RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 ZNF454Q8N9F8 522 aa10.62□□□□□ -0.71
NCLP2-201ENST00000416078 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
NCLP2-201ENST00000416078 PHF14O94880 888 aa10.61□□□□□ -0.71
NCLP2-201ENST00000416078 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
NCLP2-201ENST00000416078 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
NCLP2-201ENST00000416078 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
NCLP2-201ENST00000416078 FBXW7Q969H0 707 aa10.57□□□□□ -0.72
NCLP2-201ENST00000416078 EPAS1Q99814 870 aa10.57□□□□□ -0.72
NCLP2-201ENST00000416078 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
NCLP2-201ENST00000416078 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
NCLP2-201ENST00000416078 ADAM33Q9BZ11 813 aa10.55□□□□□ -0.72
NCLP2-201ENST00000416078 DDX12PQ92771 950 aa10.52□□□□□ -0.73
NCLP2-201ENST00000416078 PTPREP23469 700 aa10.51□□□□□ -0.73
NCLP2-201ENST00000416078 PSEN2P49810 448 aa10.5□□□□□ -0.73
NCLP2-201ENST00000416078 PTPN5P54829 565 aa10.5□□□□□ -0.73
NCLP2-201ENST00000416078 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
NCLP2-201ENST00000416078 EN1Q05925 392 aaPredicted RBP10.49□□□□□ -0.73
NCLP2-201ENST00000416078 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
NCLP2-201ENST00000416078 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
NCLP2-201ENST00000416078 NBR1Q14596 966 aa10.49□□□□□ -0.73
NCLP2-201ENST00000416078 SLC4A5Q9BY07 1137 aa10.49□□□□□ -0.73
NCLP2-201ENST00000416078 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
NCLP2-201ENST00000416078 OSBPP22059 807 aa10.46□□□□□ -0.74
NCLP2-201ENST00000416078 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.74
NCLP2-201ENST00000416078 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
NCLP2-201ENST00000416078 C6orf132Q5T0Z8 1188 aa10.45□□□□□ -0.74
NCLP2-201ENST00000416078 ZBED2Q9BTP6 218 aa10.44□□□□□ -0.74
NCLP2-201ENST00000416078 MLLT3P42568 568 aaPredicted RBP10.43□□□□□ -0.74
NCLP2-201ENST00000416078 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
NCLP2-201ENST00000416078 LCE2BO14633 110 aa10.42□□□□□ -0.74
NCLP2-201ENST00000416078 SEMA3EO15041 775 aa10.42□□□□□ -0.74
NCLP2-201ENST00000416078 COL9A1P20849 921 aa10.42□□□□□ -0.74
NCLP2-201ENST00000416078 VPS9D1Q9Y2B5 631 aa10.42□□□□□ -0.74
NCLP2-201ENST00000416078 MAP3K7O43318 606 aa10.41□□□□□ -0.74
NCLP2-201ENST00000416078 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
NCLP2-201ENST00000416078 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
NCLP2-201ENST00000416078 ZNF787Q6DD87 383 aa10.39□□□□□ -0.75
NCLP2-201ENST00000416078 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
NCLP2-201ENST00000416078 CERKQ8TCT0 537 aa10.37□□□□□ -0.75
NCLP2-201ENST00000416078 BHMG1C9JSJ3 638 aaPredicted RBP10.36□□□□□ -0.75
NCLP2-201ENST00000416078 THSD4Q6ZMP0 1018 aa10.36□□□□□ -0.75
NCLP2-201ENST00000416078 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
NCLP2-201ENST00000416078 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
NCLP2-201ENST00000416078 GFRA3O60609 400 aa10.35□□□□□ -0.75
NCLP2-201ENST00000416078 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
NCLP2-201ENST00000416078 RABGEF1Q9UJ41 708 aa10.34□□□□□ -0.75
NCLP2-201ENST00000416078 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
NCLP2-201ENST00000416078 PROX2Q3B8N5 592 aa10.33□□□□□ -0.76
NCLP2-201ENST00000416078 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
NCLP2-201ENST00000416078 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
NCLP2-201ENST00000416078 LOC100996750A0A140TA64 210 aa10.31□□□□□ -0.76
NCLP2-201ENST00000416078 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
NCLP2-201ENST00000416078 KRTAP4-6Q9BYQ5 205 aa10.31□□□□□ -0.76
NCLP2-201ENST00000416078 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
NCLP2-201ENST00000416078 NBPF3Q9H094 633 aa10.3□□□□□ -0.76
NCLP2-201ENST00000416078 PRSS12P56730 875 aa10.3□□□□□ -0.76
NCLP2-201ENST00000416078 TTC13Q8NBP0 860 aa10.29□□□□□ -0.76
NCLP2-201ENST00000416078 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
NCLP2-201ENST00000416078 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
NCLP2-201ENST00000416078 CCDC180Q9P1Z9 1646 aa10.28□□□□□ -0.76
NCLP2-201ENST00000416078 PTGDRQ13258 359 aa10.28□□□□□ -0.76
NCLP2-201ENST00000416078 LAPTM4BQ86VI4 370 aa10.27□□□□□ -0.77
NCLP2-201ENST00000416078 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
NCLP2-201ENST00000416078 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
NCLP2-201ENST00000416078 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
NCLP2-201ENST00000416078 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
NCLP2-201ENST00000416078 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
NCLP2-201ENST00000416078 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
NCLP2-201ENST00000416078 GPR37O15354 613 aa10.23□□□□□ -0.77
NCLP2-201ENST00000416078 PACS2Q86VP3 889 aa10.23□□□□□ -0.77
NCLP2-201ENST00000416078 NUTM2FA1L443 756 aa10.22□□□□□ -0.77
NCLP2-201ENST00000416078 FCHSD2O94868 740 aa10.22□□□□□ -0.77
NCLP2-201ENST00000416078 PADI6Q6TGC4 694 aa10.22□□□□□ -0.77
NCLP2-201ENST00000416078 WNT2BQ93097 391 aa10.22□□□□□ -0.77
NCLP2-201ENST00000416078 NBPF26B4DH59 902 aa10.21□□□□□ -0.78
NCLP2-201ENST00000416078 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
NCLP2-201ENST00000416078 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
NCLP2-201ENST00000416078 HIC1Q14526 733 aa10.19□□□□□ -0.78
NCLP2-201ENST00000416078 C3orf80F5H4A9 247 aa10.18□□□□□ -0.78
NCLP2-201ENST00000416078 TATDN2Q93075 761 aa10.18□□□□□ -0.78
NCLP2-201ENST00000416078 SEPT9Q9UHD8 586 aaPredicted RBP10.18□□□□□ -0.78
NCLP2-201ENST00000416078 ZFRQ96KR1 1074 aaKnown RBP10.17□□□□□ -0.78
NCLP2-201ENST00000416078 GPIHBP1Q8IV16 184 aa10.16□□□□□ -0.78
NCLP2-201ENST00000416078 PNMA3Q9UL41 463 aa10.16□□□□□ -0.78
NCLP2-201ENST00000416078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
NCLP2-201ENST00000416078 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
NCLP2-201ENST00000416078 GNPATO15228 680 aa10.14□□□□□ -0.79
NCLP2-201ENST00000416078 NUDT18Q6ZVK8 323 aa10.14□□□□□ -0.79
NCLP2-201ENST00000416078 SMAPO00193 183 aa10.13□□□□□ -0.79
NCLP2-201ENST00000416078 EYA1Q99502 592 aa10.13□□□□□ -0.79
NCLP2-201ENST00000416078 ADGRG1Q9Y653 693 aa10.13□□□□□ -0.79
NCLP2-201ENST00000416078 SOWAHBA6NEL2 793 aa10.12□□□□□ -0.79
NCLP2-201ENST00000416078 KCNC4Q03721 635 aa10.1□□□□□ -0.79
NCLP2-201ENST00000416078 NYAP1Q6ZVC0 841 aa10.1□□□□□ -0.79
NCLP2-201ENST00000416078 LMOD2Q6P5Q4 547 aa10.1□□□□□ -0.79
NCLP2-201ENST00000416078 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
NCLP2-201ENST00000416078 FECHP22830 423 aa10.08□□□□□ -0.8
NCLP2-201ENST00000416078 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
NCLP2-201ENST00000416078 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
NCLP2-201ENST00000416078 BCAMP50895 628 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms