RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CAMSAP1Q5T5Y3 1602 aa23.86■■□□□ 1.41
UBXN4-203ENST00000416538 NCOA1Q15788 1441 aa23.85■■□□□ 1.41
UBXN4-203ENST00000416538 RSPH4AQ5TD94 716 aa23.85■■□□□ 1.41
UBXN4-203ENST00000416538 DNMT1P26358 1616 aaKnown RBP23.84■■□□□ 1.41
UBXN4-203ENST00000416538 CEP152O94986 1710 aa23.82■■□□□ 1.4
UBXN4-203ENST00000416538 KIF3BO15066 747 aa23.82■■□□□ 1.4
UBXN4-203ENST00000416538 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
UBXN4-203ENST00000416538 ZC3H13Q5T200 1668 aaKnown RBP23.81■■□□□ 1.4
UBXN4-203ENST00000416538 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
UBXN4-203ENST00000416538 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
UBXN4-203ENST00000416538 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
UBXN4-203ENST00000416538 PZPP20742 1482 aa23.8■■□□□ 1.4
UBXN4-203ENST00000416538 ABCC5O15440 1437 aa23.79■■□□□ 1.4
UBXN4-203ENST00000416538 ABCC3O15438 1527 aa23.79■■□□□ 1.4
UBXN4-203ENST00000416538 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
UBXN4-203ENST00000416538 TSPY4P0CV99 314 aa23.77■■□□□ 1.4
UBXN4-203ENST00000416538 TSPY10P0CW01 314 aa23.77■■□□□ 1.4
UBXN4-203ENST00000416538 PIAS4Q8N2W9 510 aaPredicted RBP23.77■■□□□ 1.4
UBXN4-203ENST00000416538 PTPRTO14522 1441 aa23.76■■□□□ 1.39
UBXN4-203ENST00000416538 DUOX2Q9NRD8 1548 aa23.76■■□□□ 1.39
UBXN4-203ENST00000416538 DAPK1P53355 1430 aa23.76■■□□□ 1.39
UBXN4-203ENST00000416538 MSH5O43196 834 aa23.75■■□□□ 1.39
UBXN4-203ENST00000416538 ADRA2BP18089 450 aa23.75■■□□□ 1.39
UBXN4-203ENST00000416538 A2ML1A8K2U0 1454 aa23.74■■□□□ 1.39
UBXN4-203ENST00000416538 PLA2R1Q13018 1463 aa23.74■■□□□ 1.39
UBXN4-203ENST00000416538 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
UBXN4-203ENST00000416538 DEPDC5O75140 1603 aa23.73■■□□□ 1.39
UBXN4-203ENST00000416538 LTBP4Q8N2S1 1624 aa23.73■■□□□ 1.39
UBXN4-203ENST00000416538 APLP2Q06481 763 aa23.72■■□□□ 1.39
UBXN4-203ENST00000416538 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
UBXN4-203ENST00000416538 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
UBXN4-203ENST00000416538 FBXO31Q5XUX0 539 aaPredicted RBP23.71■■□□□ 1.39
UBXN4-203ENST00000416538 TNRQ92752 1358 aa23.69■■□□□ 1.38
UBXN4-203ENST00000416538 KIF15Q9NS87 1388 aa23.69■■□□□ 1.38
UBXN4-203ENST00000416538 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
UBXN4-203ENST00000416538 SPATA31D1Q6ZQQ2 1576 aa23.69■■□□□ 1.38
UBXN4-203ENST00000416538 NEURL4Q96JN8 1562 aa23.69■■□□□ 1.38
UBXN4-203ENST00000416538 WASHC2CQ9Y4E1 1318 aa23.67■■□□□ 1.38
UBXN4-203ENST00000416538 DMRT2Q9Y5R5 561 aa23.66■■□□□ 1.38
UBXN4-203ENST00000416538 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
UBXN4-203ENST00000416538 NCKAP5LQ9HCH0 1330 aa23.65■■□□□ 1.38
UBXN4-203ENST00000416538 ERVK-7P63135 1459 aa23.64■■□□□ 1.38
UBXN4-203ENST00000416538 ADGRL2O95490 1459 aa23.61■■□□□ 1.37
UBXN4-203ENST00000416538 NLRP1Q9C000 1473 aa23.6■■□□□ 1.37
UBXN4-203ENST00000416538 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
UBXN4-203ENST00000416538 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
UBXN4-203ENST00000416538 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
UBXN4-203ENST00000416538 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
UBXN4-203ENST00000416538 PKD2Q13563 968 aa23.55■■□□□ 1.36
UBXN4-203ENST00000416538 CHIC2Q9UKJ5 165 aa23.55■■□□□ 1.36
UBXN4-203ENST00000416538 ANKRD30AQ9BXX3 1397 aa23.54■■□□□ 1.36
UBXN4-203ENST00000416538 ZNF335Q9H4Z2 1342 aaPredicted RBP23.54■■□□□ 1.36
UBXN4-203ENST00000416538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
UBXN4-203ENST00000416538 LMTK2Q8IWU2 1503 aa23.52■■□□□ 1.36
UBXN4-203ENST00000416538 ARHGAP31Q2M1Z3 1444 aa23.51■■□□□ 1.35
UBXN4-203ENST00000416538 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
UBXN4-203ENST00000416538 IQSEC2Q5JU85 1478 aa23.5■■□□□ 1.35
UBXN4-203ENST00000416538 PIK3C2BO00750 1634 aa23.5■■□□□ 1.35
UBXN4-203ENST00000416538 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
UBXN4-203ENST00000416538 FAM50AQ14320 339 aaKnown RBP23.49■■□□□ 1.35
UBXN4-203ENST00000416538 SYNMO15061 1565 aa23.48■■□□□ 1.35
UBXN4-203ENST00000416538 STRCP1A6NGW2 1772 aa23.47■■□□□ 1.35
UBXN4-203ENST00000416538 UNC13BO14795 1591 aa23.46■■□□□ 1.35
UBXN4-203ENST00000416538 MED14O60244 1454 aa23.46■■□□□ 1.35
UBXN4-203ENST00000416538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.342e-7■■■□□ 16.1
UBXN4-203ENST00000416538 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
UBXN4-203ENST00000416538 NPHP4O75161 1426 aaPredicted RBP23.42■■□□□ 1.34
UBXN4-203ENST00000416538 TET3O43151 1660 aa23.42■■□□□ 1.34
UBXN4-203ENST00000416538 KDM5AP29375 1690 aaKnown RBP23.41■■□□□ 1.34
UBXN4-203ENST00000416538 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
UBXN4-203ENST00000416538 ARHGAP23Q9P227 1491 aa23.41■■□□□ 1.34
UBXN4-203ENST00000416538 KANK1Q14678 1352 aa23.4■■□□□ 1.34
UBXN4-203ENST00000416538 SLIT1O75093 1534 aa23.4■■□□□ 1.34
UBXN4-203ENST00000416538 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
UBXN4-203ENST00000416538 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
UBXN4-203ENST00000416538 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
UBXN4-203ENST00000416538 NOS1P29475 1434 aa23.38■■□□□ 1.33
UBXN4-203ENST00000416538 ANKLE2Q86XL3 938 aa23.37■■□□□ 1.33
UBXN4-203ENST00000416538 E9PCH4 1651 aa23.36■■□□□ 1.33
UBXN4-203ENST00000416538 CPS1P31327 1500 aa23.36■■□□□ 1.33
UBXN4-203ENST00000416538 SCAF11Q99590 1463 aaKnown RBP23.36■■□□□ 1.33
UBXN4-203ENST00000416538 IQGAP3Q86VI3 1631 aa23.35■■□□□ 1.33
UBXN4-203ENST00000416538 ADGRB3O60242 1522 aa23.34■■□□□ 1.33
UBXN4-203ENST00000416538 ROCK1Q13464 1354 aa23.33■■□□□ 1.33
UBXN4-203ENST00000416538 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
UBXN4-203ENST00000416538 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
UBXN4-203ENST00000416538 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
UBXN4-203ENST00000416538 LTKP29376 864 aa23.29■■□□□ 1.32
UBXN4-203ENST00000416538 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.31
UBXN4-203ENST00000416538 RRBP1Q9P2E9 1410 aaKnown RBP23.26■■□□□ 1.31
UBXN4-203ENST00000416538 IDI1Q13907 227 aa23.25■■□□□ 1.31
UBXN4-203ENST00000416538 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
UBXN4-203ENST00000416538 LRRC7Q96NW7 1537 aa23.23■■□□□ 1.31
UBXN4-203ENST00000416538 ITGAEP38570 1179 aa23.23■■□□□ 1.31
UBXN4-203ENST00000416538 UBAP1LF5GYI3 381 aa23.22■■□□□ 1.31
UBXN4-203ENST00000416538 TXNDC2Q86VQ3 553 aa23.2■■□□□ 1.3
UBXN4-203ENST00000416538 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
UBXN4-203ENST00000416538 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
UBXN4-203ENST00000416538 NWD1Q149M9 1564 aa23.14■■□□□ 1.3
UBXN4-203ENST00000416538 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms