RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 NBPF8Q3BBV2 869 aa15.18■□□□□ 0.02
SMPD4P1-201ENST00000416717 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
SMPD4P1-201ENST00000416717 MAGI2Q86UL8 1455 aa15.16■□□□□ 0.02
SMPD4P1-201ENST00000416717 DIP2BQ9P265 1576 aa15.14■□□□□ 0.01
SMPD4P1-201ENST00000416717 NEO1Q92859 1461 aa15.14■□□□□ 0.01
SMPD4P1-201ENST00000416717 DHX29Q7Z478 1369 aaKnown RBP15.14■□□□□ 0.01
SMPD4P1-201ENST00000416717 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
SMPD4P1-201ENST00000416717 KDM5CP41229 1560 aa15.13■□□□□ 0.01
SMPD4P1-201ENST00000416717 GLI2P10070 1586 aa15.13■□□□□ 0.01
SMPD4P1-201ENST00000416717 HECW2Q9P2P5 1572 aa15.13■□□□□ 0.01
SMPD4P1-201ENST00000416717 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
SMPD4P1-201ENST00000416717 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
SMPD4P1-201ENST00000416717 PLA2R1Q13018 1463 aa15.12■□□□□ 0.01
SMPD4P1-201ENST00000416717 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
SMPD4P1-201ENST00000416717 RGL3Q3MIN7 710 aa15.12■□□□□ 0.01
SMPD4P1-201ENST00000416717 E9PCH4 1651 aa15.11■□□□□ 0.01
SMPD4P1-201ENST00000416717 HSPA5P11021 654 aaKnown RBP15.11■□□□□ 0.01
SMPD4P1-201ENST00000416717 A2MP01023 1474 aa15.1■□□□□ 0.01
SMPD4P1-201ENST00000416717 DCAF11Q8TEB1 546 aa15.1■□□□□ 0.01
SMPD4P1-201ENST00000416717 ABCA6Q8N139 1617 aa15.1■□□□□ 0.01
SMPD4P1-201ENST00000416717 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
SMPD4P1-201ENST00000416717 RICTORQ6R327 1708 aa15.09■□□□□ 0.01
SMPD4P1-201ENST00000416717 KANK1Q14678 1352 aa15.09■□□□□ 0.01
SMPD4P1-201ENST00000416717 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
SMPD4P1-201ENST00000416717 CFAP65Q6ZU64 1925 aaKnown RBP15.08■□□□□ 0
SMPD4P1-201ENST00000416717 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
SMPD4P1-201ENST00000416717 GGT6Q6P531 493 aa15.08■□□□□ 0
SMPD4P1-201ENST00000416717 MROH1Q8NDA8 1641 aa15.07■□□□□ 0
SMPD4P1-201ENST00000416717 PPRC1Q5VV67 1664 aaKnown RBP15.07■□□□□ 0
SMPD4P1-201ENST00000416717 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
SMPD4P1-201ENST00000416717 TET3O43151 1660 aa15.06■□□□□ 0
SMPD4P1-201ENST00000416717 KIF13AQ9H1H9 1805 aa15.06■□□□□ 0
SMPD4P1-201ENST00000416717 FRMPD1Q5SYB0 1578 aa15.06■□□□□ 0
SMPD4P1-201ENST00000416717 CEP152O94986 1710 aa15.06■□□□□ 0
SMPD4P1-201ENST00000416717 PRDM15P57071 1507 aaPredicted RBP15.05■□□□□ -0
SMPD4P1-201ENST00000416717 SPHKAPQ2M3C7 1700 aa15.05■□□□□ -0
SMPD4P1-201ENST00000416717 VWDEQ8N2E2 1590 aa15.04■□□□□ -0
SMPD4P1-201ENST00000416717 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
SMPD4P1-201ENST00000416717 YEATS2Q9ULM3 1422 aa15.03■□□□□ -0
SMPD4P1-201ENST00000416717 ATP10AO60312 1499 aa15.03■□□□□ -0
SMPD4P1-201ENST00000416717 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
SMPD4P1-201ENST00000416717 RNF17Q9BXT8 1623 aaKnown RBP15.01□□□□□ -0.01
SMPD4P1-201ENST00000416717 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
SMPD4P1-201ENST00000416717 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
SMPD4P1-201ENST00000416717 TRPM2O94759 1503 aa14.99□□□□□ -0.01
SMPD4P1-201ENST00000416717 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
SMPD4P1-201ENST00000416717 C11orf95C9JLR9 678 aaPredicted RBP14.99□□□□□ -0.01
SMPD4P1-201ENST00000416717 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
SMPD4P1-201ENST00000416717 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
SMPD4P1-201ENST00000416717 CARD11Q9BXL7 1154 aa14.98□□□□□ -0.01
SMPD4P1-201ENST00000416717 EFCAB6Q5THR3 1501 aa14.98□□□□□ -0.01
SMPD4P1-201ENST00000416717 USP47Q96K76 1375 aa14.97□□□□□ -0.01
SMPD4P1-201ENST00000416717 RALGAPBQ86X10 1494 aa14.97□□□□□ -0.01
SMPD4P1-201ENST00000416717 PTPRTO14522 1441 aa14.97□□□□□ -0.01
SMPD4P1-201ENST00000416717 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.01
SMPD4P1-201ENST00000416717 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
SMPD4P1-201ENST00000416717 PRAG1Q86YV5 1406 aa14.95□□□□□ -0.02
SMPD4P1-201ENST00000416717 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
SMPD4P1-201ENST00000416717 TRPM1Q7Z4N2 1603 aa14.94□□□□□ -0.02
SMPD4P1-201ENST00000416717 NBPF1Q3BBV0 1214 aa14.94□□□□□ -0.02
SMPD4P1-201ENST00000416717 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
SMPD4P1-201ENST00000416717 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
SMPD4P1-201ENST00000416717 LMTK2Q8IWU2 1503 aa14.93□□□□□ -0.02
SMPD4P1-201ENST00000416717 KIF1BO60333 1816 aa14.93□□□□□ -0.02
SMPD4P1-201ENST00000416717 ABCC3O15438 1527 aa14.93□□□□□ -0.02
SMPD4P1-201ENST00000416717 COL17A1Q9UMD9 1497 aaPredicted RBP14.93□□□□□ -0.02
SMPD4P1-201ENST00000416717 NPATQ14207 1427 aa14.92□□□□□ -0.02
SMPD4P1-201ENST00000416717 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
SMPD4P1-201ENST00000416717 CAMSAP1Q5T5Y3 1602 aa14.92□□□□□ -0.02
SMPD4P1-201ENST00000416717 CCDC7Q96M83 1385 aa14.91□□□□□ -0.02
SMPD4P1-201ENST00000416717 POLR1AO95602 1720 aaPredicted RBP14.91□□□□□ -0.02
SMPD4P1-201ENST00000416717 KIF7Q2M1P5 1343 aa14.9□□□□□ -0.02
SMPD4P1-201ENST00000416717 ST20-MTHFSA0A0A6YYL1 179 aa14.9□□□□□ -0.02
SMPD4P1-201ENST00000416717 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
SMPD4P1-201ENST00000416717 ANP32CO43423 234 aa14.89□□□□□ -0.03
SMPD4P1-201ENST00000416717 MROH2AA6NES4 1674 aa14.89□□□□□ -0.03
SMPD4P1-201ENST00000416717 MLECQ14165 292 aa14.89□□□□□ -0.03
SMPD4P1-201ENST00000416717 MADDQ8WXG6 1647 aa14.86□□□□□ -0.03
SMPD4P1-201ENST00000416717 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
SMPD4P1-201ENST00000416717 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
SMPD4P1-201ENST00000416717 ZC3H13Q5T200 1668 aaKnown RBP14.85□□□□□ -0.03
SMPD4P1-201ENST00000416717 CNTLNQ9NXG0 1405 aa14.84□□□□□ -0.03
SMPD4P1-201ENST00000416717 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
SMPD4P1-201ENST00000416717 ADGRF5Q8IZF2 1346 aa14.82□□□□□ -0.04
SMPD4P1-201ENST00000416717 SYNMO15061 1565 aa14.82□□□□□ -0.04
SMPD4P1-201ENST00000416717 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
SMPD4P1-201ENST00000416717 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
SMPD4P1-201ENST00000416717 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
SMPD4P1-201ENST00000416717 CLTCQ00610 1675 aaKnown RBP14.81□□□□□ -0.04
SMPD4P1-201ENST00000416717 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
SMPD4P1-201ENST00000416717 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
SMPD4P1-201ENST00000416717 NOS1P29475 1434 aa14.8□□□□□ -0.04
SMPD4P1-201ENST00000416717 NUTM2DQ5VT03 806 aaPredicted RBP14.8□□□□□ -0.04
SMPD4P1-201ENST00000416717 LAMC1P11047 1609 aa14.8□□□□□ -0.04
SMPD4P1-201ENST00000416717 REREQ9P2R6 1566 aa14.79□□□□□ -0.04
SMPD4P1-201ENST00000416717 PREX1Q8TCU6 1659 aa14.79□□□□□ -0.04
SMPD4P1-201ENST00000416717 CFAP70Q5T0N1 1121 aa14.79□□□□□ -0.04
SMPD4P1-201ENST00000416717 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
SMPD4P1-201ENST00000416717 MYO5BQ9ULV0 1848 aa14.79□□□□□ -0.04
SMPD4P1-201ENST00000416717 ARID4BQ4LE39 1312 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms