■■■□□ 2.35
VARS2-202ENST00000421263 TNRQ92752 1358 aa29.73■■■□□ 2.35
VARS2-202ENST00000421263 APLP2Q06481 763 aa29.72■■■□□ 2.35
VARS2-202ENST00000421263 RNF17Q9BXT8 1623 aaKnown RBP29.7■■■□□ 2.34
VARS2-202ENST00000421263 IQSEC2Q5JU85 1478 aa29.68■■■□□ 2.34
VARS2-202ENST00000421263 EIF2AK4Q9P2K8 1649 aaKnown RBP29.67■■■□□ 2.34
VARS2-202ENST00000421263 ABCC5O15440 1437 aa29.64■■■□□ 2.34
VARS2-202ENST00000421263 ZNF335Q9H4Z2 1342 aaPredicted RBP29.64■■■□□ 2.34
VARS2-202ENST00000421263 ABCC3O15438 1527 aa29.63■■■□□ 2.33
VARS2-202ENST00000421263 DUOX2Q9NRD8 1548 aa29.62■■■□□ 2.33
VARS2-202ENST00000421263 PTPN23Q9H3S7 1636 aa29.62■■■□□ 2.33
VARS2-202ENST00000421263 MROH1Q8NDA8 1641 aa29.61■■■□□ 2.33
VARS2-202ENST00000421263 NLRP1Q9C000 1473 aa29.61■■■□□ 2.33
VARS2-202ENST00000421263 SHANK2Q9UPX8 1470 aa29.61■■■□□ 2.33
VARS2-202ENST00000421263 ZC3H13Q5T200 1668 aaKnown RBP29.6■■■□□ 2.33
VARS2-202ENST00000421263 THEMISQ8N1K5 641 aaPredicted RBP29.59■■■□□ 2.33
VARS2-202ENST00000421263 FGD6Q6ZV73 1430 aa29.58■■■□□ 2.33
VARS2-202ENST00000421263 KIF15Q9NS87 1388 aa29.57■■■□□ 2.32
VARS2-202ENST00000421263 SPATA31D1Q6ZQQ2 1576 aa29.56■■■□□ 2.32
VARS2-202ENST00000421263 DAPK1P53355 1430 aa29.56■■■□□ 2.32
VARS2-202ENST00000421263 CROCC2H7BZ55 1655 aa29.56■■■□□ 2.32
VARS2-202ENST00000421263 RRP7BPQ9NSQ0 103 aa29.55■■■□□ 2.32
VARS2-202ENST00000421263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.54■■■□□ 2.32
VARS2-202ENST00000421263 ANKLE2Q86XL3 938 aa29.54■■■□□ 2.32
VARS2-202ENST00000421263 NEURL4Q96JN8 1562 aa29.54■■■□□ 2.32
VARS2-202ENST00000421263 UGGT1Q9NYU2 1555 aa29.54■■■□□ 2.32
VARS2-202ENST00000421263 ERBINQ96RT1 1412 aa29.53■■■□□ 2.32
VARS2-202ENST00000421263 POLR1AO95602 1720 aaPredicted RBP29.52■■■□□ 2.32
VARS2-202ENST00000421263 ERVK-7P63135 1459 aa29.51■■■□□ 2.31
VARS2-202ENST00000421263 CEP152O94986 1710 aa29.49■■■□□ 2.31
VARS2-202ENST00000421263 ARHGAP31Q2M1Z3 1444 aa29.48■■■□□ 2.31
VARS2-202ENST00000421263 PRDM15P57071 1507 aaPredicted RBP29.48■■■□□ 2.31
VARS2-202ENST00000421263 MED14O60244 1454 aa29.48■■■□□ 2.31
VARS2-202ENST00000421263 DEPDC5O75140 1603 aa29.45■■■□□ 2.31
VARS2-202ENST00000421263 ANKRD30AQ9BXX3 1397 aa29.44■■■□□ 2.3
VARS2-202ENST00000421263 CHIC2Q9UKJ5 165 aa29.43■■■□□ 2.3
VARS2-202ENST00000421263 CFAP65Q6ZU64 1925 aaKnown RBP29.42■■■□□ 2.3
VARS2-202ENST00000421263 NPHP4O75161 1426 aaPredicted RBP29.42■■■□□ 2.3
VARS2-202ENST00000421263 UBAP1LF5GYI3 381 aa29.4■■■□□ 2.3
VARS2-202ENST00000421263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.4■■■□□ 2.32e-8■□□□□ 8.9
VARS2-202ENST00000421263 CPS1P31327 1500 aa29.38■■■□□ 2.29
VARS2-202ENST00000421263 KANK1Q14678 1352 aa29.37■■■□□ 2.29
VARS2-202ENST00000421263 ADGRL2O95490 1459 aa29.36■■■□□ 2.29
VARS2-202ENST00000421263 VWDEQ8N2E2 1590 aa29.36■■■□□ 2.29
VARS2-202ENST00000421263 UBR1Q8IWV7 1749 aa29.36■■■□□ 2.29
VARS2-202ENST00000421263 LMTK2Q8IWU2 1503 aa29.35■■■□□ 2.29
VARS2-202ENST00000421263 IQGAP1P46940 1657 aa29.32■■■□□ 2.28
VARS2-202ENST00000421263 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
VARS2-202ENST00000421263 ARHGAP23Q9P227 1491 aa29.3■■■□□ 2.28
VARS2-202ENST00000421263 SLIT1O75093 1534 aa29.29■■■□□ 2.28
VARS2-202ENST00000421263 LTKP29376 864 aa29.28■■■□□ 2.28
VARS2-202ENST00000421263 SCAF11Q99590 1463 aaKnown RBP29.26■■■□□ 2.27
VARS2-202ENST00000421263 DISP3Q9P2K9 1392 aa29.26■■■□□ 2.27
VARS2-202ENST00000421263 TXNDC2Q86VQ3 553 aa29.25■■■□□ 2.27
VARS2-202ENST00000421263 TOM1O60784 492 aa29.24■■■□□ 2.27
VARS2-202ENST00000421263 IDI1Q13907 227 aa29.24■■■□□ 2.27
VARS2-202ENST00000421263 ANKRD50Q9ULJ7 1429 aa29.23■■■□□ 2.27
VARS2-202ENST00000421263 PIK3C2BO00750 1634 aa29.23■■■□□ 2.27
VARS2-202ENST00000421263 NOS1P29475 1434 aa29.22■■■□□ 2.27
VARS2-202ENST00000421263 STRCP1A6NGW2 1772 aa29.21■■■□□ 2.27
VARS2-202ENST00000421263 TMEM2Q9UHN6 1383 aa29.2■■■□□ 2.26
VARS2-202ENST00000421263 EFCAB6Q5THR3 1501 aa29.2■■■□□ 2.26
VARS2-202ENST00000421263 KDM5AP29375 1690 aaKnown RBP29.19■■■□□ 2.26
VARS2-202ENST00000421263 EID1Q9Y6B2 187 aa29.19■■■□□ 2.26
VARS2-202ENST00000421263 SYNMO15061 1565 aa29.18■■■□□ 2.26
VARS2-202ENST00000421263 LRRC7Q96NW7 1537 aa29.17■■■□□ 2.26
VARS2-202ENST00000421263 STAG3Q9UJ98 1225 aa29.16■■■□□ 2.26
VARS2-202ENST00000421263 ILDR2Q71H61 639 aa29.15■■■□□ 2.26
VARS2-202ENST00000421263 ALKQ9UM73 1620 aa29.14■■■□□ 2.26
VARS2-202ENST00000421263 PIP4K2BP78356 416 aa29.14■■■□□ 2.26
VARS2-202ENST00000421263 SLC52A1Q9NWF4 448 aa29.14■■■□□ 2.26
VARS2-202ENST00000421263 RPRD2Q5VT52 1461 aaKnown RBP29.13■■■□□ 2.25
VARS2-202ENST00000421263 ROCK1Q13464 1354 aa29.13■■■□□ 2.25
VARS2-202ENST00000421263 HSPA1LP34931 641 aa29.11■■■□□ 2.25
VARS2-202ENST00000421263 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
VARS2-202ENST00000421263 TET3O43151 1660 aa29.06■■■□□ 2.24
VARS2-202ENST00000421263 UNC13BO14795 1591 aa29.05■■■□□ 2.24
VARS2-202ENST00000421263 ADGRB3O60242 1522 aa29.05■■■□□ 2.24
VARS2-202ENST00000421263 GCC2Q8IWJ2 1684 aa29■■■□□ 2.23
VARS2-202ENST00000421263 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
VARS2-202ENST00000421263 KCNA6P17658 529 aa28.99■■■□□ 2.23
VARS2-202ENST00000421263 XIRP1Q702N8 1843 aaKnown RBP28.97■■■□□ 2.23
VARS2-202ENST00000421263 SLC26A8Q96RN1 970 aa28.97■■■□□ 2.23
VARS2-202ENST00000421263 ZFYVE9O95405 1425 aa28.95■■■□□ 2.23
VARS2-202ENST00000421263 SOCS7O14512 581 aa28.95■■■□□ 2.22
VARS2-202ENST00000421263 ITGAEP38570 1179 aa28.95■■■□□ 2.22
VARS2-202ENST00000421263 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
VARS2-202ENST00000421263 E9PCH4 1651 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms