RNA–Protein interactions for RNA: ENST00000419958.5

RPA2-204, Transcript of replication protein A2, humanhuman

TSL 3

Gene RPA2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-204ENST00000419958 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
RPA2-204ENST00000419958 EVI5O60447 810 aa8.91□□□□□ -0.98
RPA2-204ENST00000419958 BCAMP50895 628 aa8.91□□□□□ -0.98
RPA2-204ENST00000419958 NACADO15069 1562 aa8.9□□□□□ -0.98
RPA2-204ENST00000419958 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
RPA2-204ENST00000419958 CENPBP07199 599 aaPredicted RBP8.9□□□□□ -0.98
RPA2-204ENST00000419958 PPARGC1BQ86YN6 1023 aaKnown RBP8.9□□□□□ -0.98
RPA2-204ENST00000419958 LOC105371045A0A1W2PR82 267 aa8.89□□□□□ -0.99
RPA2-204ENST00000419958 SOWAHBA6NEL2 793 aa8.89□□□□□ -0.99
RPA2-204ENST00000419958 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
RPA2-204ENST00000419958 CRISPLD2Q9H0B8 497 aa8.89□□□□□ -0.99
RPA2-204ENST00000419958 PROX2Q3B8N5 592 aa8.88□□□□□ -0.99
RPA2-204ENST00000419958 LAPTM4BQ86VI4 370 aa8.88□□□□□ -0.99
RPA2-204ENST00000419958 GFRA3O60609 400 aa8.87□□□□□ -0.99
RPA2-204ENST00000419958 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
RPA2-204ENST00000419958 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
RPA2-204ENST00000419958 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
RPA2-204ENST00000419958 LCE2BO14633 110 aa8.84□□□□□ -0.99
RPA2-204ENST00000419958 WRNQ14191 1432 aaPredicted RBP eCLIP8.84□□□□□ -0.99
RPA2-204ENST00000419958 EEA1Q15075 1411 aa8.84□□□□□ -0.99
RPA2-204ENST00000419958 COL9A1P20849 921 aa8.83□□□□□ -1
RPA2-204ENST00000419958 PDE4AP27815 886 aa8.83□□□□□ -1
RPA2-204ENST00000419958 MAP3K9P80192 1104 aa8.83□□□□□ -1
RPA2-204ENST00000419958 CLSPNQ9HAW4 1339 aa8.82□□□□□ -1
RPA2-204ENST00000419958 RYDENQ9NUL5 291 aaKnown RBP8.81□□□□□ -1
RPA2-204ENST00000419958 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
RPA2-204ENST00000419958 PCDHGA10Q9Y5H3 936 aa8.81□□□□□ -1
RPA2-204ENST00000419958 FBXW7Q969H0 707 aa8.79□□□□□ -1
RPA2-204ENST00000419958 NCKAP5LQ9HCH0 1330 aa8.79□□□□□ -1
RPA2-204ENST00000419958 ACIN1Q9UKV3 1341 aaKnown RBP8.79□□□□□ -1
RPA2-204ENST00000419958 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
RPA2-204ENST00000419958 ONECUT3O60422 494 aaPredicted RBP8.78□□□□□ -1
RPA2-204ENST00000419958 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
RPA2-204ENST00000419958 SCRIBQ14160 1630 aa8.77□□□□□ -1.01
RPA2-204ENST00000419958 CHGAP10645 457 aaKnown RBP8.77□□□□□ -1.01
RPA2-204ENST00000419958 TYW1BQ6NUM6 668 aa8.77□□□□□ -1.01
RPA2-204ENST00000419958 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.77□□□□□ -1.01
RPA2-204ENST00000419958 SEPT9Q9UHD8 586 aaPredicted RBP8.77□□□□□ -1.01
RPA2-204ENST00000419958 HPS5Q9UPZ3 1129 aa8.77□□□□□ -1.01
RPA2-204ENST00000419958 BAZ1AQ9NRL2 1556 aaPredicted RBP8.77□□□□□ -1.01
RPA2-204ENST00000419958 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
RPA2-204ENST00000419958 LRCH3Q96II8 777 aa8.76□□□□□ -1.01
RPA2-204ENST00000419958 PHF14O94880 888 aa8.75□□□□□ -1.01
RPA2-204ENST00000419958 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
RPA2-204ENST00000419958 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
RPA2-204ENST00000419958 ZNF787Q6DD87 383 aa8.74□□□□□ -1.01
RPA2-204ENST00000419958 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
RPA2-204ENST00000419958 NKX1-1Q15270 411 aaPredicted RBP8.72□□□□□ -1.01
RPA2-204ENST00000419958 TRIM6-TRIM34B2RNG4 842 aa8.71□□□□□ -1.02
RPA2-204ENST00000419958 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
RPA2-204ENST00000419958 TNIKQ9UKE5 1360 aa8.71□□□□□ -1.02
RPA2-204ENST00000419958 C6orf132Q5T0Z8 1188 aa8.7□□□□□ -1.02
RPA2-204ENST00000419958 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
RPA2-204ENST00000419958 EMILIN3Q9NT22 766 aa8.7□□□□□ -1.02
RPA2-204ENST00000419958 V9GY48 417 aaPredicted RBP8.7□□□□□ -1.02
RPA2-204ENST00000419958 PPP4CP60510 307 aa8.69□□□□□ -1.02
RPA2-204ENST00000419958 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
RPA2-204ENST00000419958 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
RPA2-204ENST00000419958 EPAS1Q99814 870 aa8.68□□□□□ -1.02
RPA2-204ENST00000419958 TTBK1Q5TCY1 1321 aaPredicted RBP8.68□□□□□ -1.02
RPA2-204ENST00000419958 TOP2AP11388 1531 aaKnown RBP8.67□□□□□ -1.02
RPA2-204ENST00000419958 MFSD10Q14728 455 aa8.67□□□□□ -1.02
RPA2-204ENST00000419958 ZNF775Q96BV0 537 aaPredicted RBP8.67□□□□□ -1.02
RPA2-204ENST00000419958 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
RPA2-204ENST00000419958 PPP1R18Q6NYC8 613 aa8.66□□□□□ -1.02
RPA2-204ENST00000419958 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
RPA2-204ENST00000419958 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
RPA2-204ENST00000419958 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
RPA2-204ENST00000419958 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
RPA2-204ENST00000419958 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.63□□□□□ -1.03
RPA2-204ENST00000419958 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
RPA2-204ENST00000419958 MTRQ99707 1265 aa8.62□□□□□ -1.03
RPA2-204ENST00000419958 CEP162Q5TB80 1403 aa8.61□□□□□ -1.03
RPA2-204ENST00000419958 GOLGA3Q08378 1498 aa8.6□□□□□ -1.03
RPA2-204ENST00000419958 SAMD7Q7Z3H4 446 aa8.59□□□□□ -1.03
RPA2-204ENST00000419958 WIZO95785 1651 aa8.59□□□□□ -1.03
RPA2-204ENST00000419958 BAZ1BQ9UIG0 1483 aaKnown RBP8.58□□□□□ -1.04
RPA2-204ENST00000419958 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
RPA2-204ENST00000419958 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
RPA2-204ENST00000419958 NEUROD1Q13562 356 aa8.57□□□□□ -1.04
RPA2-204ENST00000419958 GTF3C3Q9Y5Q9 886 aa8.57□□□□□ -1.04
RPA2-204ENST00000419958 KIF21BO75037 1637 aa8.57□□□□□ -1.04
RPA2-204ENST00000419958 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
RPA2-204ENST00000419958 SMARCA4P51532 1647 aa8.56□□□□□ -1.04
RPA2-204ENST00000419958 GGCXP38435 758 aa8.56□□□□□ -1.04
RPA2-204ENST00000419958 FAM9AQ8IZU1 332 aaPredicted RBP8.56□□□□□ -1.04
RPA2-204ENST00000419958 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
RPA2-204ENST00000419958 GTPBP6O43824 516 aaPredicted RBP8.55□□□□□ -1.04
RPA2-204ENST00000419958 DPYSL4O14531 572 aa8.54□□□□□ -1.04
RPA2-204ENST00000419958 DDX12PQ92771 950 aa8.54□□□□□ -1.04
RPA2-204ENST00000419958 SMARCA2P51531 1590 aa8.53□□□□□ -1.04
RPA2-204ENST00000419958 PEG3Q9GZU2 1588 aa8.53□□□□□ -1.04
RPA2-204ENST00000419958 SMAPO00193 183 aa8.53□□□□□ -1.04
RPA2-204ENST00000419958 MAP3K7O43318 606 aa8.52□□□□□ -1.05
RPA2-204ENST00000419958 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
RPA2-204ENST00000419958 RNF40O75150 1001 aa8.51□□□□□ -1.05
RPA2-204ENST00000419958 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
RPA2-204ENST00000419958 TSR1Q2NL82 804 aaKnown RBP8.51□□□□□ -1.05
RPA2-204ENST00000419958 NKX2-3Q8TAU0 364 aa8.51□□□□□ -1.05
RPA2-204ENST00000419958 CCDC88BA6NC98 1476 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms