RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ROCK2O75116 1388 aaKnown RBP10.54□□□□□ -0.72
HMGXB4-202ENST00000418170 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
HMGXB4-202ENST00000418170 PLB1Q6P1J6 1458 aa10.53□□□□□ -0.72
HMGXB4-202ENST00000418170 USP47Q96K76 1375 aa10.53□□□□□ -0.72
HMGXB4-202ENST00000418170 KDM5CP41229 1560 aa10.53□□□□□ -0.72
HMGXB4-202ENST00000418170 SKAP1Q86WV1 359 aa10.53□□□□□ -0.72
HMGXB4-202ENST00000418170 KIF15Q9NS87 1388 aa10.52□□□□□ -0.72
HMGXB4-202ENST00000418170 MBD5Q9P267 1494 aa10.52□□□□□ -0.72
HMGXB4-202ENST00000418170 MYBBP1AQ9BQG0 1328 aaKnown RBP10.51□□□□□ -0.73
HMGXB4-202ENST00000418170 CDC42BPBQ9Y5S2 1711 aa10.51□□□□□ -0.73
HMGXB4-202ENST00000418170 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
HMGXB4-202ENST00000418170 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
HMGXB4-202ENST00000418170 KDM2BQ8NHM5 1336 aa10.5□□□□□ -0.73
HMGXB4-202ENST00000418170 FAM161AQ3B820 660 aa10.5□□□□□ -0.73
HMGXB4-202ENST00000418170 CRBNQ96SW2 442 aa10.5□□□□□ -0.73
HMGXB4-202ENST00000418170 C8orf34Q49A92 452 aa10.49□□□□□ -0.73
HMGXB4-202ENST00000418170 RALBP1Q15311 655 aa10.49□□□□□ -0.73
HMGXB4-202ENST00000418170 DNMT1P26358 1616 aaKnown RBP10.48□□□□□ -0.73
HMGXB4-202ENST00000418170 E9PCH4 1651 aa10.48□□□□□ -0.73
HMGXB4-202ENST00000418170 ZMYND15Q9H091 742 aa10.48□□□□□ -0.73
HMGXB4-202ENST00000418170 PLIN1O60240 522 aa10.48□□□□□ -0.73
HMGXB4-202ENST00000418170 ABCC10Q5T3U5 1492 aa10.47□□□□□ -0.73
HMGXB4-202ENST00000418170 CENPQQ7L2Z9 268 aaPredicted RBP10.47□□□□□ -0.73
HMGXB4-202ENST00000418170 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
HMGXB4-202ENST00000418170 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
HMGXB4-202ENST00000418170 VIRMAQ69YN4 1812 aaKnown RBP10.46□□□□□ -0.73
HMGXB4-202ENST00000418170 L1TD1Q5T7N2 865 aaKnown RBP10.46□□□□□ -0.73
HMGXB4-202ENST00000418170 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
HMGXB4-202ENST00000418170 POGKQ9P215 609 aa10.46□□□□□ -0.74
HMGXB4-202ENST00000418170 RRP9O43818 475 aaKnown RBP10.45□□□□□ -0.74
HMGXB4-202ENST00000418170 ZMYM4Q5VZL5 1548 aa10.45□□□□□ -0.74
HMGXB4-202ENST00000418170 SLC4A1APQ9BWU0 796 aaKnown RBP10.44□□□□□ -0.74
HMGXB4-202ENST00000418170 NLRP13Q86W25 1043 aa10.44□□□□□ -0.74
HMGXB4-202ENST00000418170 INSRP06213 1382 aa10.44□□□□□ -0.74
HMGXB4-202ENST00000418170 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
HMGXB4-202ENST00000418170 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
HMGXB4-202ENST00000418170 ATP10BO94823 1461 aa10.44□□□□□ -0.74
HMGXB4-202ENST00000418170 HSP90AA2PQ14568 343 aaPredicted RBP10.43□□□□□ -0.74
HMGXB4-202ENST00000418170 RALGAPBQ86X10 1494 aa10.43□□□□□ -0.74
HMGXB4-202ENST00000418170 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
HMGXB4-202ENST00000418170 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 BLMP54132 1417 aaPredicted RBP10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 PREX2Q70Z35 1606 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 DAPK1P53355 1430 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 TTC37Q6PGP7 1564 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 PZPP20742 1482 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 ZCCHC11Q5TAX3 1644 aaKnown RBP10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 CLCN1P35523 988 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 C20orf194Q5TEA3 1177 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 UHRF1BP1Q6BDS2 1440 aa10.42□□□□□ -0.74
HMGXB4-202ENST00000418170 NAP1L5Q96NT1 182 aaPredicted RBP10.41□□□□□ -0.74
HMGXB4-202ENST00000418170 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
HMGXB4-202ENST00000418170 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
HMGXB4-202ENST00000418170 PRG4Q92954 1404 aaPredicted RBP10.41□□□□□ -0.74
HMGXB4-202ENST00000418170 ZNF326Q5BKZ1 582 aaKnown RBP10.4□□□□□ -0.74
HMGXB4-202ENST00000418170 GPATCH8Q9UKJ3 1502 aaKnown RBP10.4□□□□□ -0.74
HMGXB4-202ENST00000418170 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
HMGXB4-202ENST00000418170 SAMD9LQ8IVG5 1584 aa10.39□□□□□ -0.75
HMGXB4-202ENST00000418170 ABCC5O15440 1437 aa10.38□□□□□ -0.75
HMGXB4-202ENST00000418170 KIAA1107Q9UPP5 1409 aa10.38□□□□□ -0.75
HMGXB4-202ENST00000418170 USP19O94966 1318 aa10.38□□□□□ -0.75
HMGXB4-202ENST00000418170 FSD2A1L4K1 749 aa10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 CARD11Q9BXL7 1154 aa10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 ARHGEF12Q9NZN5 1544 aa10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 RGS3P49796 1198 aa10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 BECN1Q14457 450 aa10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 TROQ12816 1431 aaPredicted RBP10.37□□□□□ -0.75
HMGXB4-202ENST00000418170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.36□□□□□ -0.75
HMGXB4-202ENST00000418170 ST20-MTHFSA0A0A6YYL1 179 aa10.36□□□□□ -0.75
HMGXB4-202ENST00000418170 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
HMGXB4-202ENST00000418170 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
HMGXB4-202ENST00000418170 CAMSAP2Q08AD1 1489 aa10.35□□□□□ -0.75
HMGXB4-202ENST00000418170 MYO5CQ9NQX4 1742 aa10.34□□□□□ -0.75
HMGXB4-202ENST00000418170 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
HMGXB4-202ENST00000418170 NLRP1Q9C000 1473 aa10.34□□□□□ -0.75
HMGXB4-202ENST00000418170 PER1O15534 1290 aaPredicted RBP10.33□□□□□ -0.76
HMGXB4-202ENST00000418170 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.33□□□□□ -0.76
HMGXB4-202ENST00000418170 ADGRL2O95490 1459 aa10.33□□□□□ -0.76
HMGXB4-202ENST00000418170 UHRF1BP1LA0JNW5 1464 aa10.33□□□□□ -0.76
HMGXB4-202ENST00000418170 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
HMGXB4-202ENST00000418170 PANK2Q9BZ23 570 aa10.33□□□□□ -0.76
HMGXB4-202ENST00000418170 ARHGEF5Q12774 1597 aa10.32□□□□□ -0.76
HMGXB4-202ENST00000418170 DUSP27Q5VZP5 1158 aa10.32□□□□□ -0.76
HMGXB4-202ENST00000418170 EIF3AQ14152 1382 aaKnown RBP10.32□□□□□ -0.76
HMGXB4-202ENST00000418170 PKD2Q13563 968 aa10.31□□□□□ -0.76
HMGXB4-202ENST00000418170 ZNF644Q9H582 1327 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-202ENST00000418170 SEC24BO95487 1268 aa10.3□□□□□ -0.76
HMGXB4-202ENST00000418170 ARXQ96QS3 562 aa10.3□□□□□ -0.76
HMGXB4-202ENST00000418170 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 MRE11P49959 708 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 CENPJQ9HC77 1338 aaPredicted RBP10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 MAPK8IP3Q9UPT6 1336 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 ZNF521Q96K83 1311 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 CARMIL2Q6F5E8 1435 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 ABCA9Q8IUA7 1624 aa10.29□□□□□ -0.76
HMGXB4-202ENST00000418170 ESPNB1AK53 854 aa10.28□□□□□ -0.76
HMGXB4-202ENST00000418170 MCM4P33991 863 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms