RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 HECW2Q9P2P5 1572 aa30.25■■■□□ 2.43
GPC1-202ENST00000420138 MYT1LQ9UL68 1186 aa30.24■■■□□ 2.43
GPC1-202ENST00000420138 RAPGEF3O95398 923 aa30.19■■■□□ 2.42
GPC1-202ENST00000420138 MLH3Q9UHC1 1453 aa30.19■■■□□ 2.42
GPC1-202ENST00000420138 FRMPD1Q5SYB0 1578 aa30.18■■■□□ 2.42
GPC1-202ENST00000420138 IQGAP3Q86VI3 1631 aa30.17■■■□□ 2.42
GPC1-202ENST00000420138 DHX29Q7Z478 1369 aaKnown RBP30.16■■■□□ 2.42
GPC1-202ENST00000420138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.15■■■□□ 2.42
GPC1-202ENST00000420138 TRHP20396 242 aaPredicted RBP30.14■■■□□ 2.42
GPC1-202ENST00000420138 L3MBTL2Q969R5 705 aa30.12■■■□□ 2.41
GPC1-202ENST00000420138 ABCA6Q8N139 1617 aa30.12■■■□□ 2.41
GPC1-202ENST00000420138 ZMYM4Q5VZL5 1548 aa30.1■■■□□ 2.41
GPC1-202ENST00000420138 DEPDC5O75140 1603 aa30.09■■■□□ 2.41
GPC1-202ENST00000420138 EIF2AK4Q9P2K8 1649 aaKnown RBP30.08■■■□□ 2.41
GPC1-202ENST00000420138 DIEXFQ68CQ4 756 aaKnown RBP30.06■■■□□ 2.4
GPC1-202ENST00000420138 DIP2CQ9Y2E4 1556 aa30.05■■■□□ 2.4
GPC1-202ENST00000420138 A2MP01023 1474 aa30.04■■■□□ 2.4
GPC1-202ENST00000420138 PLA2R1Q13018 1463 aa30.04■■■□□ 2.4
GPC1-202ENST00000420138 VWDEQ8N2E2 1590 aa30.03■■■□□ 2.4
GPC1-202ENST00000420138 KIF3BO15066 747 aa30.02■■■□□ 2.4
GPC1-202ENST00000420138 MROH1Q8NDA8 1641 aa30.02■■■□□ 2.4
GPC1-202ENST00000420138 COL17A1Q9UMD9 1497 aaPredicted RBP30.01■■■□□ 2.39
GPC1-202ENST00000420138 YEATS2Q9ULM3 1422 aa29.99■■■□□ 2.39
GPC1-202ENST00000420138 PRDM15P57071 1507 aaPredicted RBP29.99■■■□□ 2.39
GPC1-202ENST00000420138 ATP10AO60312 1499 aa29.98■■■□□ 2.39
GPC1-202ENST00000420138 BCORL1Q5H9F3 1711 aa29.94■■■□□ 2.38
GPC1-202ENST00000420138 NBPF8Q3BBV2 869 aa29.93■■■□□ 2.38
GPC1-202ENST00000420138 RNF17Q9BXT8 1623 aaKnown RBP29.92■■■□□ 2.38
GPC1-202ENST00000420138 KANK1Q14678 1352 aa29.91■■■□□ 2.38
GPC1-202ENST00000420138 CCDC144AA2RUR9 1427 aa29.9■■■□□ 2.38
GPC1-202ENST00000420138 E9PCH4 1651 aa29.9■■■□□ 2.38
GPC1-202ENST00000420138 TET3O43151 1660 aa29.89■■■□□ 2.37
GPC1-202ENST00000420138 ARHGEF40Q8TER5 1519 aa29.87■■■□□ 2.37
GPC1-202ENST00000420138 PTPRTO14522 1441 aa29.85■■■□□ 2.37
GPC1-202ENST00000420138 LMTK2Q8IWU2 1503 aa29.85■■■□□ 2.37
GPC1-202ENST00000420138 REREQ9P2R6 1566 aa29.84■■■□□ 2.37
GPC1-202ENST00000420138 UHRF1BP1Q6BDS2 1440 aa29.81■■■□□ 2.36
GPC1-202ENST00000420138 CEP152O94986 1710 aa29.81■■■□□ 2.36
GPC1-202ENST00000420138 TRPM2O94759 1503 aa29.8■■■□□ 2.36
GPC1-202ENST00000420138 HIRIP3Q9BW71 556 aaPredicted RBP29.8■■■□□ 2.36
GPC1-202ENST00000420138 EFCAB6Q5THR3 1501 aa29.79■■■□□ 2.36
GPC1-202ENST00000420138 GGT6Q6P531 493 aa29.77■■■□□ 2.36
GPC1-202ENST00000420138 SIGLEC1Q9BZZ2 1709 aa29.75■■■□□ 2.35
GPC1-202ENST00000420138 SPHKAPQ2M3C7 1700 aa29.73■■■□□ 2.35
GPC1-202ENST00000420138 AGLP35573 1532 aa29.73■■■□□ 2.35
GPC1-202ENST00000420138 SPATA31E1Q6ZUB1 1445 aa29.72■■■□□ 2.35
GPC1-202ENST00000420138 DCAF11Q8TEB1 546 aa29.72■■■□□ 2.35
GPC1-202ENST00000420138 ABCC3O15438 1527 aa29.72■■■□□ 2.35
GPC1-202ENST00000420138 HSPA5P11021 654 aaKnown RBP29.71■■■□□ 2.35
GPC1-202ENST00000420138 ZC3H13Q5T200 1668 aaKnown RBP29.7■■■□□ 2.35
GPC1-202ENST00000420138 CLTCL1P53675 1640 aa29.69■■■□□ 2.34
GPC1-202ENST00000420138 RGL3Q3MIN7 710 aa29.68■■■□□ 2.34
GPC1-202ENST00000420138 EIF4G2P78344 907 aaKnown RBP eCLIP29.68■■■□□ 2.34
GPC1-202ENST00000420138 NPATQ14207 1427 aa29.67■■■□□ 2.34
GPC1-202ENST00000420138 KDM2AQ9Y2K7 1162 aa29.67■■■□□ 2.34
GPC1-202ENST00000420138 ZNF326Q5BKZ1 582 aaKnown RBP29.66■■■□□ 2.34
GPC1-202ENST00000420138 RALGAPBQ86X10 1494 aa29.66■■■□□ 2.34
GPC1-202ENST00000420138 CAMSAP1Q5T5Y3 1602 aa29.66■■■□□ 2.34
GPC1-202ENST00000420138 WASHC2CQ9Y4E1 1318 aa29.65■■■□□ 2.34
GPC1-202ENST00000420138 PRAG1Q86YV5 1406 aa29.64■■■□□ 2.33
GPC1-202ENST00000420138 MIER1Q8N108 512 aa29.62■■■□□ 2.33
GPC1-202ENST00000420138 UGGT1Q9NYU2 1555 aa29.61■■■□□ 2.33
GPC1-202ENST00000420138 CFAP65Q6ZU64 1925 aaKnown RBP29.6■■■□□ 2.33
GPC1-202ENST00000420138 NEURL4Q96JN8 1562 aa29.58■■■□□ 2.33
GPC1-202ENST00000420138 ARHGAP31Q2M1Z3 1444 aa29.57■■■□□ 2.32
GPC1-202ENST00000420138 DDX10Q13206 875 aaKnown RBP29.55■■■□□ 2.32
GPC1-202ENST00000420138 CLTCQ00610 1675 aaKnown RBP29.54■■■□□ 2.32
GPC1-202ENST00000420138 NOS1P29475 1434 aa29.54■■■□□ 2.32
GPC1-202ENST00000420138 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
GPC1-202ENST00000420138 ARID4BQ4LE39 1312 aaPredicted RBP29.53■■■□□ 2.32
GPC1-202ENST00000420138 MLECQ14165 292 aa29.52■■■□□ 2.32
GPC1-202ENST00000420138 TRPM1Q7Z4N2 1603 aa29.52■■■□□ 2.32
GPC1-202ENST00000420138 PPP6R1Q9UPN7 881 aa29.52■■■□□ 2.32
GPC1-202ENST00000420138 USP47Q96K76 1375 aa29.51■■■□□ 2.32
GPC1-202ENST00000420138 WASHC2AQ641Q2 1341 aa29.51■■■□□ 2.31
GPC1-202ENST00000420138 C11orf95C9JLR9 678 aaPredicted RBP29.49■■■□□ 2.31
GPC1-202ENST00000420138 CARD11Q9BXL7 1154 aa29.48■■■□□ 2.31
GPC1-202ENST00000420138 GPRASP1Q5JY77 1395 aa29.48■■■□□ 2.31
GPC1-202ENST00000420138 ROCK2O75116 1388 aaKnown RBP29.46■■■□□ 2.31
GPC1-202ENST00000420138 STAC3Q96MF2 364 aa29.45■■■□□ 2.31
GPC1-202ENST00000420138 NBPF1Q3BBV0 1214 aa29.45■■■□□ 2.3
GPC1-202ENST00000420138 ADGRB3O60242 1522 aa29.44■■■□□ 2.3
GPC1-202ENST00000420138 SYNMO15061 1565 aa29.44■■■□□ 2.3
GPC1-202ENST00000420138 KIF1BO60333 1816 aa29.44■■■□□ 2.3
GPC1-202ENST00000420138 MADDQ8WXG6 1647 aa29.44■■■□□ 2.3
GPC1-202ENST00000420138 PREX1Q8TCU6 1659 aa29.43■■■□□ 2.3
GPC1-202ENST00000420138 MROH2AA6NES4 1674 aa29.41■■■□□ 2.3
GPC1-202ENST00000420138 PIK3C2BO00750 1634 aa29.41■■■□□ 2.3
GPC1-202ENST00000420138 ESF1Q9H501 851 aaKnown RBP29.41■■■□□ 2.3
GPC1-202ENST00000420138 CCDC7Q96M83 1385 aa29.4■■■□□ 2.3
GPC1-202ENST00000420138 LAMC1P11047 1609 aa29.38■■■□□ 2.29
GPC1-202ENST00000420138 MYOM2P54296 1465 aa29.37■■■□□ 2.29
GPC1-202ENST00000420138 KIF7Q2M1P5 1343 aa29.35■■■□□ 2.29
GPC1-202ENST00000420138 FER1L4A9Z1Z3 1794 aa29.35■■■□□ 2.29
GPC1-202ENST00000420138 IFT172Q9UG01 1749 aa29.34■■■□□ 2.29
GPC1-202ENST00000420138 ST20-MTHFSA0A0A6YYL1 179 aa29.33■■■□□ 2.29
GPC1-202ENST00000420138 NRXN1Q9ULB1 1477 aa29.33■■■□□ 2.29
GPC1-202ENST00000420138 IDI1Q13907 227 aa29.31■■■□□ 2.28
GPC1-202ENST00000420138 FBXO31Q5XUX0 539 aaPredicted RBP29.31■■■□□ 2.28
GPC1-202ENST00000420138 ADGRF5Q8IZF2 1346 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms