RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ZMYM4Q5VZL5 1548 aa30.23■■■□□ 2.43
CASC3-203ENST00000418132 ANKRD30BQ9BXX2 1392 aa30.22■■■□□ 2.43
CASC3-203ENST00000418132 A2MP01023 1474 aa30.22■■■□□ 2.43
CASC3-203ENST00000418132 DEPDC5O75140 1603 aa30.22■■■□□ 2.43
CASC3-203ENST00000418132 NEUROD1Q13562 356 aa30.22■■■□□ 2.43
CASC3-203ENST00000418132 FOXD1Q16676 465 aa30.22■■■□□ 2.43
CASC3-203ENST00000418132 TIMELESSQ9UNS1 1208 aa30.22■■■□□ 2.43
CASC3-203ENST00000418132 PKD2Q13563 968 aa30.2■■■□□ 2.43
CASC3-203ENST00000418132 DIP2CQ9Y2E4 1556 aa30.18■■■□□ 2.42
CASC3-203ENST00000418132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.15■■■□□ 2.421e-7■■□□□ 13.4
CASC3-203ENST00000418132 BCORL1Q5H9F3 1711 aa30.12■■■□□ 2.41
CASC3-203ENST00000418132 KIF3BO15066 747 aa30.12■■■□□ 2.41
CASC3-203ENST00000418132 PRDM15P57071 1507 aaPredicted RBP30.11■■■□□ 2.41
CASC3-203ENST00000418132 COL17A1Q9UMD9 1497 aaPredicted RBP30.11■■■□□ 2.41
CASC3-203ENST00000418132 YEATS2Q9ULM3 1422 aa30.11■■■□□ 2.41
CASC3-203ENST00000418132 MROH1Q8NDA8 1641 aa30.11■■■□□ 2.41
CASC3-203ENST00000418132 VWDEQ8N2E2 1590 aa30.11■■■□□ 2.41
CASC3-203ENST00000418132 RNF17Q9BXT8 1623 aaKnown RBP30.1■■■□□ 2.41
CASC3-203ENST00000418132 RPRD2Q5VT52 1461 aaKnown RBP30.09■■■□□ 2.41
CASC3-203ENST00000418132 TONSLQ96HA7 1378 aa30.08■■■□□ 2.41
CASC3-203ENST00000418132 KANK1Q14678 1352 aa30.05■■■□□ 2.4
CASC3-203ENST00000418132 TET3O43151 1660 aa30.01■■■□□ 2.39
CASC3-203ENST00000418132 TRHP20396 242 aaPredicted RBP30.01■■■□□ 2.39
CASC3-203ENST00000418132 ATP10AO60312 1499 aa30■■■□□ 2.39
CASC3-203ENST00000418132 REREQ9P2R6 1566 aa29.99■■■□□ 2.39
CASC3-203ENST00000418132 PPP1R15AO75807 674 aaPredicted RBP29.98■■■□□ 2.39
CASC3-203ENST00000418132 E9PCH4 1651 aa29.97■■■□□ 2.39
CASC3-203ENST00000418132 LMTK2Q8IWU2 1503 aa29.97■■■□□ 2.39
CASC3-203ENST00000418132 PLA2R1Q13018 1463 aa29.95■■■□□ 2.38
CASC3-203ENST00000418132 ARHGEF40Q8TER5 1519 aa29.94■■■□□ 2.38
CASC3-203ENST00000418132 GGT6Q6P531 493 aa29.9■■■□□ 2.38
CASC3-203ENST00000418132 AGLP35573 1532 aa29.9■■■□□ 2.38
CASC3-203ENST00000418132 CEP152O94986 1710 aa29.9■■■□□ 2.38
CASC3-203ENST00000418132 EFCAB6Q5THR3 1501 aa29.9■■■□□ 2.38
CASC3-203ENST00000418132 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
CASC3-203ENST00000418132 CCDC144AA2RUR9 1427 aa29.87■■■□□ 2.37
CASC3-203ENST00000418132 PTPRTO14522 1441 aa29.86■■■□□ 2.37
CASC3-203ENST00000418132 ABCC3O15438 1527 aa29.85■■■□□ 2.37
CASC3-203ENST00000418132 SPHKAPQ2M3C7 1700 aa29.85■■■□□ 2.37
CASC3-203ENST00000418132 TRPM2O94759 1503 aa29.83■■■□□ 2.37
CASC3-203ENST00000418132 ZC3H13Q5T200 1668 aaKnown RBP29.82■■■□□ 2.36
CASC3-203ENST00000418132 SIGLEC1Q9BZZ2 1709 aa29.81■■■□□ 2.36
CASC3-203ENST00000418132 WASHC2CQ9Y4E1 1318 aa29.81■■■□□ 2.36
CASC3-203ENST00000418132 CAMSAP1Q5T5Y3 1602 aa29.78■■■□□ 2.36
CASC3-203ENST00000418132 ZNF316A6NFI3 1004 aaPredicted RBP29.77■■■□□ 2.36
CASC3-203ENST00000418132 NPATQ14207 1427 aa29.75■■■□□ 2.35
CASC3-203ENST00000418132 ARHGAP31Q2M1Z3 1444 aa29.72■■■□□ 2.35
CASC3-203ENST00000418132 PPP6R1Q9UPN7 881 aa29.72■■■□□ 2.35
CASC3-203ENST00000418132 CLTCL1P53675 1640 aa29.71■■■□□ 2.35
CASC3-203ENST00000418132 SPATA31E1Q6ZUB1 1445 aa29.67■■■□□ 2.34
CASC3-203ENST00000418132 CNTLNQ9NXG0 1405 aa29.65■■■□□ 2.34
CASC3-203ENST00000418132 NBPF8Q3BBV2 869 aa29.65■■■□□ 2.34
CASC3-203ENST00000418132 UHRF1BP1Q6BDS2 1440 aa29.64■■■□□ 2.34
CASC3-203ENST00000418132 NOS1P29475 1434 aa29.63■■■□□ 2.33
CASC3-203ENST00000418132 NEURL4Q96JN8 1562 aa29.63■■■□□ 2.33
CASC3-203ENST00000418132 CFAP65Q6ZU64 1925 aaKnown RBP29.61■■■□□ 2.33
CASC3-203ENST00000418132 UGGT1Q9NYU2 1555 aa29.61■■■□□ 2.33
CASC3-203ENST00000418132 DCAF11Q8TEB1 546 aa29.6■■■□□ 2.33
CASC3-203ENST00000418132 RGL3Q3MIN7 710 aa29.59■■■□□ 2.33
CASC3-203ENST00000418132 CLTCQ00610 1675 aaKnown RBP29.59■■■□□ 2.33
CASC3-203ENST00000418132 KIF1BO60333 1816 aa29.57■■■□□ 2.32
CASC3-203ENST00000418132 MLECQ14165 292 aa29.56■■■□□ 2.32
CASC3-203ENST00000418132 SYNMO15061 1565 aa29.56■■■□□ 2.32
CASC3-203ENST00000418132 PREX1Q8TCU6 1659 aa29.55■■■□□ 2.32
CASC3-203ENST00000418132 PIK3C2BO00750 1634 aa29.54■■■□□ 2.32
CASC3-203ENST00000418132 KDM2AQ9Y2K7 1162 aa29.53■■■□□ 2.32
CASC3-203ENST00000418132 ARID4BQ4LE39 1312 aaPredicted RBP29.53■■■□□ 2.32
CASC3-203ENST00000418132 PRAG1Q86YV5 1406 aa29.5■■■□□ 2.31
CASC3-203ENST00000418132 ADGRB3O60242 1522 aa29.5■■■□□ 2.31
CASC3-203ENST00000418132 ZNF326Q5BKZ1 582 aaKnown RBP29.5■■■□□ 2.31
CASC3-203ENST00000418132 RALGAPBQ86X10 1494 aa29.49■■■□□ 2.31
CASC3-203ENST00000418132 STAC3Q96MF2 364 aa29.48■■■□□ 2.31
CASC3-203ENST00000418132 ERVK-7P63135 1459 aa29.48■■■□□ 2.31
CASC3-203ENST00000418132 MROH2AA6NES4 1674 aa29.48■■■□□ 2.31
CASC3-203ENST00000418132 ESF1Q9H501 851 aaKnown RBP29.45■■■□□ 2.31
CASC3-203ENST00000418132 SLC52A1Q9NWF4 448 aa29.44■■■□□ 2.3
CASC3-203ENST00000418132 SPATA31D1Q6ZQQ2 1576 aa29.44■■■□□ 2.3
CASC3-203ENST00000418132 TRPM1Q7Z4N2 1603 aa29.43■■■□□ 2.3
CASC3-203ENST00000418132 FBXO31Q5XUX0 539 aaPredicted RBP29.43■■■□□ 2.3
CASC3-203ENST00000418132 IFT172Q9UG01 1749 aa29.42■■■□□ 2.3
CASC3-203ENST00000418132 ZMYM3Q14202 1370 aa29.42■■■□□ 2.3
CASC3-203ENST00000418132 EIF4G2P78344 907 aaKnown RBP eCLIP29.41■■■□□ 2.3
CASC3-203ENST00000418132 MADDQ8WXG6 1647 aa29.4■■■□□ 2.3
CASC3-203ENST00000418132 IDI1Q13907 227 aa29.39■■■□□ 2.3
CASC3-203ENST00000418132 MYOM2P54296 1465 aa29.38■■■□□ 2.29
CASC3-203ENST00000418132 HSPA5P11021 654 aaKnown RBP29.38■■■□□ 2.29
CASC3-203ENST00000418132 DIEXFQ68CQ4 756 aaKnown RBP29.37■■■□□ 2.29
CASC3-203ENST00000418132 HIRIP3Q9BW71 556 aaPredicted RBP29.37■■■□□ 2.29
CASC3-203ENST00000418132 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
CASC3-203ENST00000418132 RPGRIP1LQ68CZ1 1315 aa29.33■■■□□ 2.29
CASC3-203ENST00000418132 GPRASP1Q5JY77 1395 aa29.33■■■□□ 2.29
CASC3-203ENST00000418132 PPLO60437 1756 aa29.33■■■□□ 2.29
CASC3-203ENST00000418132 TMEM131LA2VDJ0 1609 aa29.33■■■□□ 2.29
CASC3-203ENST00000418132 ROCK2O75116 1388 aaKnown RBP29.33■■■□□ 2.29
CASC3-203ENST00000418132 FER1L4A9Z1Z3 1794 aa29.32■■■□□ 2.28
CASC3-203ENST00000418132 LAMC1P11047 1609 aa29.31■■■□□ 2.28
CASC3-203ENST00000418132 CARD11Q9BXL7 1154 aa29.31■■■□□ 2.28
CASC3-203ENST00000418132 NRXN1Q9ULB1 1477 aa29.3■■■□□ 2.28
CASC3-203ENST00000418132 USP47Q96K76 1375 aa29.3■■■□□ 2.28
CASC3-203ENST00000418132 KIAA1210Q9ULL0 1709 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms