RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
SCN1B-202ENST00000415950 DRC7Q8IY82 874 aa16.28■□□□□ 0.2
SCN1B-202ENST00000415950 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
SCN1B-202ENST00000415950 CHAF1AQ13111 956 aaPredicted RBP16.28■□□□□ 0.2
SCN1B-202ENST00000415950 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
SCN1B-202ENST00000415950 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
SCN1B-202ENST00000415950 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
SCN1B-202ENST00000415950 CENPQQ7L2Z9 268 aaPredicted RBP16.28■□□□□ 0.2
SCN1B-202ENST00000415950 ELL2O00472 640 aaPredicted RBP16.27■□□□□ 0.2
SCN1B-202ENST00000415950 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
SCN1B-202ENST00000415950 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
SCN1B-202ENST00000415950 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.19
SCN1B-202ENST00000415950 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
SCN1B-202ENST00000415950 CNTLNQ9NXG0 1405 aa16.25■□□□□ 0.19
SCN1B-202ENST00000415950 NOL8Q76FK4 1167 aaKnown RBP16.24■□□□□ 0.19
SCN1B-202ENST00000415950 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
SCN1B-202ENST00000415950 ADAMTS8Q9UP79 889 aa16.24■□□□□ 0.19
SCN1B-202ENST00000415950 GGT6Q6P531 493 aa16.24■□□□□ 0.19
SCN1B-202ENST00000415950 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
SCN1B-202ENST00000415950 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
SCN1B-202ENST00000415950 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
SCN1B-202ENST00000415950 PANK1Q8TE04 598 aa16.23■□□□□ 0.19
SCN1B-202ENST00000415950 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
SCN1B-202ENST00000415950 NRDCO43847 1150 aa16.22■□□□□ 0.19
SCN1B-202ENST00000415950 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
SCN1B-202ENST00000415950 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
SCN1B-202ENST00000415950 PNISRQ8TF01 805 aaKnown RBP16.22■□□□□ 0.19
SCN1B-202ENST00000415950 UACAQ9BZF9 1416 aa16.21■□□□□ 0.19
SCN1B-202ENST00000415950 GBP4Q96PP9 640 aa16.21■□□□□ 0.19
SCN1B-202ENST00000415950 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
SCN1B-202ENST00000415950 BACH2Q9BYV9 841 aa16.21■□□□□ 0.19
SCN1B-202ENST00000415950 HSP90AA2PQ14568 343 aaPredicted RBP16.2■□□□□ 0.18
SCN1B-202ENST00000415950 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
SCN1B-202ENST00000415950 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
SCN1B-202ENST00000415950 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
SCN1B-202ENST00000415950 PMFBP1Q8TBY8 1022 aa16.18■□□□□ 0.18
SCN1B-202ENST00000415950 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
SCN1B-202ENST00000415950 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
SCN1B-202ENST00000415950 CFTRP13569 1480 aa16.17■□□□□ 0.18
SCN1B-202ENST00000415950 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
SCN1B-202ENST00000415950 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
SCN1B-202ENST00000415950 MCCP23508 829 aa16.16■□□□□ 0.18
SCN1B-202ENST00000415950 BCAR3O75815 825 aa16.15■□□□□ 0.18
SCN1B-202ENST00000415950 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
SCN1B-202ENST00000415950 C20orf194Q5TEA3 1177 aa16.13■□□□□ 0.17
SCN1B-202ENST00000415950 KIF3BO15066 747 aa16.13■□□□□ 0.17
SCN1B-202ENST00000415950 NESP48681 1621 aa16.13■□□□□ 0.17
SCN1B-202ENST00000415950 IPO8O15397 1037 aaKnown RBP16.13■□□□□ 0.17
SCN1B-202ENST00000415950 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
SCN1B-202ENST00000415950 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
SCN1B-202ENST00000415950 ANKRD45Q5TZF3 282 aa16.12■□□□□ 0.17
SCN1B-202ENST00000415950 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
SCN1B-202ENST00000415950 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
SCN1B-202ENST00000415950 MLECQ14165 292 aa16.1■□□□□ 0.17
SCN1B-202ENST00000415950 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
SCN1B-202ENST00000415950 E9PSI1 815 aa16.09■□□□□ 0.17
SCN1B-202ENST00000415950 MYOM3Q5VTT5 1437 aa16.08■□□□□ 0.16
SCN1B-202ENST00000415950 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
SCN1B-202ENST00000415950 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
SCN1B-202ENST00000415950 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
SCN1B-202ENST00000415950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCN1B-202ENST00000415950 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
SCN1B-202ENST00000415950 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
SCN1B-202ENST00000415950 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
SCN1B-202ENST00000415950 NPHP1O15259 732 aa16.06■□□□□ 0.16
SCN1B-202ENST00000415950 JPH4Q96JJ6 628 aa16.06■□□□□ 0.16
SCN1B-202ENST00000415950 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
SCN1B-202ENST00000415950 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
SCN1B-202ENST00000415950 GNL2Q13823 731 aaKnown RBP16.04■□□□□ 0.16
SCN1B-202ENST00000415950 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
SCN1B-202ENST00000415950 PRXQ9BXM0 1461 aa16.04■□□□□ 0.16
SCN1B-202ENST00000415950 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
SCN1B-202ENST00000415950 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
SCN1B-202ENST00000415950 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
SCN1B-202ENST00000415950 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
SCN1B-202ENST00000415950 CHMP5Q9NZZ3 219 aa16.01■□□□□ 0.15
SCN1B-202ENST00000415950 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
SCN1B-202ENST00000415950 BRD4O60885 1362 aaPredicted RBP16■□□□□ 0.15
SCN1B-202ENST00000415950 TNNT3P45378 269 aaPredicted RBP16■□□□□ 0.15
SCN1B-202ENST00000415950 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
SCN1B-202ENST00000415950 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
SCN1B-202ENST00000415950 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
SCN1B-202ENST00000415950 ISY1Q9ULR0 285 aaKnown RBP16■□□□□ 0.15
SCN1B-202ENST00000415950 TRAK2O60296 914 aa15.99■□□□□ 0.15
SCN1B-202ENST00000415950 DZIP1LQ8IYY4 767 aaKnown RBP15.99■□□□□ 0.15
SCN1B-202ENST00000415950 MPNDQ8N594 471 aa15.99■□□□□ 0.15
SCN1B-202ENST00000415950 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
SCN1B-202ENST00000415950 DDX11L8A8MPP1 907 aa15.99■□□□□ 0.15
SCN1B-202ENST00000415950 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
SCN1B-202ENST00000415950 PPP2R1AP30153 589 aa15.98■□□□□ 0.15
SCN1B-202ENST00000415950 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
SCN1B-202ENST00000415950 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
SCN1B-202ENST00000415950 TCP11L2Q8N4U5 519 aa15.97■□□□□ 0.15
SCN1B-202ENST00000415950 HDGFL2Q7Z4V5 671 aaPredicted RBP15.97■□□□□ 0.15
SCN1B-202ENST00000415950 PTMSP20962 102 aa15.96■□□□□ 0.15
SCN1B-202ENST00000415950 RNF214Q8ND24 703 aa15.96■□□□□ 0.14
SCN1B-202ENST00000415950 NAIPQ13075 1403 aa15.96■□□□□ 0.14
SCN1B-202ENST00000415950 FAM43AQ8N2R8 423 aa15.95■□□□□ 0.14
SCN1B-202ENST00000415950 KANK1Q14678 1352 aa15.95■□□□□ 0.14
SCN1B-202ENST00000415950 TMEM132EQ6IEE7 984 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms