RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
LINC01398-201ENST00000416581 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
LINC01398-201ENST00000416581 TSPY4P0CV99 314 aa21.18■□□□□ 0.98
LINC01398-201ENST00000416581 TSPY10P0CW01 314 aa21.18■□□□□ 0.98
LINC01398-201ENST00000416581 A2ML1A8K2U0 1454 aa21.17■□□□□ 0.98
LINC01398-201ENST00000416581 TCOF1Q13428 1488 aaKnown RBP21.17■□□□□ 0.98
LINC01398-201ENST00000416581 PZPP20742 1482 aa21.16■□□□□ 0.98
LINC01398-201ENST00000416581 MAST1Q9Y2H9 1570 aa21.15■□□□□ 0.98
LINC01398-201ENST00000416581 KIF3BO15066 747 aa21.15■□□□□ 0.98
LINC01398-201ENST00000416581 MIA2Q96PC5 1412 aa21.14■□□□□ 0.98
LINC01398-201ENST00000416581 ZC3H13Q5T200 1668 aaKnown RBP21.13■□□□□ 0.97
LINC01398-201ENST00000416581 EIF2AK4Q9P2K8 1649 aaKnown RBP21.13■□□□□ 0.97
LINC01398-201ENST00000416581 TNRQ92752 1358 aa21.11■□□□□ 0.97
LINC01398-201ENST00000416581 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
LINC01398-201ENST00000416581 WASHC2CQ9Y4E1 1318 aa21.1■□□□□ 0.97
LINC01398-201ENST00000416581 POLR1AO95602 1720 aaPredicted RBP21.1■□□□□ 0.97
LINC01398-201ENST00000416581 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
LINC01398-201ENST00000416581 NLRP1Q9C000 1473 aa21.09■□□□□ 0.97
LINC01398-201ENST00000416581 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
LINC01398-201ENST00000416581 NCKAP5LQ9HCH0 1330 aa21.07■□□□□ 0.96
LINC01398-201ENST00000416581 SPATA31D1Q6ZQQ2 1576 aa21.04■□□□□ 0.96
LINC01398-201ENST00000416581 APLP2Q06481 763 aa21.03■□□□□ 0.96
LINC01398-201ENST00000416581 THEMISQ8N1K5 641 aaPredicted RBP21.02■□□□□ 0.96
LINC01398-201ENST00000416581 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
LINC01398-201ENST00000416581 ZNF335Q9H4Z2 1342 aaPredicted RBP21.02■□□□□ 0.95
LINC01398-201ENST00000416581 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
LINC01398-201ENST00000416581 CPS1P31327 1500 aa21.01■□□□□ 0.95
LINC01398-201ENST00000416581 UGGT1Q9NYU2 1555 aa21.01■□□□□ 0.95
LINC01398-201ENST00000416581 ABCC3O15438 1527 aa21■□□□□ 0.95
LINC01398-201ENST00000416581 DEPDC5O75140 1603 aa21■□□□□ 0.95
LINC01398-201ENST00000416581 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
LINC01398-201ENST00000416581 ANKLE2Q86XL3 938 aa20.98■□□□□ 0.95
LINC01398-201ENST00000416581 CROCC2H7BZ55 1655 aa20.98■□□□□ 0.95
LINC01398-201ENST00000416581 NEURL4Q96JN8 1562 aa20.97■□□□□ 0.95
LINC01398-201ENST00000416581 FBXO31Q5XUX0 539 aaPredicted RBP20.97■□□□□ 0.95
LINC01398-201ENST00000416581 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
LINC01398-201ENST00000416581 MED14O60244 1454 aa20.95■□□□□ 0.94
LINC01398-201ENST00000416581 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.94
LINC01398-201ENST00000416581 MROH1Q8NDA8 1641 aa20.94■□□□□ 0.94
LINC01398-201ENST00000416581 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
LINC01398-201ENST00000416581 ERVK-7P63135 1459 aa20.94■□□□□ 0.94
LINC01398-201ENST00000416581 PRDM15P57071 1507 aaPredicted RBP20.94■□□□□ 0.94
LINC01398-201ENST00000416581 UBAP1LF5GYI3 381 aa20.93■□□□□ 0.94
LINC01398-201ENST00000416581 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
LINC01398-201ENST00000416581 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
LINC01398-201ENST00000416581 CEP152O94986 1710 aa20.91■□□□□ 0.94
LINC01398-201ENST00000416581 KIF15Q9NS87 1388 aa20.91■□□□□ 0.94
LINC01398-201ENST00000416581 IQGAP1P46940 1657 aa20.9■□□□□ 0.94
LINC01398-201ENST00000416581 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
LINC01398-201ENST00000416581 ABCC5O15440 1437 aa20.87■□□□□ 0.93
LINC01398-201ENST00000416581 DAPK1P53355 1430 aa20.87■□□□□ 0.93
LINC01398-201ENST00000416581 FGD6Q6ZV73 1430 aa20.87■□□□□ 0.93
LINC01398-201ENST00000416581 KANK1Q14678 1352 aa20.87■□□□□ 0.93
LINC01398-201ENST00000416581 TOM1O60784 492 aa20.87■□□□□ 0.93
LINC01398-201ENST00000416581 SYNMO15061 1565 aa20.85■□□□□ 0.93
LINC01398-201ENST00000416581 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
LINC01398-201ENST00000416581 UBR1Q8IWV7 1749 aa20.85■□□□□ 0.93
LINC01398-201ENST00000416581 ANKRD30AQ9BXX3 1397 aa20.85■□□□□ 0.93
LINC01398-201ENST00000416581 KDM5AP29375 1690 aaKnown RBP20.82■□□□□ 0.92
LINC01398-201ENST00000416581 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
LINC01398-201ENST00000416581 SLIT1O75093 1534 aa20.8■□□□□ 0.92
LINC01398-201ENST00000416581 LMTK2Q8IWU2 1503 aa20.8■□□□□ 0.92
LINC01398-201ENST00000416581 ARHGAP23Q9P227 1491 aa20.78■□□□□ 0.92
LINC01398-201ENST00000416581 RRP7BPQ9NSQ0 103 aa20.78■□□□□ 0.92
LINC01398-201ENST00000416581 CFAP65Q6ZU64 1925 aaKnown RBP20.78■□□□□ 0.92
LINC01398-201ENST00000416581 ADGRL2O95490 1459 aa20.76■□□□□ 0.91
LINC01398-201ENST00000416581 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
LINC01398-201ENST00000416581 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
LINC01398-201ENST00000416581 PIK3C2BO00750 1634 aa20.73■□□□□ 0.91
LINC01398-201ENST00000416581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.91
LINC01398-201ENST00000416581 EFCAB6Q5THR3 1501 aa20.72■□□□□ 0.91
LINC01398-201ENST00000416581 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
LINC01398-201ENST00000416581 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
LINC01398-201ENST00000416581 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
LINC01398-201ENST00000416581 PIP4K2BP78356 416 aa20.7■□□□□ 0.9
LINC01398-201ENST00000416581 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
LINC01398-201ENST00000416581 TMEM2Q9UHN6 1383 aa20.7■□□□□ 0.9
LINC01398-201ENST00000416581 STRCP1A6NGW2 1772 aa20.68■□□□□ 0.9
LINC01398-201ENST00000416581 HSPA1LP34931 641 aa20.66■□□□□ 0.9
LINC01398-201ENST00000416581 CHIC2Q9UKJ5 165 aa20.66■□□□□ 0.9
LINC01398-201ENST00000416581 NOS1P29475 1434 aa20.66■□□□□ 0.9
LINC01398-201ENST00000416581 ANKRD50Q9ULJ7 1429 aa20.66■□□□□ 0.9
LINC01398-201ENST00000416581 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
LINC01398-201ENST00000416581 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
LINC01398-201ENST00000416581 MED1Q15648 1581 aaPredicted RBP20.64■□□□□ 0.9
LINC01398-201ENST00000416581 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
LINC01398-201ENST00000416581 TET3O43151 1660 aa20.64■□□□□ 0.89
LINC01398-201ENST00000416581 LTKP29376 864 aa20.63■□□□□ 0.89
LINC01398-201ENST00000416581 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
LINC01398-201ENST00000416581 GCC2Q8IWJ2 1684 aa20.61■□□□□ 0.89
LINC01398-201ENST00000416581 IDI1Q13907 227 aa20.6■□□□□ 0.89
LINC01398-201ENST00000416581 UNC13BO14795 1591 aa20.59■□□□□ 0.89
LINC01398-201ENST00000416581 HDGFP51858 240 aaKnown RBP20.59■□□□□ 0.89
LINC01398-201ENST00000416581 ROCK1Q13464 1354 aa20.58■□□□□ 0.88
LINC01398-201ENST00000416581 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
LINC01398-201ENST00000416581 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
LINC01398-201ENST00000416581 NWD1Q149M9 1564 aa20.55■□□□□ 0.88
LINC01398-201ENST00000416581 KCNA6P17658 529 aa20.54■□□□□ 0.88
LINC01398-201ENST00000416581 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
LINC01398-201ENST00000416581 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms