RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ARSIQ5FYB1 569 aa10.85□□□□□ -0.67
NIFKP3-201ENST00000417799 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
NIFKP3-201ENST00000417799 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
NIFKP3-201ENST00000417799 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
NIFKP3-201ENST00000417799 NUDT7P0C024 238 aa10.84□□□□□ -0.67
NIFKP3-201ENST00000417799 PTGDRQ13258 359 aa10.84□□□□□ -0.67
NIFKP3-201ENST00000417799 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.67
NIFKP3-201ENST00000417799 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
NIFKP3-201ENST00000417799 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
NIFKP3-201ENST00000417799 TRIM66O15016 1216 aa10.83□□□□□ -0.68
NIFKP3-201ENST00000417799 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
NIFKP3-201ENST00000417799 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
NIFKP3-201ENST00000417799 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
NIFKP3-201ENST00000417799 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
NIFKP3-201ENST00000417799 IRF6O14896 467 aa10.81□□□□□ -0.68
NIFKP3-201ENST00000417799 FECHP22830 423 aa10.81□□□□□ -0.68
NIFKP3-201ENST00000417799 FOSBP53539 338 aa10.81□□□□□ -0.68
NIFKP3-201ENST00000417799 CDHR5Q9HBB8 845 aa10.81□□□□□ -0.68
NIFKP3-201ENST00000417799 ZNF454Q8N9F8 522 aa10.8□□□□□ -0.68
NIFKP3-201ENST00000417799 SNPHO15079 494 aa10.79□□□□□ -0.68
NIFKP3-201ENST00000417799 PDE4DQ08499 809 aa10.79□□□□□ -0.68
NIFKP3-201ENST00000417799 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
NIFKP3-201ENST00000417799 CCDC102AQ96A19 550 aa10.79□□□□□ -0.68
NIFKP3-201ENST00000417799 NPDC1Q9NQX5 325 aaPredicted RBP10.79□□□□□ -0.68
NIFKP3-201ENST00000417799 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
NIFKP3-201ENST00000417799 SHROOM4Q9ULL8 1493 aa10.77□□□□□ -0.69
NIFKP3-201ENST00000417799 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
NIFKP3-201ENST00000417799 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
NIFKP3-201ENST00000417799 C6orf132Q5T0Z8 1188 aa10.74□□□□□ -0.69
NIFKP3-201ENST00000417799 LHX6Q9UPM6 363 aa10.74□□□□□ -0.69
NIFKP3-201ENST00000417799 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
NIFKP3-201ENST00000417799 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
NIFKP3-201ENST00000417799 ADAM33Q9BZ11 813 aa10.72□□□□□ -0.69
NIFKP3-201ENST00000417799 AMHR2Q16671 573 aa10.71□□□□□ -0.69
NIFKP3-201ENST00000417799 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
NIFKP3-201ENST00000417799 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
NIFKP3-201ENST00000417799 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
NIFKP3-201ENST00000417799 PPP4R3BQ5MIZ7 849 aa10.7□□□□□ -0.7
NIFKP3-201ENST00000417799 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
NIFKP3-201ENST00000417799 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
NIFKP3-201ENST00000417799 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
NIFKP3-201ENST00000417799 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
NIFKP3-201ENST00000417799 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
NIFKP3-201ENST00000417799 IL27Q8NEV9 243 aa10.66□□□□□ -0.7
NIFKP3-201ENST00000417799 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.7
NIFKP3-201ENST00000417799 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
NIFKP3-201ENST00000417799 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
NIFKP3-201ENST00000417799 PRSS12P56730 875 aa10.63□□□□□ -0.71
NIFKP3-201ENST00000417799 BICRAQ9NZM4 1560 aa10.62□□□□□ -0.71
NIFKP3-201ENST00000417799 OATP04181 439 aa10.62□□□□□ -0.71
NIFKP3-201ENST00000417799 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
NIFKP3-201ENST00000417799 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
NIFKP3-201ENST00000417799 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
NIFKP3-201ENST00000417799 PTPREP23469 700 aa10.61□□□□□ -0.71
NIFKP3-201ENST00000417799 FAM117AQ9C073 453 aa10.61□□□□□ -0.71
NIFKP3-201ENST00000417799 COL9A1P20849 921 aa10.6□□□□□ -0.71
NIFKP3-201ENST00000417799 PHOX2BQ99453 314 aa10.6□□□□□ -0.71
NIFKP3-201ENST00000417799 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
NIFKP3-201ENST00000417799 EMP3P54852 163 aa10.59□□□□□ -0.71
NIFKP3-201ENST00000417799 GIGYF2Q6Y7W6 1299 aaKnown RBP10.59□□□□□ -0.71
NIFKP3-201ENST00000417799 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
NIFKP3-201ENST00000417799 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
NIFKP3-201ENST00000417799 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
NIFKP3-201ENST00000417799 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
NIFKP3-201ENST00000417799 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
NIFKP3-201ENST00000417799 CLCN1P35523 988 aa10.58□□□□□ -0.72
NIFKP3-201ENST00000417799 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
NIFKP3-201ENST00000417799 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
NIFKP3-201ENST00000417799 PXYLP1Q8TE99 480 aa10.57□□□□□ -0.72
NIFKP3-201ENST00000417799 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
NIFKP3-201ENST00000417799 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
NIFKP3-201ENST00000417799 HS3ST6Q96QI5 342 aa10.56□□□□□ -0.72
NIFKP3-201ENST00000417799 TMUB1Q9BVT8 246 aa10.56□□□□□ -0.72
NIFKP3-201ENST00000417799 GPCPD1Q9NPB8 672 aa10.56□□□□□ -0.72
NIFKP3-201ENST00000417799 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
NIFKP3-201ENST00000417799 FAM198AQ9UFP1 575 aa10.55□□□□□ -0.72
NIFKP3-201ENST00000417799 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
NIFKP3-201ENST00000417799 MS4A1P11836 297 aa10.54□□□□□ -0.72
NIFKP3-201ENST00000417799 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
NIFKP3-201ENST00000417799 ERBB3P21860 1342 aa10.54□□□□□ -0.72
NIFKP3-201ENST00000417799 NLRP7Q8WX94 980 aa10.53□□□□□ -0.72
NIFKP3-201ENST00000417799 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
NIFKP3-201ENST00000417799 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
NIFKP3-201ENST00000417799 FAM205CA6NFA0 338 aa10.51□□□□□ -0.73
NIFKP3-201ENST00000417799 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
NIFKP3-201ENST00000417799 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
NIFKP3-201ENST00000417799 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
NIFKP3-201ENST00000417799 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
NIFKP3-201ENST00000417799 EYA1Q99502 592 aa10.5□□□□□ -0.73
NIFKP3-201ENST00000417799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 PROX2Q3B8N5 592 aa10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 NUDT18Q6ZVK8 323 aa10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 ERICH6Q7L0X2 663 aa10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 FAM217BQ9NTX9 383 aaPredicted RBP10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
NIFKP3-201ENST00000417799 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
NIFKP3-201ENST00000417799 TATDN2Q93075 761 aa10.48□□□□□ -0.73
NIFKP3-201ENST00000417799 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
NIFKP3-201ENST00000417799 RCCD1A6NED2 376 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms