RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 GSE1Q14687 1217 aa23.41■■□□□ 1.34
NECAB1-201ENST00000417640 KIF21BO75037 1637 aa23.4■■□□□ 1.34
NECAB1-201ENST00000417640 E9PSI1 815 aa23.39■■□□□ 1.34
NECAB1-201ENST00000417640 SLC4A3P48751 1232 aa23.39■■□□□ 1.34
NECAB1-201ENST00000417640 CCDC7Q96M83 1385 aa23.38■■□□□ 1.33
NECAB1-201ENST00000417640 CGNL1Q0VF96 1302 aa23.37■■□□□ 1.33
NECAB1-201ENST00000417640 SPAG9O60271 1321 aaKnown RBP23.37■■□□□ 1.33
NECAB1-201ENST00000417640 HMMRO75330 724 aa23.37■■□□□ 1.33
NECAB1-201ENST00000417640 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
NECAB1-201ENST00000417640 FGD6Q6ZV73 1430 aa23.35■■□□□ 1.33
NECAB1-201ENST00000417640 IGF1RP08069 1367 aa23.35■■□□□ 1.33
NECAB1-201ENST00000417640 DDX11L8A8MPP1 907 aa23.35■■□□□ 1.33
NECAB1-201ENST00000417640 RRP7AQ9Y3A4 280 aaKnown RBP23.34■■□□□ 1.33
NECAB1-201ENST00000417640 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
NECAB1-201ENST00000417640 STK31Q9BXU1 1019 aa23.33■■□□□ 1.33
NECAB1-201ENST00000417640 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.33
NECAB1-201ENST00000417640 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
NECAB1-201ENST00000417640 FOXD4L1Q9NU39 408 aa23.32■■□□□ 1.32
NECAB1-201ENST00000417640 LMOD3Q0VAK6 560 aa23.31■■□□□ 1.32
NECAB1-201ENST00000417640 TULP1O00294 542 aaPredicted RBP23.31■■□□□ 1.32
NECAB1-201ENST00000417640 CHMP4AQ9BY43 222 aa23.3■■□□□ 1.32
NECAB1-201ENST00000417640 COG6Q9Y2V7 657 aa23.29■■□□□ 1.32
NECAB1-201ENST00000417640 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
NECAB1-201ENST00000417640 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
NECAB1-201ENST00000417640 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
NECAB1-201ENST00000417640 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
NECAB1-201ENST00000417640 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
NECAB1-201ENST00000417640 APAF1O14727 1248 aa23.28■■□□□ 1.32
NECAB1-201ENST00000417640 ST18O60284 1047 aa23.28■■□□□ 1.32
NECAB1-201ENST00000417640 NGEFQ8N5V2 710 aa23.28■■□□□ 1.32
NECAB1-201ENST00000417640 HTATSF1O43719 755 aaKnown RBP23.28■■□□□ 1.32
NECAB1-201ENST00000417640 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
NECAB1-201ENST00000417640 TRIM6-TRIM34B2RNG4 842 aa23.27■■□□□ 1.32
NECAB1-201ENST00000417640 RSPH6AQ9H0K4 717 aa23.25■■□□□ 1.31
NECAB1-201ENST00000417640 WASHC2AQ641Q2 1341 aa23.25■■□□□ 1.31
NECAB1-201ENST00000417640 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
NECAB1-201ENST00000417640 SLC4A10Q6U841 1118 aa23.23■■□□□ 1.31
NECAB1-201ENST00000417640 CUX1P39880 1505 aa23.22■■□□□ 1.31
NECAB1-201ENST00000417640 SKOR2Q2VWA4 1001 aaPredicted RBP23.22■■□□□ 1.31
NECAB1-201ENST00000417640 CSPP1Q1MSJ5 1256 aa23.21■■□□□ 1.31
NECAB1-201ENST00000417640 WASHC2CQ9Y4E1 1318 aa23.21■■□□□ 1.31
NECAB1-201ENST00000417640 HDAC5Q9UQL6 1122 aa23.21■■□□□ 1.31
NECAB1-201ENST00000417640 ANKRD45Q5TZF3 282 aa23.2■■□□□ 1.3
NECAB1-201ENST00000417640 GNL2Q13823 731 aaKnown RBP23.2■■□□□ 1.3
NECAB1-201ENST00000417640 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
NECAB1-201ENST00000417640 GPATCH3Q96I76 525 aa23.19■■□□□ 1.3
NECAB1-201ENST00000417640 PHF14O94880 888 aa23.19■■□□□ 1.3
NECAB1-201ENST00000417640 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
NECAB1-201ENST00000417640 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
NECAB1-201ENST00000417640 ARID3AQ99856 593 aa23.18■■□□□ 1.3
NECAB1-201ENST00000417640 CSB-PGBD3P0DP91 1061 aa23.17■■□□□ 1.3
NECAB1-201ENST00000417640 NOL8Q76FK4 1167 aaKnown RBP23.17■■□□□ 1.3
NECAB1-201ENST00000417640 TMX4Q9H1E5 349 aaPredicted RBP23.17■■□□□ 1.3
NECAB1-201ENST00000417640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.16■■□□□ 1.3
NECAB1-201ENST00000417640 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
NECAB1-201ENST00000417640 PAK3O75914 559 aaPredicted RBP23.16■■□□□ 1.3
NECAB1-201ENST00000417640 DDX19BQ9UMR2 479 aa23.15■■□□□ 1.3
NECAB1-201ENST00000417640 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
NECAB1-201ENST00000417640 MIA2Q96PC5 1412 aa23.14■■□□□ 1.29
NECAB1-201ENST00000417640 ARAP1Q96P48 1450 aa23.14■■□□□ 1.29
NECAB1-201ENST00000417640 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
NECAB1-201ENST00000417640 CASKIN1Q8WXD9 1431 aa23.13■■□□□ 1.29
NECAB1-201ENST00000417640 HSP90AA2PQ14568 343 aaPredicted RBP23.13■■□□□ 1.29
NECAB1-201ENST00000417640 ELL2O00472 640 aaPredicted RBP23.13■■□□□ 1.29
NECAB1-201ENST00000417640 CHMP5Q9NZZ3 219 aa23.13■■□□□ 1.29
NECAB1-201ENST00000417640 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
NECAB1-201ENST00000417640 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
NECAB1-201ENST00000417640 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
NECAB1-201ENST00000417640 FOXD4L5Q5VV16 416 aaPredicted RBP23.1■■□□□ 1.29
NECAB1-201ENST00000417640 FOXD4L4Q8WXT5 416 aaPredicted RBP23.1■■□□□ 1.29
NECAB1-201ENST00000417640 NCOA2Q15596 1464 aa23.1■■□□□ 1.29
NECAB1-201ENST00000417640 EID1Q9Y6B2 187 aa23.1■■□□□ 1.29
NECAB1-201ENST00000417640 VGFO15240 615 aaPredicted RBP23.09■■□□□ 1.29
NECAB1-201ENST00000417640 TPM4P67936 248 aa23.09■■□□□ 1.29
NECAB1-201ENST00000417640 ISY1Q9ULR0 285 aaKnown RBP23.09■■□□□ 1.29
NECAB1-201ENST00000417640 KIF16BQ96L93 1317 aa23.09■■□□□ 1.29
NECAB1-201ENST00000417640 FYCO1Q9BQS8 1478 aa23.08■■□□□ 1.29
NECAB1-201ENST00000417640 NFKBIBQ15653 356 aa23.08■■□□□ 1.29
NECAB1-201ENST00000417640 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
NECAB1-201ENST00000417640 AAMPQ13685 434 aa23.07■■□□□ 1.28
NECAB1-201ENST00000417640 PTPRGP23470 1445 aa23.07■■□□□ 1.28
NECAB1-201ENST00000417640 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
NECAB1-201ENST00000417640 HSP90B1P14625 803 aaKnown RBP23.07■■□□□ 1.28
NECAB1-201ENST00000417640 AMPHP49418 695 aa23.06■■□□□ 1.28
NECAB1-201ENST00000417640 STAC3Q96MF2 364 aa23.05■■□□□ 1.28
NECAB1-201ENST00000417640 CCDC9Q9Y3X0 531 aaKnown RBP23.04■■□□□ 1.28
NECAB1-201ENST00000417640 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
NECAB1-201ENST00000417640 ANKRD50Q9ULJ7 1429 aa23.04■■□□□ 1.28
NECAB1-201ENST00000417640 RILPL2Q969X0 211 aa23.03■■□□□ 1.28
NECAB1-201ENST00000417640 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
NECAB1-201ENST00000417640 REC8O95072 547 aa23.03■■□□□ 1.28
NECAB1-201ENST00000417640 ATP6V1DQ9Y5K8 247 aa23.03■■□□□ 1.28
NECAB1-201ENST00000417640 ADAMTS8Q9UP79 889 aa23.02■■□□□ 1.27
NECAB1-201ENST00000417640 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
NECAB1-201ENST00000417640 GORABQ5T7V8 394 aa23.01■■□□□ 1.27
NECAB1-201ENST00000417640 COG3Q96JB2 828 aa23.01■■□□□ 1.27
NECAB1-201ENST00000417640 API5Q9BZZ5 524 aaKnown RBP23.01■■□□□ 1.27
NECAB1-201ENST00000417640 RIPK4P57078 832 aa23■■□□□ 1.27
NECAB1-201ENST00000417640 KIF3AQ9Y496 699 aa23■■□□□ 1.27
NECAB1-201ENST00000417640 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms