RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 KIF15Q9NS87 1388 aa25.28■■□□□ 1.64
DDR1-231ENST00000417521 FAM135AQ9P2D6 1515 aa25.28■■□□□ 1.64
DDR1-231ENST00000417521 RRP7BPQ9NSQ0 103 aa25.28■■□□□ 1.64
DDR1-231ENST00000417521 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
DDR1-231ENST00000417521 CLTCQ00610 1675 aaKnown RBP25.26■■□□□ 1.63
DDR1-231ENST00000417521 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
DDR1-231ENST00000417521 KDM5DQ9BY66 1539 aa25.24■■□□□ 1.63
DDR1-231ENST00000417521 ILDR2Q71H61 639 aa25.24■■□□□ 1.63
DDR1-231ENST00000417521 CHIC2Q9UKJ5 165 aa25.24■■□□□ 1.63
DDR1-231ENST00000417521 ANKRD30AQ9BXX3 1397 aa25.24■■□□□ 1.63
DDR1-231ENST00000417521 DMRT2Q9Y5R5 561 aa25.23■■□□□ 1.63
DDR1-231ENST00000417521 DNMT1P26358 1616 aaKnown RBP25.23■■□□□ 1.63
DDR1-231ENST00000417521 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
DDR1-231ENST00000417521 NCOA1Q15788 1441 aa25.2■■□□□ 1.62
DDR1-231ENST00000417521 FBXO31Q5XUX0 539 aaPredicted RBP25.2■■□□□ 1.62
DDR1-231ENST00000417521 PZPP20742 1482 aa25.19■■□□□ 1.62
DDR1-231ENST00000417521 EIF2AK4Q9P2K8 1649 aaKnown RBP25.18■■□□□ 1.62
DDR1-231ENST00000417521 RNF17Q9BXT8 1623 aaKnown RBP25.17■■□□□ 1.62
DDR1-231ENST00000417521 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
DDR1-231ENST00000417521 CROCC2H7BZ55 1655 aa25.15■■□□□ 1.62
DDR1-231ENST00000417521 TNRQ92752 1358 aa25.15■■□□□ 1.62
DDR1-231ENST00000417521 DISP3Q9P2K9 1392 aa25.14■■□□□ 1.62
DDR1-231ENST00000417521 ADGRL2O95490 1459 aa25.14■■□□□ 1.61
DDR1-231ENST00000417521 ABCC3O15438 1527 aa25.13■■□□□ 1.61
DDR1-231ENST00000417521 PTPRTO14522 1441 aa25.1■■□□□ 1.61
DDR1-231ENST00000417521 MROH1Q8NDA8 1641 aa25.09■■□□□ 1.61
DDR1-231ENST00000417521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.09■■□□□ 1.61
DDR1-231ENST00000417521 A2ML1A8K2U0 1454 aa25.09■■□□□ 1.61
DDR1-231ENST00000417521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.09■■□□□ 1.61
DDR1-231ENST00000417521 KANK1Q14678 1352 aa25.08■■□□□ 1.61
DDR1-231ENST00000417521 CEP170BQ9Y4F5 1589 aaPredicted RBP25.07■■□□□ 1.6
DDR1-231ENST00000417521 PKD2Q13563 968 aa25.07■■□□□ 1.6
DDR1-231ENST00000417521 MYO3AQ8NEV4 1616 aa25.07■■□□□ 1.6
DDR1-231ENST00000417521 PLA2R1Q13018 1463 aa25.06■■□□□ 1.6
DDR1-231ENST00000417521 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
DDR1-231ENST00000417521 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
DDR1-231ENST00000417521 STRCQ7RTU9 1775 aa25.05■■□□□ 1.6
DDR1-231ENST00000417521 ZC3H13Q5T200 1668 aaKnown RBP25.05■■□□□ 1.6
DDR1-231ENST00000417521 ARHGAP31Q2M1Z3 1444 aa25.04■■□□□ 1.6
DDR1-231ENST00000417521 ANKRD50Q9ULJ7 1429 aa25.04■■□□□ 1.6
DDR1-231ENST00000417521 NLRP1Q9C000 1473 aa25.04■■□□□ 1.6
DDR1-231ENST00000417521 NCKAP5LQ9HCH0 1330 aa25.04■■□□□ 1.6
DDR1-231ENST00000417521 ROCK1Q13464 1354 aa25.03■■□□□ 1.6
DDR1-231ENST00000417521 THEMISQ8N1K5 641 aaPredicted RBP25.02■■□□□ 1.6
DDR1-231ENST00000417521 ZNF142P52746 1687 aaPredicted RBP25.02■■□□□ 1.6
DDR1-231ENST00000417521 ERVK-7P63135 1459 aa25■■□□□ 1.59
DDR1-231ENST00000417521 CERKQ8TCT0 537 aa25■■□□□ 1.59
DDR1-231ENST00000417521 SPATA31D1Q6ZQQ2 1576 aa25■■□□□ 1.59
DDR1-231ENST00000417521 ITGAEP38570 1179 aa24.98■■□□□ 1.59
DDR1-231ENST00000417521 DEPDC5O75140 1603 aa24.98■■□□□ 1.59
DDR1-231ENST00000417521 LMTK2Q8IWU2 1503 aa24.97■■□□□ 1.59
DDR1-231ENST00000417521 RRBP1Q9P2E9 1410 aaKnown RBP24.95■■□□□ 1.58
DDR1-231ENST00000417521 ANKLE2Q86XL3 938 aa24.95■■□□□ 1.58
DDR1-231ENST00000417521 VWDEQ8N2E2 1590 aa24.95■■□□□ 1.58
DDR1-231ENST00000417521 UGGT1Q9NYU2 1555 aa24.93■■□□□ 1.58
DDR1-231ENST00000417521 CEP152O94986 1710 aa24.91■■□□□ 1.58
DDR1-231ENST00000417521 ZNF335Q9H4Z2 1342 aaPredicted RBP24.84■■□□□ 1.57
DDR1-231ENST00000417521 NOS1P29475 1434 aa24.83■■□□□ 1.57
DDR1-231ENST00000417521 IDI1Q13907 227 aa24.83■■□□□ 1.57
DDR1-231ENST00000417521 EFCAB6Q5THR3 1501 aa24.83■■□□□ 1.57
DDR1-231ENST00000417521 SLC52A1Q9NWF4 448 aa24.83■■□□□ 1.56
DDR1-231ENST00000417521 LTBP4Q8N2S1 1624 aa24.82■■□□□ 1.56
DDR1-231ENST00000417521 RPRD2Q5VT52 1461 aaKnown RBP24.82■■□□□ 1.56
DDR1-231ENST00000417521 MED14O60244 1454 aa24.81■■□□□ 1.56
DDR1-231ENST00000417521 STAG3Q9UJ98 1225 aa24.8■■□□□ 1.56
DDR1-231ENST00000417521 NUP155O75694 1391 aa24.8■■□□□ 1.56
DDR1-231ENST00000417521 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
DDR1-231ENST00000417521 UNC13BO14795 1591 aa24.78■■□□□ 1.56
DDR1-231ENST00000417521 NEURL4Q96JN8 1562 aa24.78■■□□□ 1.56
DDR1-231ENST00000417521 TXNDC2Q86VQ3 553 aa24.77■■□□□ 1.56
DDR1-231ENST00000417521 EID1Q9Y6B2 187 aa24.76■■□□□ 1.55
DDR1-231ENST00000417521 LTKP29376 864 aa24.75■■□□□ 1.55
DDR1-231ENST00000417521 ARHGAP23Q9P227 1491 aa24.75■■□□□ 1.55
DDR1-231ENST00000417521 SLIT1O75093 1534 aa24.74■■□□□ 1.55
DDR1-231ENST00000417521 TMEM2Q9UHN6 1383 aa24.74■■□□□ 1.55
DDR1-231ENST00000417521 IQSEC2Q5JU85 1478 aa24.73■■□□□ 1.55
DDR1-231ENST00000417521 NAIPQ13075 1403 aa24.73■■□□□ 1.55
DDR1-231ENST00000417521 SCAF11Q99590 1463 aaKnown RBP24.72■■□□□ 1.55
DDR1-231ENST00000417521 SYNMO15061 1565 aa24.72■■□□□ 1.55
DDR1-231ENST00000417521 CFAP65Q6ZU64 1925 aaKnown RBP24.72■■□□□ 1.55
DDR1-231ENST00000417521 TET3O43151 1660 aa24.72■■□□□ 1.55
DDR1-231ENST00000417521 UBR1Q8IWV7 1749 aa24.71■■□□□ 1.55
DDR1-231ENST00000417521 POLR1AO95602 1720 aaPredicted RBP24.69■■□□□ 1.54
DDR1-231ENST00000417521 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
DDR1-231ENST00000417521 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
DDR1-231ENST00000417521 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
DDR1-231ENST00000417521 KDM5AP29375 1690 aaKnown RBP24.63■■□□□ 1.53
DDR1-231ENST00000417521 ADGRB3O60242 1522 aa24.63■■□□□ 1.53
DDR1-231ENST00000417521 CPS1P31327 1500 aa24.63■■□□□ 1.53
DDR1-231ENST00000417521 GCC2Q8IWJ2 1684 aa24.63■■□□□ 1.53
DDR1-231ENST00000417521 HDGFP51858 240 aaKnown RBP24.63■■□□□ 1.53
DDR1-231ENST00000417521 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
DDR1-231ENST00000417521 CHGAP10645 457 aaKnown RBP24.59■■□□□ 1.53
DDR1-231ENST00000417521 E9PCH4 1651 aa24.59■■□□□ 1.53
DDR1-231ENST00000417521 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
DDR1-231ENST00000417521 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.52
DDR1-231ENST00000417521 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.56■■□□□ 1.52
DDR1-231ENST00000417521 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
DDR1-231ENST00000417521 RIMS2Q9UQ26 1411 aa24.54■■□□□ 1.52
DDR1-231ENST00000417521 SLC26A8Q96RN1 970 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms