RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 COG3Q96JB2 828 aa19.92■□□□□ 0.78
PHRF1-203ENST00000416188 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
PHRF1-203ENST00000416188 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
PHRF1-203ENST00000416188 NOP58Q9Y2X3 529 aaKnown RBP19.9■□□□□ 0.78
PHRF1-203ENST00000416188 CALD1Q05682 793 aaKnown RBP19.9■□□□□ 0.78
PHRF1-203ENST00000416188 TAOK2Q9UL54 1235 aa19.9■□□□□ 0.78
PHRF1-203ENST00000416188 FGD6Q6ZV73 1430 aa19.89■□□□□ 0.77
PHRF1-203ENST00000416188 ANKRD50Q9ULJ7 1429 aa19.88■□□□□ 0.77
PHRF1-203ENST00000416188 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
PHRF1-203ENST00000416188 RTN4Q9NQC3 1192 aaKnown RBP19.87■□□□□ 0.77
PHRF1-203ENST00000416188 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
PHRF1-203ENST00000416188 NCOA2Q15596 1464 aa19.86■□□□□ 0.77
PHRF1-203ENST00000416188 MSH5O43196 834 aa19.86■□□□□ 0.77
PHRF1-203ENST00000416188 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
PHRF1-203ENST00000416188 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
PHRF1-203ENST00000416188 ST20-MTHFSA0A0A6YYL1 179 aa19.86■□□□□ 0.77
PHRF1-203ENST00000416188 CHMP4AQ9BY43 222 aa19.85■□□□□ 0.77
PHRF1-203ENST00000416188 ANKLE2Q86XL3 938 aa19.85■□□□□ 0.77
PHRF1-203ENST00000416188 FGD1P98174 961 aa19.85■□□□□ 0.77
PHRF1-203ENST00000416188 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
PHRF1-203ENST00000416188 KCNJ4P48050 445 aa19.84■□□□□ 0.77
PHRF1-203ENST00000416188 CD109Q6YHK3 1445 aa19.84■□□□□ 0.77
PHRF1-203ENST00000416188 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
PHRF1-203ENST00000416188 PLEKHH2Q8IVE3 1493 aa19.83■□□□□ 0.77
PHRF1-203ENST00000416188 PLCB2Q00722 1185 aa19.83■□□□□ 0.77
PHRF1-203ENST00000416188 DNTTIP2Q5QJE6 756 aaKnown RBP19.83■□□□□ 0.77
PHRF1-203ENST00000416188 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
PHRF1-203ENST00000416188 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
PHRF1-203ENST00000416188 GTF2E1P29083 439 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-203ENST00000416188 RALBP1Q15311 655 aa19.82■□□□□ 0.76
PHRF1-203ENST00000416188 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-203ENST00000416188 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
PHRF1-203ENST00000416188 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
PHRF1-203ENST00000416188 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
PHRF1-203ENST00000416188 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
PHRF1-203ENST00000416188 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
PHRF1-203ENST00000416188 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
PHRF1-203ENST00000416188 KIF21BO75037 1637 aa19.79■□□□□ 0.76
PHRF1-203ENST00000416188 ERICH6BQ5W0A0 696 aa19.79■□□□□ 0.76
PHRF1-203ENST00000416188 EFCAB5A4FU69 1503 aa19.79■□□□□ 0.76
PHRF1-203ENST00000416188 SYTL4Q96C24 671 aaPredicted RBP19.79■□□□□ 0.76
PHRF1-203ENST00000416188 NAP1L2Q9ULW6 460 aaPredicted RBP19.79■□□□□ 0.76
PHRF1-203ENST00000416188 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
PHRF1-203ENST00000416188 TMEM132EQ6IEE7 984 aa19.78■□□□□ 0.76
PHRF1-203ENST00000416188 CGNL1Q0VF96 1302 aa19.78■□□□□ 0.76
PHRF1-203ENST00000416188 ESCO1Q5FWF5 840 aa19.77■□□□□ 0.76
PHRF1-203ENST00000416188 TULP1O00294 542 aaPredicted RBP19.77■□□□□ 0.75
PHRF1-203ENST00000416188 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
PHRF1-203ENST00000416188 STAC3Q96MF2 364 aa19.76■□□□□ 0.75
PHRF1-203ENST00000416188 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
PHRF1-203ENST00000416188 LMOD3Q0VAK6 560 aa19.75■□□□□ 0.75
PHRF1-203ENST00000416188 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
PHRF1-203ENST00000416188 G3V3G9 751 aa19.74■□□□□ 0.75
PHRF1-203ENST00000416188 DCAF8Q5TAQ9 597 aa19.74■□□□□ 0.75
PHRF1-203ENST00000416188 SPRYD3Q8NCJ5 442 aa19.74■□□□□ 0.75
PHRF1-203ENST00000416188 PANK3Q9H999 370 aa19.74■□□□□ 0.75
PHRF1-203ENST00000416188 APBB1O00213 710 aa19.74■□□□□ 0.75
PHRF1-203ENST00000416188 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
PHRF1-203ENST00000416188 SLC52A1Q9NWF4 448 aa19.73■□□□□ 0.75
PHRF1-203ENST00000416188 CHMP3Q9Y3E7 222 aa19.73■□□□□ 0.75
PHRF1-203ENST00000416188 IQGAP2Q13576 1575 aa19.73■□□□□ 0.75
PHRF1-203ENST00000416188 IPO8O15397 1037 aaKnown RBP19.73■□□□□ 0.75
PHRF1-203ENST00000416188 SLC26A8Q96RN1 970 aa19.73■□□□□ 0.75
PHRF1-203ENST00000416188 ARAP1Q96P48 1450 aa19.72■□□□□ 0.75
PHRF1-203ENST00000416188 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
PHRF1-203ENST00000416188 TAF7LQ5H9L4 462 aa19.72■□□□□ 0.75
PHRF1-203ENST00000416188 GPRASP1Q5JY77 1395 aa19.72■□□□□ 0.75
PHRF1-203ENST00000416188 C9orf84Q5VXU9 1444 aa19.71■□□□□ 0.75
PHRF1-203ENST00000416188 TSHZ2Q9NRE2 1034 aa19.71■□□□□ 0.75
PHRF1-203ENST00000416188 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-203ENST00000416188 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-203ENST00000416188 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-203ENST00000416188 TEFQ10587 303 aa19.71■□□□□ 0.75
PHRF1-203ENST00000416188 DEKP35659 375 aaKnown RBP19.7■□□□□ 0.74
PHRF1-203ENST00000416188 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
PHRF1-203ENST00000416188 NLRP6P59044 892 aa19.69■□□□□ 0.74
PHRF1-203ENST00000416188 NLRP2Q9NX02 1062 aa19.69■□□□□ 0.74
PHRF1-203ENST00000416188 ISY1Q9ULR0 285 aaKnown RBP19.69■□□□□ 0.74
PHRF1-203ENST00000416188 NAP1L5Q96NT1 182 aaPredicted RBP19.69■□□□□ 0.74
PHRF1-203ENST00000416188 TTC5Q8N0Z6 440 aa19.68■□□□□ 0.74
PHRF1-203ENST00000416188 CCDC146Q8IYE0 955 aa19.68■□□□□ 0.74
PHRF1-203ENST00000416188 GOLGA6L4A6NEF3 574 aa19.68■□□□□ 0.74
PHRF1-203ENST00000416188 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
PHRF1-203ENST00000416188 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
PHRF1-203ENST00000416188 USP35Q9P2H5 1018 aa19.67■□□□□ 0.74
PHRF1-203ENST00000416188 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
PHRF1-203ENST00000416188 CFAP70Q5T0N1 1121 aa19.65■□□□□ 0.74
PHRF1-203ENST00000416188 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
PHRF1-203ENST00000416188 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
PHRF1-203ENST00000416188 KLHL34Q8N239 644 aa19.65■□□□□ 0.74
PHRF1-203ENST00000416188 USP47Q96K76 1375 aa19.65■□□□□ 0.74
PHRF1-203ENST00000416188 MCCP23508 829 aa19.65■□□□□ 0.74
PHRF1-203ENST00000416188 EHBP1L1Q8N3D4 1523 aa19.64■□□□□ 0.73
PHRF1-203ENST00000416188 GORABQ5T7V8 394 aa19.64■□□□□ 0.73
PHRF1-203ENST00000416188 ITPRIPQ8IWB1 547 aa19.64■□□□□ 0.73
PHRF1-203ENST00000416188 ABTB2Q8N961 1025 aa19.64■□□□□ 0.73
PHRF1-203ENST00000416188 PMFBP1Q8TBY8 1022 aa19.63■□□□□ 0.73
PHRF1-203ENST00000416188 HDAC5Q9UQL6 1122 aa19.63■□□□□ 0.73
PHRF1-203ENST00000416188 SLC4A10Q6U841 1118 aa19.62■□□□□ 0.73
PHRF1-203ENST00000416188 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms