RNA–Protein interactions for RNA: ENST00000421234.5

LINC00475-204, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-204ENST00000421234 PLXNC1O60486 1568 aa20.24■□□□□ 0.83
LINC00475-204ENST00000421234 A2MP01023 1474 aa20.24■□□□□ 0.83
LINC00475-204ENST00000421234 ARHGEF5Q12774 1597 aa20.23■□□□□ 0.83
LINC00475-204ENST00000421234 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
LINC00475-204ENST00000421234 ESF1Q9H501 851 aaKnown RBP20.23■□□□□ 0.83
LINC00475-204ENST00000421234 MYOM3Q5VTT5 1437 aa20.22■□□□□ 0.83
LINC00475-204ENST00000421234 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
LINC00475-204ENST00000421234 C3P01024 1663 aa20.2■□□□□ 0.82
LINC00475-204ENST00000421234 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
LINC00475-204ENST00000421234 PREX1Q8TCU6 1659 aa20.19■□□□□ 0.82
LINC00475-204ENST00000421234 LMTK3Q96Q04 1460 aa20.19■□□□□ 0.82
LINC00475-204ENST00000421234 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
LINC00475-204ENST00000421234 MROH2AA6NES4 1674 aa20.18■□□□□ 0.82
LINC00475-204ENST00000421234 CNTLNQ9NXG0 1405 aa20.17■□□□□ 0.82
LINC00475-204ENST00000421234 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
LINC00475-204ENST00000421234 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
LINC00475-204ENST00000421234 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
LINC00475-204ENST00000421234 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
LINC00475-204ENST00000421234 PTPN23Q9H3S7 1636 aa20.15■□□□□ 0.82
LINC00475-204ENST00000421234 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
LINC00475-204ENST00000421234 MAST1Q9Y2H9 1570 aa20.12■□□□□ 0.81
LINC00475-204ENST00000421234 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
LINC00475-204ENST00000421234 GGT6Q6P531 493 aa20.11■□□□□ 0.81
LINC00475-204ENST00000421234 DHX29Q7Z478 1369 aaKnown RBP20.1■□□□□ 0.81
LINC00475-204ENST00000421234 UHRF1BP1Q6BDS2 1440 aa20.09■□□□□ 0.81
LINC00475-204ENST00000421234 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.81
LINC00475-204ENST00000421234 HSPA2P54652 639 aa20.07■□□□□ 0.8
LINC00475-204ENST00000421234 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
LINC00475-204ENST00000421234 FGD6Q6ZV73 1430 aa20.07■□□□□ 0.8
LINC00475-204ENST00000421234 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
LINC00475-204ENST00000421234 KIF3BO15066 747 aa20.05■□□□□ 0.8
LINC00475-204ENST00000421234 REM2Q8IYK8 340 aaPredicted RBP20.04■□□□□ 0.8
LINC00475-204ENST00000421234 PIP4P2Q8N4L2 257 aa20.04■□□□□ 0.8
LINC00475-204ENST00000421234 ZMYM3Q14202 1370 aa20.04■□□□□ 0.8
LINC00475-204ENST00000421234 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
LINC00475-204ENST00000421234 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
LINC00475-204ENST00000421234 SHANK2Q9UPX8 1470 aa20.03■□□□□ 0.8
LINC00475-204ENST00000421234 KDM5DQ9BY66 1539 aa20.02■□□□□ 0.79
LINC00475-204ENST00000421234 FAM135AQ9P2D6 1515 aa20.02■□□□□ 0.79
LINC00475-204ENST00000421234 NPATQ14207 1427 aa20.02■□□□□ 0.79
LINC00475-204ENST00000421234 DAPK1P53355 1430 aa20.01■□□□□ 0.79
LINC00475-204ENST00000421234 RNF17Q9BXT8 1623 aaKnown RBP20■□□□□ 0.79
LINC00475-204ENST00000421234 DUOX2Q9NRD8 1548 aa19.99■□□□□ 0.79
LINC00475-204ENST00000421234 ABCC5O15440 1437 aa19.99■□□□□ 0.79
LINC00475-204ENST00000421234 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
LINC00475-204ENST00000421234 ATF5Q9Y2D1 282 aaPredicted RBP19.98■□□□□ 0.79
LINC00475-204ENST00000421234 ZC3H13Q5T200 1668 aaKnown RBP19.97■□□□□ 0.79
LINC00475-204ENST00000421234 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
LINC00475-204ENST00000421234 KIF15Q9NS87 1388 aa19.95■□□□□ 0.79
LINC00475-204ENST00000421234 WASHC2CQ9Y4E1 1318 aa19.95■□□□□ 0.78
LINC00475-204ENST00000421234 STRCQ7RTU9 1775 aa19.95■□□□□ 0.78
LINC00475-204ENST00000421234 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
LINC00475-204ENST00000421234 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
LINC00475-204ENST00000421234 CEP152O94986 1710 aa19.93■□□□□ 0.78
LINC00475-204ENST00000421234 ERBINQ96RT1 1412 aa19.92■□□□□ 0.78
LINC00475-204ENST00000421234 RRP7BPQ9NSQ0 103 aa19.91■□□□□ 0.78
LINC00475-204ENST00000421234 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
LINC00475-204ENST00000421234 PZPP20742 1482 aa19.91■□□□□ 0.78
LINC00475-204ENST00000421234 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
LINC00475-204ENST00000421234 MROH1Q8NDA8 1641 aa19.91■□□□□ 0.78
LINC00475-204ENST00000421234 HAX1O00165 279 aa19.9■□□□□ 0.78
LINC00475-204ENST00000421234 CHIC2Q9UKJ5 165 aa19.9■□□□□ 0.78
LINC00475-204ENST00000421234 ABCC3O15438 1527 aa19.89■□□□□ 0.77
LINC00475-204ENST00000421234 CAMSAP1Q5T5Y3 1602 aa19.88■□□□□ 0.77
LINC00475-204ENST00000421234 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
LINC00475-204ENST00000421234 PRDM15P57071 1507 aaPredicted RBP19.86■□□□□ 0.77
LINC00475-204ENST00000421234 CFAP65Q6ZU64 1925 aaKnown RBP19.86■□□□□ 0.77
LINC00475-204ENST00000421234 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
LINC00475-204ENST00000421234 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
LINC00475-204ENST00000421234 TNRQ92752 1358 aa19.85■□□□□ 0.77
LINC00475-204ENST00000421234 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
LINC00475-204ENST00000421234 PITPNM1O00562 1244 aa19.84■□□□□ 0.77
LINC00475-204ENST00000421234 A2ML1A8K2U0 1454 aa19.83■□□□□ 0.76
LINC00475-204ENST00000421234 FBXO31Q5XUX0 539 aaPredicted RBP19.82■□□□□ 0.76
LINC00475-204ENST00000421234 FOXD4L1Q9NU39 408 aa19.81■□□□□ 0.76
LINC00475-204ENST00000421234 KANK1Q14678 1352 aa19.81■□□□□ 0.76
LINC00475-204ENST00000421234 PLA2R1Q13018 1463 aa19.8■□□□□ 0.76
LINC00475-204ENST00000421234 SPATA31D1Q6ZQQ2 1576 aa19.79■□□□□ 0.76
LINC00475-204ENST00000421234 PTPRTO14522 1441 aa19.79■□□□□ 0.76
LINC00475-204ENST00000421234 FXR2P51116 673 aaKnown RBP eCLIP19.79■□□□□ 0.76
LINC00475-204ENST00000421234 ILDR1Q86SU0 546 aaPredicted RBP19.79■□□□□ 0.76
LINC00475-204ENST00000421234 POLR1AO95602 1720 aaPredicted RBP19.79■□□□□ 0.76
LINC00475-204ENST00000421234 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
LINC00475-204ENST00000421234 ERVK-7P63135 1459 aa19.78■□□□□ 0.76
LINC00475-204ENST00000421234 ANKRD50Q9ULJ7 1429 aa19.76■□□□□ 0.75
LINC00475-204ENST00000421234 UGGT1Q9NYU2 1555 aa19.75■□□□□ 0.75
LINC00475-204ENST00000421234 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
LINC00475-204ENST00000421234 NCKAP5LQ9HCH0 1330 aa19.74■□□□□ 0.75
LINC00475-204ENST00000421234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC00475-204ENST00000421234 ITGAEP38570 1179 aa19.73■□□□□ 0.75
LINC00475-204ENST00000421234 PKD2Q13563 968 aa19.73■□□□□ 0.75
LINC00475-204ENST00000421234 ARHGAP31Q2M1Z3 1444 aa19.73■□□□□ 0.75
LINC00475-204ENST00000421234 LMTK2Q8IWU2 1503 aa19.71■□□□□ 0.75
LINC00475-204ENST00000421234 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
LINC00475-204ENST00000421234 FBXO41Q8TF61 875 aa19.7■□□□□ 0.74
LINC00475-204ENST00000421234 EFCAB6Q5THR3 1501 aa19.7■□□□□ 0.74
LINC00475-204ENST00000421234 UNC13BO14795 1591 aa19.7■□□□□ 0.74
LINC00475-204ENST00000421234 UBR1Q8IWV7 1749 aa19.69■□□□□ 0.74
LINC00475-204ENST00000421234 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
LINC00475-204ENST00000421234 CERKQ8TCT0 537 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms