RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 ACIN1Q9UKV3 1341 aaKnown RBP6.79□□□□□ -1.32
RFC4-205ENST00000418288 GRXCR2A6NFK2 248 aa6.79□□□□□ -1.32
RFC4-205ENST00000418288 AKT1S1Q96B36 256 aa6.79□□□□□ -1.32
RFC4-205ENST00000418288 DSG2Q14126 1118 aa6.78□□□□□ -1.32
RFC4-205ENST00000418288 FBXO31Q5XUX0 539 aaPredicted RBP6.78□□□□□ -1.32
RFC4-205ENST00000418288 SND1Q7KZF4 910 aaKnown RBP eCLIP6.78□□□□□ -1.32
RFC4-205ENST00000418288 PBXIP1Q96AQ6 731 aa6.78□□□□□ -1.32
RFC4-205ENST00000418288 POM121CA8CG34 1229 aa6.77□□□□□ -1.33
RFC4-205ENST00000418288 GLMNQ92990 594 aa6.77□□□□□ -1.33
RFC4-205ENST00000418288 CALR3Q96L12 384 aaKnown RBP6.77□□□□□ -1.33
RFC4-205ENST00000418288 CHMP4AQ9BY43 222 aa6.77□□□□□ -1.33
RFC4-205ENST00000418288 IVNS1ABPQ9Y6Y0 642 aa6.77□□□□□ -1.33
RFC4-205ENST00000418288 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
RFC4-205ENST00000418288 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
RFC4-205ENST00000418288 PTGDRQ13258 359 aa6.76□□□□□ -1.33
RFC4-205ENST00000418288 FAM177A1Q8N128 213 aaPredicted RBP6.76□□□□□ -1.33
RFC4-205ENST00000418288 TBC1D12O60347 775 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 CLCN1P35523 988 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 RFC5P40937 340 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 GDPD2Q9HCC8 539 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 GPCPD1Q9NPB8 672 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 POLR3EQ9NVU0 708 aa6.75□□□□□ -1.33
RFC4-205ENST00000418288 CARNS1A5YM72 827 aa6.74□□□□□ -1.33
RFC4-205ENST00000418288 MAP3K13O43283 966 aa6.74□□□□□ -1.33
RFC4-205ENST00000418288 MYSM1Q5VVJ2 828 aa6.74□□□□□ -1.33
RFC4-205ENST00000418288 REM2Q8IYK8 340 aaPredicted RBP6.74□□□□□ -1.33
RFC4-205ENST00000418288 BEGAINQ9BUH8 593 aa6.74□□□□□ -1.33
RFC4-205ENST00000418288 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.73□□□□□ -1.33
RFC4-205ENST00000418288 SSTR3P32745 418 aaPredicted RBP6.73□□□□□ -1.33
RFC4-205ENST00000418288 PHOX2BQ99453 314 aa6.73□□□□□ -1.33
RFC4-205ENST00000418288 RBM47A0AV96 593 aaKnown RBP6.72□□□□□ -1.33
RFC4-205ENST00000418288 PTGER2P43116 358 aa6.72□□□□□ -1.33
RFC4-205ENST00000418288 CLK2P49760 499 aaKnown RBP6.72□□□□□ -1.33
RFC4-205ENST00000418288 FOXK1P85037 733 aa6.72□□□□□ -1.33
RFC4-205ENST00000418288 MDM2Q00987 491 aaPredicted RBP6.72□□□□□ -1.33
RFC4-205ENST00000418288 CFAP70Q5T0N1 1121 aa6.72□□□□□ -1.33
RFC4-205ENST00000418288 KIF12Q96FN5 646 aa6.72□□□□□ -1.33
RFC4-205ENST00000418288 SOCS7O14512 581 aa6.71□□□□□ -1.34
RFC4-205ENST00000418288 CSB-PGBD3P0DP91 1061 aa6.71□□□□□ -1.34
RFC4-205ENST00000418288 PPP2R2DQ66LE6 453 aa6.71□□□□□ -1.34
RFC4-205ENST00000418288 ADAMTS19Q8TE59 1207 aa6.71□□□□□ -1.34
RFC4-205ENST00000418288 FAM217BQ9NTX9 383 aaPredicted RBP6.7□□□□□ -1.34
RFC4-205ENST00000418288 FARP1Q9Y4F1 1045 aaPredicted RBP6.7□□□□□ -1.34
RFC4-205ENST00000418288 TMEM259Q4ZIN3 620 aa6.69□□□□□ -1.34
RFC4-205ENST00000418288 CHADLQ6NUI6 762 aa6.69□□□□□ -1.34
RFC4-205ENST00000418288 CCDC125Q86Z20 511 aa6.69□□□□□ -1.34
RFC4-205ENST00000418288 KIAA1522Q9P206 1035 aaPredicted RBP6.69□□□□□ -1.34
RFC4-205ENST00000418288 TMEM88BA6NKF7 163 aa6.68□□□□□ -1.34
RFC4-205ENST00000418288 PITPNM1O00562 1244 aa6.68□□□□□ -1.34
RFC4-205ENST00000418288 ABL2P42684 1182 aa6.68□□□□□ -1.34
RFC4-205ENST00000418288 ILDR1Q86SU0 546 aaPredicted RBP6.68□□□□□ -1.34
RFC4-205ENST00000418288 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
RFC4-205ENST00000418288 TBC1D2BQ9UPU7 963 aa6.68□□□□□ -1.34
RFC4-205ENST00000418288 TXNDC2Q86VQ3 553 aa6.67□□□□□ -1.34
RFC4-205ENST00000418288 ATP1B4Q9UN42 357 aaPredicted RBP6.67□□□□□ -1.34
RFC4-205ENST00000418288 GNEQ9Y223 722 aaKnown RBP6.67□□□□□ -1.34
RFC4-205ENST00000418288 RFX1P22670 979 aa6.66□□□□□ -1.34
RFC4-205ENST00000418288 PLPP6Q8IY26 295 aa6.66□□□□□ -1.34
RFC4-205ENST00000418288 DDX12PQ92771 950 aa6.66□□□□□ -1.34
RFC4-205ENST00000418288 VRTNQ9H8Y1 702 aa6.66□□□□□ -1.34
RFC4-205ENST00000418288 MAP3K9P80192 1104 aa6.65□□□□□ -1.34
RFC4-205ENST00000418288 RBM42Q9BTD8 480 aaKnown RBP6.65□□□□□ -1.34
RFC4-205ENST00000418288 NPDC1Q9NQX5 325 aaPredicted RBP6.65□□□□□ -1.34
RFC4-205ENST00000418288 LIMD1Q9UGP4 676 aa6.65□□□□□ -1.34
RFC4-205ENST00000418288 MYT1LQ9UL68 1186 aa6.65□□□□□ -1.34
RFC4-205ENST00000418288 TBC1D2Q9BYX2 928 aa6.64□□□□□ -1.35
RFC4-205ENST00000418288 CDHR5Q9HBB8 845 aa6.64□□□□□ -1.35
RFC4-205ENST00000418288 HDGFL1Q5TGJ6 251 aa6.63□□□□□ -1.35
RFC4-205ENST00000418288 MRRFQ96E11 262 aaKnown RBP6.63□□□□□ -1.35
RFC4-205ENST00000418288 PPP1R12CQ9BZL4 782 aa6.63□□□□□ -1.35
RFC4-205ENST00000418288 DNAJC14Q6Y2X3 702 aaPredicted RBP6.62□□□□□ -1.35
RFC4-205ENST00000418288 TMC2Q8TDI7 906 aa6.62□□□□□ -1.35
RFC4-205ENST00000418288 KIF3CO14782 793 aa6.61□□□□□ -1.35
RFC4-205ENST00000418288 GPR37L1O60883 481 aa6.61□□□□□ -1.35
RFC4-205ENST00000418288 ATG7O95352 703 aa6.61□□□□□ -1.35
RFC4-205ENST00000418288 GOLGA2Q08379 1002 aa6.61□□□□□ -1.35
RFC4-205ENST00000418288 TUSC1Q2TAM9 212 aa6.61□□□□□ -1.35
RFC4-205ENST00000418288 NOM1Q5C9Z4 860 aaKnown RBP6.6□□□□□ -1.35
RFC4-205ENST00000418288 CHRDL2Q6WN34 429 aa6.6□□□□□ -1.35
RFC4-205ENST00000418288 MICALL2Q8IY33 904 aa6.6□□□□□ -1.35
RFC4-205ENST00000418288 NLRP7Q8WX94 980 aa6.6□□□□□ -1.35
RFC4-205ENST00000418288 PALM3A6NDB9 673 aaPredicted RBP6.59□□□□□ -1.35
RFC4-205ENST00000418288 METTL3Q86U44 580 aaKnown RBP6.59□□□□□ -1.35
RFC4-205ENST00000418288 GJD4Q96KN9 370 aaPredicted RBP6.59□□□□□ -1.35
RFC4-205ENST00000418288 TMEM106CQ9BVX2 250 aa6.59□□□□□ -1.35
RFC4-205ENST00000418288 PRM3Q9NNZ6 103 aa6.59□□□□□ -1.35
RFC4-205ENST00000418288 C2orf72A6NCS6 295 aa6.58□□□□□ -1.36
RFC4-205ENST00000418288 DIXDC1Q155Q3 683 aa6.58□□□□□ -1.36
RFC4-205ENST00000418288 UPF1Q92900 1129 aaKnown RBP eCLIP6.58□□□□□ -1.36
RFC4-205ENST00000418288 UCN2Q96RP3 112 aa6.58□□□□□ -1.36
RFC4-205ENST00000418288 ZNF16P17020 682 aaPredicted RBP6.57□□□□□ -1.36
RFC4-205ENST00000418288 RIC3Q7Z5B4 369 aa6.57□□□□□ -1.36
RFC4-205ENST00000418288 C8orf37Q96NL8 207 aa6.57□□□□□ -1.36
RFC4-205ENST00000418288 SPTLC1O15269 473 aa6.56□□□□□ -1.36
RFC4-205ENST00000418288 USP17L8P0C7I0 530 aa6.56□□□□□ -1.36
RFC4-205ENST00000418288 TCF3P15923 654 aa6.56□□□□□ -1.36
RFC4-205ENST00000418288 ERCC3P19447 782 aa6.56□□□□□ -1.36
RFC4-205ENST00000418288 CANXP27824 592 aaKnown RBP6.56□□□□□ -1.36
RFC4-205ENST00000418288 EN1Q05925 392 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms