RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
DDX56-202ENST00000415758 KIF3BO15066 747 aa24.74■■□□□ 1.55
DDX56-202ENST00000415758 CCDC141Q6ZP82 1450 aa24.74■■□□□ 1.55
DDX56-202ENST00000415758 PZPP20742 1482 aa24.71■■□□□ 1.55
DDX56-202ENST00000415758 NCOA2Q15596 1464 aa24.71■■□□□ 1.55
DDX56-202ENST00000415758 FBXO31Q5XUX0 539 aaPredicted RBP24.71■■□□□ 1.55
DDX56-202ENST00000415758 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
DDX56-202ENST00000415758 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.55
DDX56-202ENST00000415758 TNRQ92752 1358 aa24.7■■□□□ 1.55
DDX56-202ENST00000415758 WASHC2CQ9Y4E1 1318 aa24.67■■□□□ 1.54
DDX56-202ENST00000415758 NEURL4Q96JN8 1562 aa24.67■■□□□ 1.54
DDX56-202ENST00000415758 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
DDX56-202ENST00000415758 ARHGEF5Q12774 1597 aa24.66■■□□□ 1.54
DDX56-202ENST00000415758 MIA2Q96PC5 1412 aa24.64■■□□□ 1.54
DDX56-202ENST00000415758 CPS1P31327 1500 aa24.63■■□□□ 1.53
DDX56-202ENST00000415758 TSPY4P0CV99 314 aa24.63■■□□□ 1.53
DDX56-202ENST00000415758 TSPY10P0CW01 314 aa24.63■■□□□ 1.53
DDX56-202ENST00000415758 THEMISQ8N1K5 641 aaPredicted RBP24.63■■□□□ 1.53
DDX56-202ENST00000415758 ANKLE2Q86XL3 938 aa24.62■■□□□ 1.53
DDX56-202ENST00000415758 NLRP1Q9C000 1473 aa24.62■■□□□ 1.53
DDX56-202ENST00000415758 SHANK2Q9UPX8 1470 aa24.62■■□□□ 1.53
DDX56-202ENST00000415758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.53
DDX56-202ENST00000415758 MED14O60244 1454 aa24.58■■□□□ 1.53
DDX56-202ENST00000415758 TOM1O60784 492 aa24.58■■□□□ 1.53
DDX56-202ENST00000415758 UGGT1Q9NYU2 1555 aa24.58■■□□□ 1.52
DDX56-202ENST00000415758 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
DDX56-202ENST00000415758 VWDEQ8N2E2 1590 aa24.54■■□□□ 1.52
DDX56-202ENST00000415758 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
DDX56-202ENST00000415758 RNF17Q9BXT8 1623 aaKnown RBP24.54■■□□□ 1.52
DDX56-202ENST00000415758 LRRC9Q6ZRR7 1453 aa24.54■■□□□ 1.52
DDX56-202ENST00000415758 NPHP4O75161 1426 aaPredicted RBP24.52■■□□□ 1.52
DDX56-202ENST00000415758 HSPA1LP34931 641 aa24.52■■□□□ 1.52
DDX56-202ENST00000415758 ZC3H13Q5T200 1668 aaKnown RBP24.51■■□□□ 1.51
DDX56-202ENST00000415758 ABCC3O15438 1527 aa24.51■■□□□ 1.51
DDX56-202ENST00000415758 PIP4K2BP78356 416 aa24.5■■□□□ 1.51
DDX56-202ENST00000415758 VPS8Q8N3P4 1428 aa24.5■■□□□ 1.51
DDX56-202ENST00000415758 EIF2AK4Q9P2K8 1649 aaKnown RBP24.5■■□□□ 1.51
DDX56-202ENST00000415758 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
DDX56-202ENST00000415758 MAP3K1Q13233 1512 aa24.47■■□□□ 1.51
DDX56-202ENST00000415758 IQGAP1P46940 1657 aa24.46■■□□□ 1.51
DDX56-202ENST00000415758 ERVK-7P63135 1459 aa24.45■■□□□ 1.51
DDX56-202ENST00000415758 MROH1Q8NDA8 1641 aa24.45■■□□□ 1.5
DDX56-202ENST00000415758 ALKQ9UM73 1620 aa24.44■■□□□ 1.5
DDX56-202ENST00000415758 MED1Q15648 1581 aaPredicted RBP24.42■■□□□ 1.5
DDX56-202ENST00000415758 KANK4Q5T7N3 995 aaPredicted RBP24.42■■□□□ 1.5
DDX56-202ENST00000415758 MYOM3Q5VTT5 1437 aa24.42■■□□□ 1.5
DDX56-202ENST00000415758 STRCP1A6NGW2 1772 aa24.4■■□□□ 1.5
DDX56-202ENST00000415758 DUOX2Q9NRD8 1548 aa24.4■■□□□ 1.5
DDX56-202ENST00000415758 LRRC7Q96NW7 1537 aa24.39■■□□□ 1.49
DDX56-202ENST00000415758 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
DDX56-202ENST00000415758 CEP152O94986 1710 aa24.38■■□□□ 1.49
DDX56-202ENST00000415758 CFAP65Q6ZU64 1925 aaKnown RBP24.37■■□□□ 1.49
DDX56-202ENST00000415758 ARHGAP31Q2M1Z3 1444 aa24.36■■□□□ 1.49
DDX56-202ENST00000415758 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
DDX56-202ENST00000415758 SYNMO15061 1565 aa24.35■■□□□ 1.49
DDX56-202ENST00000415758 SCAF11Q99590 1463 aaKnown RBP24.33■■□□□ 1.49
DDX56-202ENST00000415758 ARHGAP23Q9P227 1491 aa24.33■■□□□ 1.49
DDX56-202ENST00000415758 SLIT1O75093 1534 aa24.33■■□□□ 1.49
DDX56-202ENST00000415758 PRDM15P57071 1507 aaPredicted RBP24.32■■□□□ 1.48
DDX56-202ENST00000415758 LTKP29376 864 aa24.31■■□□□ 1.48
DDX56-202ENST00000415758 ERBINQ96RT1 1412 aa24.31■■□□□ 1.48
DDX56-202ENST00000415758 KIF15Q9NS87 1388 aa24.3■■□□□ 1.48
DDX56-202ENST00000415758 ABCC5O15440 1437 aa24.3■■□□□ 1.48
DDX56-202ENST00000415758 TXNDC2Q86VQ3 553 aa24.29■■□□□ 1.48
DDX56-202ENST00000415758 CROCC2H7BZ55 1655 aa24.27■■□□□ 1.48
DDX56-202ENST00000415758 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
DDX56-202ENST00000415758 EID1Q9Y6B2 187 aa24.25■■□□□ 1.47
DDX56-202ENST00000415758 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
DDX56-202ENST00000415758 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
DDX56-202ENST00000415758 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
DDX56-202ENST00000415758 XIRP1Q702N8 1843 aaKnown RBP24.21■■□□□ 1.47
DDX56-202ENST00000415758 KDM5AP29375 1690 aaKnown RBP24.21■■□□□ 1.47
DDX56-202ENST00000415758 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
DDX56-202ENST00000415758 DAPK1P53355 1430 aa24.21■■□□□ 1.47
DDX56-202ENST00000415758 KANK1Q14678 1352 aa24.2■■□□□ 1.46
DDX56-202ENST00000415758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.2■■□□□ 1.462e-7■■□□□ 11.7
DDX56-202ENST00000415758 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.46
DDX56-202ENST00000415758 IDI1Q13907 227 aa24.17■■□□□ 1.46
DDX56-202ENST00000415758 FGD6Q6ZV73 1430 aa24.17■■□□□ 1.46
DDX56-202ENST00000415758 ANKRD30AQ9BXX3 1397 aa24.16■■□□□ 1.46
DDX56-202ENST00000415758 APLP2Q06481 763 aa24.15■■□□□ 1.46
DDX56-202ENST00000415758 STAG3Q9UJ98 1225 aa24.15■■□□□ 1.46
DDX56-202ENST00000415758 EFCAB6Q5THR3 1501 aa24.15■■□□□ 1.46
DDX56-202ENST00000415758 FAM135BQ49AJ0 1406 aa24.14■■□□□ 1.45
DDX56-202ENST00000415758 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
DDX56-202ENST00000415758 TET3O43151 1660 aa24.12■■□□□ 1.45
DDX56-202ENST00000415758 KCNA6P17658 529 aa24.12■■□□□ 1.45
DDX56-202ENST00000415758 NOS1P29475 1434 aa24.11■■□□□ 1.45
DDX56-202ENST00000415758 CHIC2Q9UKJ5 165 aa24.1■■□□□ 1.45
DDX56-202ENST00000415758 TMEM94Q12767 1356 aa24.09■■□□□ 1.45
DDX56-202ENST00000415758 RGS17Q9UGC6 210 aaPredicted RBP24.09■■□□□ 1.45
DDX56-202ENST00000415758 SLC52A1Q9NWF4 448 aa24.08■■□□□ 1.45
DDX56-202ENST00000415758 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
DDX56-202ENST00000415758 ADGRL2O95490 1459 aa24.06■■□□□ 1.44
DDX56-202ENST00000415758 ADGRB3O60242 1522 aa24.05■■□□□ 1.44
DDX56-202ENST00000415758 PROSER2Q86WR7 435 aaPredicted RBP24.04■■□□□ 1.44
DDX56-202ENST00000415758 RPRD2Q5VT52 1461 aaKnown RBP24.02■■□□□ 1.44
DDX56-202ENST00000415758 NKTRP30414 1462 aaKnown RBP24.01■■□□□ 1.43
DDX56-202ENST00000415758 NWD1Q149M9 1564 aa24.01■■□□□ 1.43
DDX56-202ENST00000415758 ROBO1Q9Y6N7 1651 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms