RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
PDLIM4-203ENST00000418373 POLR1AO95602 1720 aaPredicted RBP20.39■□□□□ 0.86
PDLIM4-203ENST00000418373 PZPP20742 1482 aa20.39■□□□□ 0.85
PDLIM4-203ENST00000418373 PKD2Q13563 968 aa20.39■□□□□ 0.85
PDLIM4-203ENST00000418373 MAST1Q9Y2H9 1570 aa20.38■□□□□ 0.85
PDLIM4-203ENST00000418373 KIF3BO15066 747 aa20.37■□□□□ 0.85
PDLIM4-203ENST00000418373 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
PDLIM4-203ENST00000418373 RNF17Q9BXT8 1623 aaKnown RBP20.36■□□□□ 0.85
PDLIM4-203ENST00000418373 MAP3K1Q13233 1512 aa20.36■□□□□ 0.85
PDLIM4-203ENST00000418373 NEURL4Q96JN8 1562 aa20.35■□□□□ 0.85
PDLIM4-203ENST00000418373 TNRQ92752 1358 aa20.34■□□□□ 0.85
PDLIM4-203ENST00000418373 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
PDLIM4-203ENST00000418373 FBXO31Q5XUX0 539 aaPredicted RBP20.32■□□□□ 0.84
PDLIM4-203ENST00000418373 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
PDLIM4-203ENST00000418373 LOC105371045A0A1W2PR82 267 aa20.3■□□□□ 0.84
PDLIM4-203ENST00000418373 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
PDLIM4-203ENST00000418373 WASHC2CQ9Y4E1 1318 aa20.29■□□□□ 0.84
PDLIM4-203ENST00000418373 NLRP1Q9C000 1473 aa20.29■□□□□ 0.84
PDLIM4-203ENST00000418373 MIA2Q96PC5 1412 aa20.28■□□□□ 0.84
PDLIM4-203ENST00000418373 ABCC3O15438 1527 aa20.28■□□□□ 0.84
PDLIM4-203ENST00000418373 TSPY4P0CV99 314 aa20.28■□□□□ 0.84
PDLIM4-203ENST00000418373 TSPY10P0CW01 314 aa20.28■□□□□ 0.84
PDLIM4-203ENST00000418373 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
PDLIM4-203ENST00000418373 SPATA31D1Q6ZQQ2 1576 aa20.28■□□□□ 0.84
PDLIM4-203ENST00000418373 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
PDLIM4-203ENST00000418373 DISP3Q9P2K9 1392 aa20.26■□□□□ 0.83
PDLIM4-203ENST00000418373 DEPDC5O75140 1603 aa20.26■□□□□ 0.83
PDLIM4-203ENST00000418373 CROCC2H7BZ55 1655 aa20.25■□□□□ 0.83
PDLIM4-203ENST00000418373 UGGT1Q9NYU2 1555 aa20.25■□□□□ 0.83
PDLIM4-203ENST00000418373 CEP152O94986 1710 aa20.24■□□□□ 0.83
PDLIM4-203ENST00000418373 MED14O60244 1454 aa20.23■□□□□ 0.83
PDLIM4-203ENST00000418373 CPS1P31327 1500 aa20.22■□□□□ 0.83
PDLIM4-203ENST00000418373 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
PDLIM4-203ENST00000418373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.21■□□□□ 0.83
PDLIM4-203ENST00000418373 ILDR2Q71H61 639 aa20.21■□□□□ 0.83
PDLIM4-203ENST00000418373 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
PDLIM4-203ENST00000418373 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
PDLIM4-203ENST00000418373 ERVK-7P63135 1459 aa20.2■□□□□ 0.82
PDLIM4-203ENST00000418373 UBAP1LF5GYI3 381 aa20.2■□□□□ 0.82
PDLIM4-203ENST00000418373 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
PDLIM4-203ENST00000418373 CFAP65Q6ZU64 1925 aaKnown RBP20.19■□□□□ 0.82
PDLIM4-203ENST00000418373 PRDM15P57071 1507 aaPredicted RBP20.18■□□□□ 0.82
PDLIM4-203ENST00000418373 THEMISQ8N1K5 641 aaPredicted RBP20.18■□□□□ 0.82
PDLIM4-203ENST00000418373 PTPN23Q9H3S7 1636 aa20.17■□□□□ 0.82
PDLIM4-203ENST00000418373 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
PDLIM4-203ENST00000418373 ANKLE2Q86XL3 938 aa20.17■□□□□ 0.82
PDLIM4-203ENST00000418373 NPHP4O75161 1426 aaPredicted RBP20.17■□□□□ 0.82
PDLIM4-203ENST00000418373 ABCC5O15440 1437 aa20.15■□□□□ 0.82
PDLIM4-203ENST00000418373 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
PDLIM4-203ENST00000418373 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
PDLIM4-203ENST00000418373 ALKQ9UM73 1620 aa20.13■□□□□ 0.81
PDLIM4-203ENST00000418373 KIF15Q9NS87 1388 aa20.12■□□□□ 0.81
PDLIM4-203ENST00000418373 ARHGAP31Q2M1Z3 1444 aa20.11■□□□□ 0.81
PDLIM4-203ENST00000418373 DAPK1P53355 1430 aa20.1■□□□□ 0.81
PDLIM4-203ENST00000418373 SOCS7O14512 581 aa20.09■□□□□ 0.81
PDLIM4-203ENST00000418373 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
PDLIM4-203ENST00000418373 SYNMO15061 1565 aa20.08■□□□□ 0.8
PDLIM4-203ENST00000418373 SLIT1O75093 1534 aa20.07■□□□□ 0.8
PDLIM4-203ENST00000418373 ARHGAP23Q9P227 1491 aa20.07■□□□□ 0.8
PDLIM4-203ENST00000418373 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
PDLIM4-203ENST00000418373 TOM1O60784 492 aa20.05■□□□□ 0.8
PDLIM4-203ENST00000418373 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
PDLIM4-203ENST00000418373 KDM5AP29375 1690 aaKnown RBP20.04■□□□□ 0.8
PDLIM4-203ENST00000418373 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
PDLIM4-203ENST00000418373 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
PDLIM4-203ENST00000418373 LMTK2Q8IWU2 1503 aa20.03■□□□□ 0.8
PDLIM4-203ENST00000418373 HSPA1LP34931 641 aa20.03■□□□□ 0.8
PDLIM4-203ENST00000418373 PIP4K2BP78356 416 aa20.01■□□□□ 0.79
PDLIM4-203ENST00000418373 XIRP1Q702N8 1843 aaKnown RBP20.01■□□□□ 0.79
PDLIM4-203ENST00000418373 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
PDLIM4-203ENST00000418373 APLP2Q06481 763 aa20■□□□□ 0.79
PDLIM4-203ENST00000418373 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
PDLIM4-203ENST00000418373 LTKP29376 864 aa19.99■□□□□ 0.79
PDLIM4-203ENST00000418373 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
PDLIM4-203ENST00000418373 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
PDLIM4-203ENST00000418373 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
PDLIM4-203ENST00000418373 KANK1Q14678 1352 aa19.96■□□□□ 0.79
PDLIM4-203ENST00000418373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDLIM4-203ENST00000418373 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
PDLIM4-203ENST00000418373 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
PDLIM4-203ENST00000418373 NOS1P29475 1434 aa19.93■□□□□ 0.78
PDLIM4-203ENST00000418373 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
PDLIM4-203ENST00000418373 ADGRB3O60242 1522 aa19.91■□□□□ 0.78
PDLIM4-203ENST00000418373 TET3O43151 1660 aa19.91■□□□□ 0.78
PDLIM4-203ENST00000418373 IDI1Q13907 227 aa19.89■□□□□ 0.77
PDLIM4-203ENST00000418373 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
PDLIM4-203ENST00000418373 RPRD2Q5VT52 1461 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-203ENST00000418373 MYO5BQ9ULV0 1848 aa19.87■□□□□ 0.77
PDLIM4-203ENST00000418373 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
PDLIM4-203ENST00000418373 GCC2Q8IWJ2 1684 aa19.85■□□□□ 0.77
PDLIM4-203ENST00000418373 UNC13BO14795 1591 aa19.85■□□□□ 0.77
PDLIM4-203ENST00000418373 NWD1Q149M9 1564 aa19.84■□□□□ 0.77
PDLIM4-203ENST00000418373 STAG3Q9UJ98 1225 aa19.84■□□□□ 0.77
PDLIM4-203ENST00000418373 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
PDLIM4-203ENST00000418373 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
PDLIM4-203ENST00000418373 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
PDLIM4-203ENST00000418373 ZFYVE9O95405 1425 aa19.8■□□□□ 0.76
PDLIM4-203ENST00000418373 TMEM94Q12767 1356 aa19.8■□□□□ 0.76
PDLIM4-203ENST00000418373 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
PDLIM4-203ENST00000418373 E9PCH4 1651 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms