RNA–Protein interactions for RNA: ENST00000417500.5

ARPC4-202, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 5

Gene ARPC4, Length 957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-202ENST00000417500 NCOA1Q15788 1441 aa30.37■■■□□ 2.45
ARPC4-202ENST00000417500 CAMSAP1Q5T5Y3 1602 aa30.35■■■□□ 2.45
ARPC4-202ENST00000417500 MYO3AQ8NEV4 1616 aa30.33■■■□□ 2.45
ARPC4-202ENST00000417500 FBXO31Q5XUX0 539 aaPredicted RBP30.32■■■□□ 2.44
ARPC4-202ENST00000417500 PTPN23Q9H3S7 1636 aa30.32■■■□□ 2.44
ARPC4-202ENST00000417500 TNRQ92752 1358 aa30.31■■■□□ 2.44
ARPC4-202ENST00000417500 CEP170BQ9Y4F5 1589 aaPredicted RBP30.31■■■□□ 2.44
ARPC4-202ENST00000417500 FGD6Q6ZV73 1430 aa30.3■■■□□ 2.44
ARPC4-202ENST00000417500 PKD2Q13563 968 aa30.3■■■□□ 2.44
ARPC4-202ENST00000417500 NCKAP5LQ9HCH0 1330 aa30.29■■■□□ 2.44
ARPC4-202ENST00000417500 PZPP20742 1482 aa30.29■■■□□ 2.44
ARPC4-202ENST00000417500 DUOX2Q9NRD8 1548 aa30.27■■■□□ 2.44
ARPC4-202ENST00000417500 ZNF142P52746 1687 aaPredicted RBP30.27■■■□□ 2.44
ARPC4-202ENST00000417500 RRP7BPQ9NSQ0 103 aa30.27■■■□□ 2.44
ARPC4-202ENST00000417500 KIF15Q9NS87 1388 aa30.27■■■□□ 2.44
ARPC4-202ENST00000417500 A2ML1A8K2U0 1454 aa30.26■■■□□ 2.44
ARPC4-202ENST00000417500 ABCC5O15440 1437 aa30.26■■■□□ 2.43
ARPC4-202ENST00000417500 SHANK2Q9UPX8 1470 aa30.25■■■□□ 2.43
ARPC4-202ENST00000417500 PLA2R1Q13018 1463 aa30.25■■■□□ 2.43
ARPC4-202ENST00000417500 EIF2AK4Q9P2K8 1649 aaKnown RBP30.24■■■□□ 2.43
ARPC4-202ENST00000417500 DAPK1P53355 1430 aa30.23■■■□□ 2.43
ARPC4-202ENST00000417500 RNF17Q9BXT8 1623 aaKnown RBP30.22■■■□□ 2.43
ARPC4-202ENST00000417500 TCOF1Q13428 1488 aaKnown RBP30.22■■■□□ 2.43
ARPC4-202ENST00000417500 CHIC2Q9UKJ5 165 aa30.21■■■□□ 2.43
ARPC4-202ENST00000417500 FAM50AQ14320 339 aaKnown RBP30.2■■■□□ 2.43
ARPC4-202ENST00000417500 ANKRD30AQ9BXX3 1397 aa30.19■■■□□ 2.42
ARPC4-202ENST00000417500 THEMISQ8N1K5 641 aaPredicted RBP30.18■■■□□ 2.42
ARPC4-202ENST00000417500 CROCC2H7BZ55 1655 aa30.17■■■□□ 2.42
ARPC4-202ENST00000417500 ABCC3O15438 1527 aa30.17■■■□□ 2.42
ARPC4-202ENST00000417500 ERBINQ96RT1 1412 aa30.17■■■□□ 2.42
ARPC4-202ENST00000417500 DNMT1P26358 1616 aaKnown RBP30.17■■■□□ 2.42
ARPC4-202ENST00000417500 ZC3H13Q5T200 1668 aaKnown RBP30.17■■■□□ 2.42
ARPC4-202ENST00000417500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.16■■■□□ 2.423e-10■■□□□ 11.4
ARPC4-202ENST00000417500 NLRP1Q9C000 1473 aa30.15■■■□□ 2.42
ARPC4-202ENST00000417500 KANK1Q14678 1352 aa30.14■■■□□ 2.41
ARPC4-202ENST00000417500 ANKLE2Q86XL3 938 aa30.12■■■□□ 2.41
ARPC4-202ENST00000417500 UGGT1Q9NYU2 1555 aa30.08■■■□□ 2.41
ARPC4-202ENST00000417500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.08■■■□□ 2.414e-9■■□□□ 14.4
ARPC4-202ENST00000417500 ZNF335Q9H4Z2 1342 aaPredicted RBP30.08■■■□□ 2.41
ARPC4-202ENST00000417500 MROH1Q8NDA8 1641 aa30.07■■■□□ 2.4
ARPC4-202ENST00000417500 LTBP4Q8N2S1 1624 aa30.07■■■□□ 2.4
ARPC4-202ENST00000417500 ERVK-7P63135 1459 aa30.06■■■□□ 2.4
ARPC4-202ENST00000417500 CEP152O94986 1710 aa30.05■■■□□ 2.4
ARPC4-202ENST00000417500 SPATA31D1Q6ZQQ2 1576 aa30.04■■■□□ 2.4
ARPC4-202ENST00000417500 PRDM15P57071 1507 aaPredicted RBP30.04■■■□□ 2.4
ARPC4-202ENST00000417500 IQSEC2Q5JU85 1478 aa30.01■■■□□ 2.4
ARPC4-202ENST00000417500 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
ARPC4-202ENST00000417500 POLR1AO95602 1720 aaPredicted RBP29.98■■■□□ 2.39
ARPC4-202ENST00000417500 ADGRL2O95490 1459 aa29.98■■■□□ 2.39
ARPC4-202ENST00000417500 CFAP65Q6ZU64 1925 aaKnown RBP29.98■■■□□ 2.39
ARPC4-202ENST00000417500 STAG3Q9UJ98 1225 aa29.95■■■□□ 2.39
ARPC4-202ENST00000417500 DEPDC5O75140 1603 aa29.94■■■□□ 2.38
ARPC4-202ENST00000417500 NPHP4O75161 1426 aaPredicted RBP29.93■■■□□ 2.38
ARPC4-202ENST00000417500 ANKRD50Q9ULJ7 1429 aa29.92■■■□□ 2.38
ARPC4-202ENST00000417500 NEURL4Q96JN8 1562 aa29.91■■■□□ 2.38
ARPC4-202ENST00000417500 PPARGC1BQ86YN6 1023 aaKnown RBP29.91■■■□□ 2.38
ARPC4-202ENST00000417500 UBAP1LF5GYI3 381 aa29.9■■■□□ 2.38
ARPC4-202ENST00000417500 EID1Q9Y6B2 187 aa29.88■■■□□ 2.37
ARPC4-202ENST00000417500 MED14O60244 1454 aa29.87■■■□□ 2.37
ARPC4-202ENST00000417500 LMTK2Q8IWU2 1503 aa29.87■■■□□ 2.37
ARPC4-202ENST00000417500 ITGAEP38570 1179 aa29.86■■■□□ 2.37
ARPC4-202ENST00000417500 TXNDC2Q86VQ3 553 aa29.84■■■□□ 2.37
ARPC4-202ENST00000417500 VWDEQ8N2E2 1590 aa29.83■■■□□ 2.37
ARPC4-202ENST00000417500 CPS1P31327 1500 aa29.83■■■□□ 2.37
ARPC4-202ENST00000417500 UBR1Q8IWV7 1749 aa29.82■■■□□ 2.36
ARPC4-202ENST00000417500 ROCK1Q13464 1354 aa29.8■■■□□ 2.36
ARPC4-202ENST00000417500 IDI1Q13907 227 aa29.8■■■□□ 2.36
ARPC4-202ENST00000417500 SCAF11Q99590 1463 aaKnown RBP29.8■■■□□ 2.36
ARPC4-202ENST00000417500 IQGAP1P46940 1657 aa29.79■■■□□ 2.36
ARPC4-202ENST00000417500 EFCAB6Q5THR3 1501 aa29.78■■■□□ 2.36
ARPC4-202ENST00000417500 SLC52A1Q9NWF4 448 aa29.77■■■□□ 2.36
ARPC4-202ENST00000417500 TOM1O60784 492 aa29.76■■■□□ 2.35
ARPC4-202ENST00000417500 LTKP29376 864 aa29.76■■■□□ 2.35
ARPC4-202ENST00000417500 SLIT1O75093 1534 aa29.75■■■□□ 2.35
ARPC4-202ENST00000417500 SCAF1Q9H7N4 1312 aaKnown RBP29.74■■■□□ 2.35
ARPC4-202ENST00000417500 TMEM2Q9UHN6 1383 aa29.74■■■□□ 2.35
ARPC4-202ENST00000417500 PIK3C2BO00750 1634 aa29.74■■■□□ 2.35
ARPC4-202ENST00000417500 ARHGAP23Q9P227 1491 aa29.74■■■□□ 2.35
ARPC4-202ENST00000417500 RPRD2Q5VT52 1461 aaKnown RBP29.73■■■□□ 2.35
ARPC4-202ENST00000417500 NOS1P29475 1434 aa29.72■■■□□ 2.35
ARPC4-202ENST00000417500 PIP4K2BP78356 416 aa29.69■■■□□ 2.34
ARPC4-202ENST00000417500 SYNMO15061 1565 aa29.68■■■□□ 2.34
ARPC4-202ENST00000417500 TET3O43151 1660 aa29.66■■■□□ 2.34
ARPC4-202ENST00000417500 BCANQ96GW7 911 aa29.66■■■□□ 2.34
ARPC4-202ENST00000417500 KDM5AP29375 1690 aaKnown RBP29.66■■■□□ 2.34
ARPC4-202ENST00000417500 NUP155O75694 1391 aa29.65■■■□□ 2.34
ARPC4-202ENST00000417500 UNC13BO14795 1591 aa29.64■■■□□ 2.34
ARPC4-202ENST00000417500 HDGFP51858 240 aaKnown RBP29.64■■■□□ 2.34
ARPC4-202ENST00000417500 DISP3Q9P2K9 1392 aa29.63■■■□□ 2.33
ARPC4-202ENST00000417500 ADGRB3O60242 1522 aa29.62■■■□□ 2.33
ARPC4-202ENST00000417500 CHGAP10645 457 aaKnown RBP29.62■■■□□ 2.33
ARPC4-202ENST00000417500 GCC2Q8IWJ2 1684 aa29.6■■■□□ 2.33
ARPC4-202ENST00000417500 PPP1R15AO75807 674 aaPredicted RBP29.59■■■□□ 2.33
ARPC4-202ENST00000417500 LRRC7Q96NW7 1537 aa29.57■■■□□ 2.32
ARPC4-202ENST00000417500 RRBP1Q9P2E9 1410 aaKnown RBP29.56■■■□□ 2.32
ARPC4-202ENST00000417500 SLC26A8Q96RN1 970 aa29.55■■■□□ 2.32
ARPC4-202ENST00000417500 IQGAP3Q86VI3 1631 aa29.54■■■□□ 2.32
ARPC4-202ENST00000417500 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.52■■■□□ 2.32
ARPC4-202ENST00000417500 STRCP1A6NGW2 1772 aa29.52■■■□□ 2.32
ARPC4-202ENST00000417500 KCNA6P17658 529 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms