RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
CHRD-204ENST00000420973 NUTM2DQ5VT03 806 aaPredicted RBP19.45■□□□□ 0.7
CHRD-204ENST00000420973 USP47Q96K76 1375 aa19.45■□□□□ 0.7
CHRD-204ENST00000420973 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
CHRD-204ENST00000420973 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
CHRD-204ENST00000420973 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
CHRD-204ENST00000420973 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
CHRD-204ENST00000420973 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
CHRD-204ENST00000420973 NEFMP07197 916 aa19.42■□□□□ 0.7
CHRD-204ENST00000420973 PZPP20742 1482 aa19.41■□□□□ 0.7
CHRD-204ENST00000420973 ABCA8O94911 1581 aa19.41■□□□□ 0.7
CHRD-204ENST00000420973 CCDC7Q96M83 1385 aa19.41■□□□□ 0.7
CHRD-204ENST00000420973 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
CHRD-204ENST00000420973 CC2D1BQ5T0F9 858 aaKnown RBP19.4■□□□□ 0.7
CHRD-204ENST00000420973 TMC1Q8TDI8 760 aa19.4■□□□□ 0.7
CHRD-204ENST00000420973 PLEKHH2Q8IVE3 1493 aa19.4■□□□□ 0.7
CHRD-204ENST00000420973 RPRD2Q5VT52 1461 aaKnown RBP19.39■□□□□ 0.7
CHRD-204ENST00000420973 CCDC144AA2RUR9 1427 aa19.39■□□□□ 0.69
CHRD-204ENST00000420973 PRKRIP1Q9H875 184 aaPredicted RBP19.39■□□□□ 0.69
CHRD-204ENST00000420973 CCER2I3L3R5 266 aa19.39■□□□□ 0.69
CHRD-204ENST00000420973 RSPH4AQ5TD94 716 aa19.38■□□□□ 0.69
CHRD-204ENST00000420973 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
CHRD-204ENST00000420973 CCDC141Q6ZP82 1450 aa19.37■□□□□ 0.69
CHRD-204ENST00000420973 ABCC10Q5T3U5 1492 aa19.37■□□□□ 0.69
CHRD-204ENST00000420973 SCAPERQ9BY12 1400 aa19.36■□□□□ 0.69
CHRD-204ENST00000420973 LAS1LQ9Y4W2 734 aaKnown RBP19.36■□□□□ 0.69
CHRD-204ENST00000420973 RAPGEF3O95398 923 aa19.35■□□□□ 0.69
CHRD-204ENST00000420973 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
CHRD-204ENST00000420973 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
CHRD-204ENST00000420973 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.69
CHRD-204ENST00000420973 PDE4CQ08493 712 aa19.33■□□□□ 0.68
CHRD-204ENST00000420973 MLECQ14165 292 aa19.33■□□□□ 0.68
CHRD-204ENST00000420973 CDC42BPAQ5VT25 1732 aa19.29■□□□□ 0.68
CHRD-204ENST00000420973 TTC37Q6PGP7 1564 aa19.29■□□□□ 0.68
CHRD-204ENST00000420973 SAFB2Q14151 953 aaKnown RBP eCLIP19.29■□□□□ 0.68
CHRD-204ENST00000420973 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
CHRD-204ENST00000420973 MBD5Q9P267 1494 aa19.29■□□□□ 0.68
CHRD-204ENST00000420973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.27■□□□□ 0.67
CHRD-204ENST00000420973 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
CHRD-204ENST00000420973 CNTLNQ9NXG0 1405 aa19.26■□□□□ 0.67
CHRD-204ENST00000420973 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
CHRD-204ENST00000420973 TEX14Q8IWB6 1497 aa19.25■□□□□ 0.67
CHRD-204ENST00000420973 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
CHRD-204ENST00000420973 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
CHRD-204ENST00000420973 RBM10P98175 930 aaKnown RBP19.22■□□□□ 0.67
CHRD-204ENST00000420973 IPO9Q96P70 1041 aaKnown RBP19.22■□□□□ 0.67
CHRD-204ENST00000420973 TNNT2P45379 298 aaPredicted RBP19.22■□□□□ 0.67
CHRD-204ENST00000420973 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
CHRD-204ENST00000420973 PLCH2O75038 1416 aa19.21■□□□□ 0.67
CHRD-204ENST00000420973 WASHC2CQ9Y4E1 1318 aa19.19■□□□□ 0.66
CHRD-204ENST00000420973 ADGRL2O95490 1459 aa19.19■□□□□ 0.66
CHRD-204ENST00000420973 CFAP70Q5T0N1 1121 aa19.19■□□□□ 0.66
CHRD-204ENST00000420973 PANK3Q9H999 370 aa19.19■□□□□ 0.66
CHRD-204ENST00000420973 KANK1Q14678 1352 aa19.19■□□□□ 0.66
CHRD-204ENST00000420973 HSP90AA2PQ14568 343 aaPredicted RBP19.18■□□□□ 0.66
CHRD-204ENST00000420973 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
CHRD-204ENST00000420973 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
CHRD-204ENST00000420973 FANCAO15360 1455 aa19.18■□□□□ 0.66
CHRD-204ENST00000420973 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
CHRD-204ENST00000420973 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
CHRD-204ENST00000420973 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
CHRD-204ENST00000420973 TMEM132EQ6IEE7 984 aa19.16■□□□□ 0.66
CHRD-204ENST00000420973 STK26Q9P289 416 aa19.16■□□□□ 0.66
CHRD-204ENST00000420973 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
CHRD-204ENST00000420973 TMF1P82094 1093 aa19.15■□□□□ 0.66
CHRD-204ENST00000420973 ADGRL1O94910 1474 aa19.14■□□□□ 0.66
CHRD-204ENST00000420973 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
CHRD-204ENST00000420973 PPP4R2Q9NY27 417 aa19.14■□□□□ 0.65
CHRD-204ENST00000420973 FGD1P98174 961 aa19.12■□□□□ 0.65
CHRD-204ENST00000420973 NAP1L5Q96NT1 182 aaPredicted RBP19.12■□□□□ 0.65
CHRD-204ENST00000420973 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
CHRD-204ENST00000420973 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
CHRD-204ENST00000420973 CFAP65Q6ZU64 1925 aaKnown RBP19.11■□□□□ 0.65
CHRD-204ENST00000420973 PDIA4P13667 645 aaKnown RBP19.1■□□□□ 0.65
CHRD-204ENST00000420973 KNSTRNQ9Y448 316 aa19.1■□□□□ 0.65
CHRD-204ENST00000420973 ZCCHC11Q5TAX3 1644 aaKnown RBP19.1■□□□□ 0.65
CHRD-204ENST00000420973 ADCY10Q96PN6 1610 aa19.1■□□□□ 0.65
CHRD-204ENST00000420973 WDR7Q9Y4E6 1490 aa19.1■□□□□ 0.65
CHRD-204ENST00000420973 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
CHRD-204ENST00000420973 CD109Q6YHK3 1445 aa19.09■□□□□ 0.65
CHRD-204ENST00000420973 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
CHRD-204ENST00000420973 AAMPQ13685 434 aa19.06■□□□□ 0.64
CHRD-204ENST00000420973 GSE1Q14687 1217 aa19.06■□□□□ 0.64
CHRD-204ENST00000420973 ARID4BQ4LE39 1312 aaPredicted RBP19.05■□□□□ 0.64
CHRD-204ENST00000420973 ADGRF5Q8IZF2 1346 aa19.05■□□□□ 0.64
CHRD-204ENST00000420973 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
CHRD-204ENST00000420973 DISP3Q9P2K9 1392 aa19.05■□□□□ 0.64
CHRD-204ENST00000420973 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
CHRD-204ENST00000420973 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
CHRD-204ENST00000420973 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
CHRD-204ENST00000420973 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
CHRD-204ENST00000420973 NEUROD2Q15784 382 aa19.02■□□□□ 0.63
CHRD-204ENST00000420973 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
CHRD-204ENST00000420973 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
CHRD-204ENST00000420973 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
CHRD-204ENST00000420973 A2MP01023 1474 aa19■□□□□ 0.63
CHRD-204ENST00000420973 ESF1Q9H501 851 aaKnown RBP19■□□□□ 0.63
CHRD-204ENST00000420973 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
CHRD-204ENST00000420973 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
CHRD-204ENST00000420973 ARHGEF5Q12774 1597 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms