RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 MIA2Q96PC5 1412 aa34.29■■■■□ 3.08
APTR-202ENST00000416650 PLA2R1Q13018 1463 aa34.28■■■■□ 3.08
APTR-202ENST00000416650 KIF3BO15066 747 aa34.28■■■■□ 3.08
APTR-202ENST00000416650 EIF2AK4Q9P2K8 1649 aaKnown RBP34.27■■■■□ 3.08
APTR-202ENST00000416650 LTBP4Q8N2S1 1624 aa34.26■■■■□ 3.08
APTR-202ENST00000416650 CROCC2H7BZ55 1655 aa34.26■■■■□ 3.08
APTR-202ENST00000416650 DNMT1P26358 1616 aaKnown RBP34.25■■■■□ 3.07
APTR-202ENST00000416650 ZC3H13Q5T200 1668 aaKnown RBP34.25■■■■□ 3.07
APTR-202ENST00000416650 TSPY4P0CV99 314 aa34.24■■■■□ 3.07
APTR-202ENST00000416650 TSPY10P0CW01 314 aa34.24■■■■□ 3.07
APTR-202ENST00000416650 PZPP20742 1482 aa34.24■■■■□ 3.07
APTR-202ENST00000416650 A2ML1A8K2U0 1454 aa34.22■■■■□ 3.07
APTR-202ENST00000416650 POLR1AO95602 1720 aaPredicted RBP34.22■■■■□ 3.07
APTR-202ENST00000416650 TCOF1Q13428 1488 aaKnown RBP34.21■■■■□ 3.07
APTR-202ENST00000416650 PTPN23Q9H3S7 1636 aa34.17■■■■□ 3.06
APTR-202ENST00000416650 MROH1Q8NDA8 1641 aa34.15■■■■□ 3.06
APTR-202ENST00000416650 CEP152O94986 1710 aa34.15■■■■□ 3.06
APTR-202ENST00000416650 TNRQ92752 1358 aa34.14■■■■□ 3.06
APTR-202ENST00000416650 NCKAP5LQ9HCH0 1330 aa34.14■■■■□ 3.06
APTR-202ENST00000416650 IQSEC2Q5JU85 1478 aa34.14■■■■□ 3.06
APTR-202ENST00000416650 WASHC2CQ9Y4E1 1318 aa34.13■■■■□ 3.05
APTR-202ENST00000416650 ABCC3O15438 1527 aa34.12■■■■□ 3.05
APTR-202ENST00000416650 PKD2Q13563 968 aa34.11■■■■□ 3.05
APTR-202ENST00000416650 DUOX2Q9NRD8 1548 aa34.1■■■■□ 3.05
APTR-202ENST00000416650 SHANK2Q9UPX8 1470 aa34.1■■■■□ 3.05
APTR-202ENST00000416650 FBXO31Q5XUX0 539 aaPredicted RBP34.09■■■■□ 3.05
APTR-202ENST00000416650 NEURL4Q96JN8 1562 aa34.06■■■■□ 3.04
APTR-202ENST00000416650 APLP2Q06481 763 aa34.06■■■■□ 3.04
APTR-202ENST00000416650 NLRP1Q9C000 1473 aa34.05■■■■□ 3.04
APTR-202ENST00000416650 CFAP65Q6ZU64 1925 aaKnown RBP34.04■■■■□ 3.04
APTR-202ENST00000416650 SPATA31D1Q6ZQQ2 1576 aa34.04■■■■□ 3.04
APTR-202ENST00000416650 FGD6Q6ZV73 1430 aa34.02■■■■□ 3.04
APTR-202ENST00000416650 PRDM15P57071 1507 aaPredicted RBP34.01■■■■□ 3.04
APTR-202ENST00000416650 ABCC5O15440 1437 aa34.01■■■■□ 3.03
APTR-202ENST00000416650 ZNF335Q9H4Z2 1342 aaPredicted RBP34.01■■■■□ 3.03
APTR-202ENST00000416650 UGGT1Q9NYU2 1555 aa34■■■■□ 3.03
APTR-202ENST00000416650 DEPDC5O75140 1603 aa33.98■■■■□ 3.03
APTR-202ENST00000416650 KIF15Q9NS87 1388 aa33.98■■■■□ 3.03
APTR-202ENST00000416650 DAPK1P53355 1430 aa33.97■■■■□ 3.03
APTR-202ENST00000416650 ERBINQ96RT1 1412 aa33.96■■■■□ 3.03
APTR-202ENST00000416650 ERVK-7P63135 1459 aa33.95■■■■□ 3.03
APTR-202ENST00000416650 UBR1Q8IWV7 1749 aa33.9■■■■□ 3.02
APTR-202ENST00000416650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.9■■■■□ 3.02
APTR-202ENST00000416650 IQGAP1P46940 1657 aa33.88■■■■□ 3.01
APTR-202ENST00000416650 THEMISQ8N1K5 641 aaPredicted RBP33.85■■■■□ 3.01
APTR-202ENST00000416650 MED14O60244 1454 aa33.84■■■■□ 3.01
APTR-202ENST00000416650 RRP7BPQ9NSQ0 103 aa33.83■■■■□ 3.01
APTR-202ENST00000416650 ARHGAP31Q2M1Z3 1444 aa33.82■■■■□ 3
APTR-202ENST00000416650 CPS1P31327 1500 aa33.82■■■■□ 3
APTR-202ENST00000416650 VWDEQ8N2E2 1590 aa33.81■■■■□ 3
APTR-202ENST00000416650 ANKLE2Q86XL3 938 aa33.81■■■■□ 3
APTR-202ENST00000416650 NPHP4O75161 1426 aaPredicted RBP33.79■■■■□ 3
APTR-202ENST00000416650 ANKRD30AQ9BXX3 1397 aa33.79■■■■□ 3
APTR-202ENST00000416650 ADGRL2O95490 1459 aa33.77■■■■□ 3
APTR-202ENST00000416650 LMTK2Q8IWU2 1503 aa33.74■■■□□ 2.99
APTR-202ENST00000416650 PIK3C2BO00750 1634 aa33.74■■■□□ 2.99
APTR-202ENST00000416650 STRCP1A6NGW2 1772 aa33.72■■■□□ 2.99
APTR-202ENST00000416650 CHIC2Q9UKJ5 165 aa33.72■■■□□ 2.99
APTR-202ENST00000416650 KANK1Q14678 1352 aa33.72■■■□□ 2.99
APTR-202ENST00000416650 UBAP1LF5GYI3 381 aa33.71■■■□□ 2.99
APTR-202ENST00000416650 KDM5AP29375 1690 aaKnown RBP33.7■■■□□ 2.99
APTR-202ENST00000416650 EFCAB6Q5THR3 1501 aa33.69■■■□□ 2.98
APTR-202ENST00000416650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.68■■■□□ 2.98
APTR-202ENST00000416650 SLIT1O75093 1534 aa33.68■■■□□ 2.98
APTR-202ENST00000416650 ARHGAP23Q9P227 1491 aa33.67■■■□□ 2.98
APTR-202ENST00000416650 SYNMO15061 1565 aa33.66■■■□□ 2.98
APTR-202ENST00000416650 SCAF11Q99590 1463 aaKnown RBP33.66■■■□□ 2.98
APTR-202ENST00000416650 FAM50AQ14320 339 aaKnown RBP33.62■■■□□ 2.97
APTR-202ENST00000416650 DISP3Q9P2K9 1392 aa33.61■■■□□ 2.97
APTR-202ENST00000416650 TET3O43151 1660 aa33.57■■■□□ 2.96
APTR-202ENST00000416650 ANKRD50Q9ULJ7 1429 aa33.56■■■□□ 2.96
APTR-202ENST00000416650 GCC2Q8IWJ2 1684 aa33.56■■■□□ 2.96
APTR-202ENST00000416650 UNC13BO14795 1591 aa33.55■■■□□ 2.96
APTR-202ENST00000416650 ALKQ9UM73 1620 aa33.53■■■□□ 2.96
APTR-202ENST00000416650 ADGRB3O60242 1522 aa33.53■■■□□ 2.96
APTR-202ENST00000416650 NOS1P29475 1434 aa33.53■■■□□ 2.96
APTR-202ENST00000416650 LRRC7Q96NW7 1537 aa33.51■■■□□ 2.95
APTR-202ENST00000416650 MYO5BQ9ULV0 1848 aa33.51■■■□□ 2.95
APTR-202ENST00000416650 XIRP1Q702N8 1843 aaKnown RBP33.5■■■□□ 2.95
APTR-202ENST00000416650 RPRD2Q5VT52 1461 aaKnown RBP33.5■■■□□ 2.95
APTR-202ENST00000416650 TMEM2Q9UHN6 1383 aa33.49■■■□□ 2.95
APTR-202ENST00000416650 LTKP29376 864 aa33.49■■■□□ 2.95
APTR-202ENST00000416650 TOM1O60784 492 aa33.48■■■□□ 2.95
APTR-202ENST00000416650 TXNDC2Q86VQ3 553 aa33.47■■■□□ 2.95
APTR-202ENST00000416650 SCAF1Q9H7N4 1312 aaKnown RBP33.45■■■□□ 2.95
APTR-202ENST00000416650 STAG3Q9UJ98 1225 aa33.44■■■□□ 2.94
APTR-202ENST00000416650 EID1Q9Y6B2 187 aa33.44■■■□□ 2.94
APTR-202ENST00000416650 PIP4K2BP78356 416 aa33.43■■■□□ 2.94
APTR-202ENST00000416650 IDI1Q13907 227 aa33.43■■■□□ 2.94
APTR-202ENST00000416650 IQGAP3Q86VI3 1631 aa33.41■■■□□ 2.94
APTR-202ENST00000416650 E9PCH4 1651 aa33.41■■■□□ 2.94
APTR-202ENST00000416650 ROCK1Q13464 1354 aa33.4■■■□□ 2.94
APTR-202ENST00000416650 ILDR2Q71H61 639 aa33.38■■■□□ 2.93
APTR-202ENST00000416650 HSPA1LP34931 641 aa33.35■■■□□ 2.93
APTR-202ENST00000416650 TMEM131LA2VDJ0 1609 aa33.35■■■□□ 2.93
APTR-202ENST00000416650 SLC52A1Q9NWF4 448 aa33.33■■■□□ 2.93
APTR-202ENST00000416650 MED1Q15648 1581 aaPredicted RBP33.3■■■□□ 2.92
APTR-202ENST00000416650 NWD1Q149M9 1564 aa33.3■■■□□ 2.92
APTR-202ENST00000416650 ZFYVE9O95405 1425 aa33.26■■■□□ 2.91
APTR-202ENST00000416650 CHD2O14647 1828 aaKnown RBP33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms