RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 KDM5DQ9BY66 1539 aa21.37■■□□□ 1.01
SEC22C-204ENST00000416880 PKD2Q13563 968 aa21.36■■□□□ 1.01
SEC22C-204ENST00000416880 CAMSAP1Q5T5Y3 1602 aa21.36■■□□□ 1.01
SEC22C-204ENST00000416880 ZNF142P52746 1687 aaPredicted RBP21.35■■□□□ 1.01
SEC22C-204ENST00000416880 PLA2R1Q13018 1463 aa21.34■■□□□ 1.01
SEC22C-204ENST00000416880 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
SEC22C-204ENST00000416880 PZPP20742 1482 aa21.33■■□□□ 1.01
SEC22C-204ENST00000416880 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1.01
SEC22C-204ENST00000416880 A2ML1A8K2U0 1454 aa21.32■■□□□ 1
SEC22C-204ENST00000416880 EIF2AK4Q9P2K8 1649 aaKnown RBP21.31■■□□□ 1
SEC22C-204ENST00000416880 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
SEC22C-204ENST00000416880 TNRQ92752 1358 aa21.31■■□□□ 1
SEC22C-204ENST00000416880 SHANK2Q9UPX8 1470 aa21.31■■□□□ 1
SEC22C-204ENST00000416880 DUOX2Q9NRD8 1548 aa21.3■■□□□ 1
SEC22C-204ENST00000416880 RNF17Q9BXT8 1623 aaKnown RBP21.3■■□□□ 1
SEC22C-204ENST00000416880 PTPN23Q9H3S7 1636 aa21.3■■□□□ 1
SEC22C-204ENST00000416880 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
SEC22C-204ENST00000416880 ABCC5O15440 1437 aa21.29■■□□□ 1
SEC22C-204ENST00000416880 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
SEC22C-204ENST00000416880 TCOF1Q13428 1488 aaKnown RBP21.28■■□□□ 1
SEC22C-204ENST00000416880 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
SEC22C-204ENST00000416880 ZC3H13Q5T200 1668 aaKnown RBP21.25■□□□□ 0.99
SEC22C-204ENST00000416880 DAPK1P53355 1430 aa21.25■□□□□ 0.99
SEC22C-204ENST00000416880 THEMISQ8N1K5 641 aaPredicted RBP21.25■□□□□ 0.99
SEC22C-204ENST00000416880 DNMT1P26358 1616 aaKnown RBP21.25■□□□□ 0.99
SEC22C-204ENST00000416880 NLRP1Q9C000 1473 aa21.25■□□□□ 0.99
SEC22C-204ENST00000416880 ERBINQ96RT1 1412 aa21.24■□□□□ 0.99
SEC22C-204ENST00000416880 RRP7BPQ9NSQ0 103 aa21.24■□□□□ 0.99
SEC22C-204ENST00000416880 ABCC3O15438 1527 aa21.24■□□□□ 0.99
SEC22C-204ENST00000416880 CROCC2H7BZ55 1655 aa21.23■□□□□ 0.99
SEC22C-204ENST00000416880 IQSEC2Q5JU85 1478 aa21.22■□□□□ 0.99
SEC22C-204ENST00000416880 LTBP4Q8N2S1 1624 aa21.22■□□□□ 0.99
SEC22C-204ENST00000416880 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
SEC22C-204ENST00000416880 MROH1Q8NDA8 1641 aa21.19■□□□□ 0.98
SEC22C-204ENST00000416880 ANKLE2Q86XL3 938 aa21.19■□□□□ 0.98
SEC22C-204ENST00000416880 ARHGAP31Q2M1Z3 1444 aa21.17■□□□□ 0.98
SEC22C-204ENST00000416880 SPATA31D1Q6ZQQ2 1576 aa21.17■□□□□ 0.98
SEC22C-204ENST00000416880 UGGT1Q9NYU2 1555 aa21.16■□□□□ 0.98
SEC22C-204ENST00000416880 KANK1Q14678 1352 aa21.16■□□□□ 0.98
SEC22C-204ENST00000416880 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
SEC22C-204ENST00000416880 PRDM15P57071 1507 aaPredicted RBP21.15■□□□□ 0.98
SEC22C-204ENST00000416880 ERVK-7P63135 1459 aa21.14■□□□□ 0.98
SEC22C-204ENST00000416880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.14■□□□□ 0.98
SEC22C-204ENST00000416880 ZNF335Q9H4Z2 1342 aaPredicted RBP21.14■□□□□ 0.97
SEC22C-204ENST00000416880 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
SEC22C-204ENST00000416880 ADGRL2O95490 1459 aa21.13■□□□□ 0.97
SEC22C-204ENST00000416880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.12■□□□□ 0.97
SEC22C-204ENST00000416880 CEP152O94986 1710 aa21.12■□□□□ 0.97
SEC22C-204ENST00000416880 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
SEC22C-204ENST00000416880 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
SEC22C-204ENST00000416880 MED14O60244 1454 aa21.1■□□□□ 0.97
SEC22C-204ENST00000416880 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.97
SEC22C-204ENST00000416880 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.97
SEC22C-204ENST00000416880 LMTK2Q8IWU2 1503 aa21.07■□□□□ 0.96
SEC22C-204ENST00000416880 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
SEC22C-204ENST00000416880 VWDEQ8N2E2 1590 aa21.05■□□□□ 0.96
SEC22C-204ENST00000416880 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
SEC22C-204ENST00000416880 CPS1P31327 1500 aa21.03■□□□□ 0.96
SEC22C-204ENST00000416880 UBAP1LF5GYI3 381 aa21.01■□□□□ 0.95
SEC22C-204ENST00000416880 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
SEC22C-204ENST00000416880 ROCK1Q13464 1354 aa20.99■□□□□ 0.95
SEC22C-204ENST00000416880 EID1Q9Y6B2 187 aa20.99■□□□□ 0.95
SEC22C-204ENST00000416880 SLIT1O75093 1534 aa20.99■□□□□ 0.95
SEC22C-204ENST00000416880 TXNDC2Q86VQ3 553 aa20.98■□□□□ 0.95
SEC22C-204ENST00000416880 SLC52A1Q9NWF4 448 aa20.98■□□□□ 0.95
SEC22C-204ENST00000416880 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
SEC22C-204ENST00000416880 ARHGAP23Q9P227 1491 aa20.98■□□□□ 0.95
SEC22C-204ENST00000416880 IQGAP1P46940 1657 aa20.98■□□□□ 0.95
SEC22C-204ENST00000416880 IDI1Q13907 227 aa20.97■□□□□ 0.95
SEC22C-204ENST00000416880 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
SEC22C-204ENST00000416880 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
SEC22C-204ENST00000416880 KDM5AP29375 1690 aaKnown RBP20.96■□□□□ 0.95
SEC22C-204ENST00000416880 NOS1P29475 1434 aa20.95■□□□□ 0.95
SEC22C-204ENST00000416880 EFCAB6Q5THR3 1501 aa20.95■□□□□ 0.94
SEC22C-204ENST00000416880 TOM1O60784 492 aa20.95■□□□□ 0.94
SEC22C-204ENST00000416880 LTKP29376 864 aa20.94■□□□□ 0.94
SEC22C-204ENST00000416880 TMEM2Q9UHN6 1383 aa20.94■□□□□ 0.94
SEC22C-204ENST00000416880 PIK3C2BO00750 1634 aa20.92■□□□□ 0.94
SEC22C-204ENST00000416880 TET3O43151 1660 aa20.89■□□□□ 0.93
SEC22C-204ENST00000416880 SYNMO15061 1565 aa20.89■□□□□ 0.93
SEC22C-204ENST00000416880 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
SEC22C-204ENST00000416880 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
SEC22C-204ENST00000416880 UNC13BO14795 1591 aa20.87■□□□□ 0.93
SEC22C-204ENST00000416880 ITGAEP38570 1179 aa20.85■□□□□ 0.93
SEC22C-204ENST00000416880 GCC2Q8IWJ2 1684 aa20.84■□□□□ 0.93
SEC22C-204ENST00000416880 ADGRB3O60242 1522 aa20.83■□□□□ 0.93
SEC22C-204ENST00000416880 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
SEC22C-204ENST00000416880 NUP155O75694 1391 aa20.82■□□□□ 0.92
SEC22C-204ENST00000416880 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
SEC22C-204ENST00000416880 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
SEC22C-204ENST00000416880 RRBP1Q9P2E9 1410 aaKnown RBP20.8■□□□□ 0.92
SEC22C-204ENST00000416880 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
SEC22C-204ENST00000416880 PIP4K2BP78356 416 aa20.8■□□□□ 0.92
SEC22C-204ENST00000416880 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
SEC22C-204ENST00000416880 KCNA6P17658 529 aa20.79■□□□□ 0.92
SEC22C-204ENST00000416880 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.78■□□□□ 0.92
SEC22C-204ENST00000416880 E9PCH4 1651 aa20.76■□□□□ 0.91
SEC22C-204ENST00000416880 SLC26A8Q96RN1 970 aa20.75■□□□□ 0.91
SEC22C-204ENST00000416880 ZFYVE9O95405 1425 aa20.74■□□□□ 0.91
SEC22C-204ENST00000416880 HSPA1LP34931 641 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms