RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 CERKQ8TCT0 537 aa32.21■■■□□ 2.75
MCF2L-212ENST00000420013 RNF17Q9BXT8 1623 aaKnown RBP32.21■■■□□ 2.75
MCF2L-212ENST00000420013 ZC3H13Q5T200 1668 aaKnown RBP32.18■■■□□ 2.74
MCF2L-212ENST00000420013 TSPY4P0CV99 314 aa32.17■■■□□ 2.74
MCF2L-212ENST00000420013 TSPY10P0CW01 314 aa32.17■■■□□ 2.74
MCF2L-212ENST00000420013 PZPP20742 1482 aa32.16■■■□□ 2.74
MCF2L-212ENST00000420013 CROCC2H7BZ55 1655 aa32.16■■■□□ 2.74
MCF2L-212ENST00000420013 KIF3BO15066 747 aa32.14■■■□□ 2.74
MCF2L-212ENST00000420013 KANK4Q5T7N3 995 aaPredicted RBP32.14■■■□□ 2.74
MCF2L-212ENST00000420013 A2ML1A8K2U0 1454 aa32.13■■■□□ 2.73
MCF2L-212ENST00000420013 TCOF1Q13428 1488 aaKnown RBP32.1■■■□□ 2.73
MCF2L-212ENST00000420013 SHANK2Q9UPX8 1470 aa32.1■■■□□ 2.73
MCF2L-212ENST00000420013 DNMT1P26358 1616 aaKnown RBP32.09■■■□□ 2.73
MCF2L-212ENST00000420013 PTPN23Q9H3S7 1636 aa32.09■■■□□ 2.73
MCF2L-212ENST00000420013 LTBP4Q8N2S1 1624 aa32.08■■■□□ 2.73
MCF2L-212ENST00000420013 IQSEC2Q5JU85 1478 aa32.08■■■□□ 2.73
MCF2L-212ENST00000420013 POLR1AO95602 1720 aaPredicted RBP32.06■■■□□ 2.72
MCF2L-212ENST00000420013 DUOX2Q9NRD8 1548 aa32.05■■■□□ 2.72
MCF2L-212ENST00000420013 APLP2Q06481 763 aa32.05■■■□□ 2.72
MCF2L-212ENST00000420013 TNRQ92752 1358 aa32.05■■■□□ 2.72
MCF2L-212ENST00000420013 MROH1Q8NDA8 1641 aa32.04■■■□□ 2.72
MCF2L-212ENST00000420013 PKD2Q13563 968 aa32.03■■■□□ 2.72
MCF2L-212ENST00000420013 ABCC3O15438 1527 aa32.03■■■□□ 2.72
MCF2L-212ENST00000420013 WASHC2CQ9Y4E1 1318 aa32.02■■■□□ 2.72
MCF2L-212ENST00000420013 NLRP1Q9C000 1473 aa32■■■□□ 2.71
MCF2L-212ENST00000420013 FGD6Q6ZV73 1430 aa31.98■■■□□ 2.71
MCF2L-212ENST00000420013 CEP152O94986 1710 aa31.97■■■□□ 2.71
MCF2L-212ENST00000420013 PRDM15P57071 1507 aaPredicted RBP31.96■■■□□ 2.71
MCF2L-212ENST00000420013 SPATA31D1Q6ZQQ2 1576 aa31.96■■■□□ 2.71
MCF2L-212ENST00000420013 ERBINQ96RT1 1412 aa31.95■■■□□ 2.71
MCF2L-212ENST00000420013 ABCC5O15440 1437 aa31.93■■■□□ 2.7
MCF2L-212ENST00000420013 NCKAP5LQ9HCH0 1330 aa31.93■■■□□ 2.7
MCF2L-212ENST00000420013 DAPK1P53355 1430 aa31.92■■■□□ 2.7
MCF2L-212ENST00000420013 DEPDC5O75140 1603 aa31.92■■■□□ 2.7
MCF2L-212ENST00000420013 KIF15Q9NS87 1388 aa31.92■■■□□ 2.7
MCF2L-212ENST00000420013 NEURL4Q96JN8 1562 aa31.91■■■□□ 2.7
MCF2L-212ENST00000420013 UGGT1Q9NYU2 1555 aa31.9■■■□□ 2.7
MCF2L-212ENST00000420013 FBXO31Q5XUX0 539 aaPredicted RBP31.89■■■□□ 2.7
MCF2L-212ENST00000420013 ERVK-7P63135 1459 aa31.88■■■□□ 2.69
MCF2L-212ENST00000420013 ARHGAP31Q2M1Z3 1444 aa31.81■■■□□ 2.68
MCF2L-212ENST00000420013 ZNF335Q9H4Z2 1342 aaPredicted RBP31.8■■■□□ 2.68
MCF2L-212ENST00000420013 THEMISQ8N1K5 641 aaPredicted RBP31.78■■■□□ 2.68
MCF2L-212ENST00000420013 ANKRD30AQ9BXX3 1397 aa31.78■■■□□ 2.68
MCF2L-212ENST00000420013 MED14O60244 1454 aa31.78■■■□□ 2.68
MCF2L-212ENST00000420013 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
MCF2L-212ENST00000420013 UBR1Q8IWV7 1749 aa31.77■■■□□ 2.68
MCF2L-212ENST00000420013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.76■■■□□ 2.671e-7■■□□□ 13.6
MCF2L-212ENST00000420013 CPS1P31327 1500 aa31.75■■■□□ 2.67
MCF2L-212ENST00000420013 IQGAP1P46940 1657 aa31.75■■■□□ 2.67
MCF2L-212ENST00000420013 CFAP65Q6ZU64 1925 aaKnown RBP31.74■■■□□ 2.67
MCF2L-212ENST00000420013 LMTK2Q8IWU2 1503 aa31.74■■■□□ 2.67
MCF2L-212ENST00000420013 VWDEQ8N2E2 1590 aa31.73■■■□□ 2.67
MCF2L-212ENST00000420013 KANK1Q14678 1352 aa31.71■■■□□ 2.67
MCF2L-212ENST00000420013 ANKLE2Q86XL3 938 aa31.71■■■□□ 2.67
MCF2L-212ENST00000420013 RRP7BPQ9NSQ0 103 aa31.71■■■□□ 2.67
MCF2L-212ENST00000420013 NPHP4O75161 1426 aaPredicted RBP31.69■■■□□ 2.66
MCF2L-212ENST00000420013 KDM5AP29375 1690 aaKnown RBP31.68■■■□□ 2.66
MCF2L-212ENST00000420013 EFCAB6Q5THR3 1501 aa31.65■■■□□ 2.66
MCF2L-212ENST00000420013 SLIT1O75093 1534 aa31.63■■■□□ 2.65
MCF2L-212ENST00000420013 PIK3C2BO00750 1634 aa31.61■■■□□ 2.65
MCF2L-212ENST00000420013 SYNMO15061 1565 aa31.61■■■□□ 2.65
MCF2L-212ENST00000420013 ARHGAP23Q9P227 1491 aa31.61■■■□□ 2.65
MCF2L-212ENST00000420013 SCAF11Q99590 1463 aaKnown RBP31.59■■■□□ 2.65
MCF2L-212ENST00000420013 CHIC2Q9UKJ5 165 aa31.58■■■□□ 2.65
MCF2L-212ENST00000420013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.55■■■□□ 2.646e-8■□□□□ 11
MCF2L-212ENST00000420013 ANKRD50Q9ULJ7 1429 aa31.55■■■□□ 2.64
MCF2L-212ENST00000420013 UBAP1LF5GYI3 381 aa31.54■■■□□ 2.64
MCF2L-212ENST00000420013 FAM50AQ14320 339 aaKnown RBP31.54■■■□□ 2.64
MCF2L-212ENST00000420013 RPRD2Q5VT52 1461 aaKnown RBP31.52■■■□□ 2.64
MCF2L-212ENST00000420013 UNC13BO14795 1591 aa31.52■■■□□ 2.64
MCF2L-212ENST00000420013 TET3O43151 1660 aa31.52■■■□□ 2.64
MCF2L-212ENST00000420013 GCC2Q8IWJ2 1684 aa31.51■■■□□ 2.63
MCF2L-212ENST00000420013 STRCP1A6NGW2 1772 aa31.51■■■□□ 2.63
MCF2L-212ENST00000420013 NOS1P29475 1434 aa31.5■■■□□ 2.63
MCF2L-212ENST00000420013 ADGRB3O60242 1522 aa31.49■■■□□ 2.63
MCF2L-212ENST00000420013 ROCK1Q13464 1354 aa31.44■■■□□ 2.62
MCF2L-212ENST00000420013 TMEM2Q9UHN6 1383 aa31.43■■■□□ 2.62
MCF2L-212ENST00000420013 DISP3Q9P2K9 1392 aa31.41■■■□□ 2.62
MCF2L-212ENST00000420013 LRRC7Q96NW7 1537 aa31.4■■■□□ 2.62
MCF2L-212ENST00000420013 TOM1O60784 492 aa31.4■■■□□ 2.62
MCF2L-212ENST00000420013 EID1Q9Y6B2 187 aa31.4■■■□□ 2.62
MCF2L-212ENST00000420013 IQGAP3Q86VI3 1631 aa31.39■■■□□ 2.62
MCF2L-212ENST00000420013 TXNDC2Q86VQ3 553 aa31.37■■■□□ 2.61
MCF2L-212ENST00000420013 STAG3Q9UJ98 1225 aa31.37■■■□□ 2.61
MCF2L-212ENST00000420013 ALKQ9UM73 1620 aa31.36■■■□□ 2.61
MCF2L-212ENST00000420013 LTKP29376 864 aa31.36■■■□□ 2.61
MCF2L-212ENST00000420013 SLC52A1Q9NWF4 448 aa31.34■■■□□ 2.61
MCF2L-212ENST00000420013 IDI1Q13907 227 aa31.33■■■□□ 2.61
MCF2L-212ENST00000420013 E9PCH4 1651 aa31.32■■■□□ 2.6
MCF2L-212ENST00000420013 MYO5BQ9ULV0 1848 aa31.31■■■□□ 2.6
MCF2L-212ENST00000420013 XIRP1Q702N8 1843 aaKnown RBP31.31■■■□□ 2.6
MCF2L-212ENST00000420013 TMEM131LA2VDJ0 1609 aa31.27■■■□□ 2.6
MCF2L-212ENST00000420013 SCAF1Q9H7N4 1312 aaKnown RBP31.26■■■□□ 2.6
MCF2L-212ENST00000420013 NWD1Q149M9 1564 aa31.26■■■□□ 2.6
MCF2L-212ENST00000420013 PIP4K2BP78356 416 aa31.24■■■□□ 2.59
MCF2L-212ENST00000420013 ZFYVE9O95405 1425 aa31.23■■■□□ 2.59
MCF2L-212ENST00000420013 NKTRP30414 1462 aaKnown RBP31.21■■■□□ 2.59
MCF2L-212ENST00000420013 RRBP1Q9P2E9 1410 aaKnown RBP31.17■■■□□ 2.58
MCF2L-212ENST00000420013 HSPA1LP34931 641 aa31.17■■■□□ 2.58
MCF2L-212ENST00000420013 MED1Q15648 1581 aaPredicted RBP31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms