RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 NCOA3Q9Y6Q9 1424 aa11.03□□□□□ -0.64
LMBR1-204ENST00000415428 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.65
LMBR1-204ENST00000415428 A2MP01023 1474 aa11.02□□□□□ -0.65
LMBR1-204ENST00000415428 MAP3K1Q13233 1512 aa11.02□□□□□ -0.65
LMBR1-204ENST00000415428 DIP2AQ14689 1571 aa11.01□□□□□ -0.65
LMBR1-204ENST00000415428 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
LMBR1-204ENST00000415428 NKTRP30414 1462 aaKnown RBP10.99□□□□□ -0.65
LMBR1-204ENST00000415428 SYCP2Q9BX26 1530 aa10.99□□□□□ -0.65
LMBR1-204ENST00000415428 PRAG1Q86YV5 1406 aa10.98□□□□□ -0.65
LMBR1-204ENST00000415428 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
LMBR1-204ENST00000415428 LRP5O75197 1615 aa10.98□□□□□ -0.65
LMBR1-204ENST00000415428 EHBP1L1Q8N3D4 1523 aa10.98□□□□□ -0.65
LMBR1-204ENST00000415428 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
LMBR1-204ENST00000415428 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
LMBR1-204ENST00000415428 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
LMBR1-204ENST00000415428 EFCAB2Q5VUJ9 269 aa10.97□□□□□ -0.65
LMBR1-204ENST00000415428 CHD2O14647 1828 aaKnown RBP10.97□□□□□ -0.65
LMBR1-204ENST00000415428 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
LMBR1-204ENST00000415428 SPHKAPQ2M3C7 1700 aa10.96□□□□□ -0.66
LMBR1-204ENST00000415428 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
LMBR1-204ENST00000415428 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
LMBR1-204ENST00000415428 PLEKHD1A6NEE1 506 aa10.94□□□□□ -0.66
LMBR1-204ENST00000415428 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
LMBR1-204ENST00000415428 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
LMBR1-204ENST00000415428 COL22A1Q8NFW1 1626 aaPredicted RBP10.94□□□□□ -0.66
LMBR1-204ENST00000415428 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.93□□□□□ -0.66
LMBR1-204ENST00000415428 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
LMBR1-204ENST00000415428 ERVK-7P63135 1459 aa10.9□□□□□ -0.66
LMBR1-204ENST00000415428 CEP152O94986 1710 aa10.89□□□□□ -0.67
LMBR1-204ENST00000415428 ROBO1Q9Y6N7 1651 aa10.89□□□□□ -0.67
LMBR1-204ENST00000415428 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
LMBR1-204ENST00000415428 NPHP4O75161 1426 aaPredicted RBP10.89□□□□□ -0.67
LMBR1-204ENST00000415428 XRN1Q8IZH2 1706 aaKnown RBP10.86□□□□□ -0.67
LMBR1-204ENST00000415428 HSPA2P54652 639 aa10.86□□□□□ -0.67
LMBR1-204ENST00000415428 MARF1Q9Y4F3 1742 aaKnown RBP10.86□□□□□ -0.67
LMBR1-204ENST00000415428 GCC2Q8IWJ2 1684 aa10.86□□□□□ -0.67
LMBR1-204ENST00000415428 KCNH8Q96L42 1107 aa10.85□□□□□ -0.67
LMBR1-204ENST00000415428 PHLPP1O60346 1717 aa10.85□□□□□ -0.67
LMBR1-204ENST00000415428 ADGRB3O60242 1522 aa10.85□□□□□ -0.67
LMBR1-204ENST00000415428 CCDC141Q6ZP82 1450 aa10.84□□□□□ -0.67
LMBR1-204ENST00000415428 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.67
LMBR1-204ENST00000415428 MIA2Q96PC5 1412 aa10.83□□□□□ -0.68
LMBR1-204ENST00000415428 DUOX2Q9NRD8 1548 aa10.82□□□□□ -0.68
LMBR1-204ENST00000415428 RPRD2Q5VT52 1461 aaKnown RBP10.81□□□□□ -0.68
LMBR1-204ENST00000415428 TNRQ92752 1358 aa10.81□□□□□ -0.68
LMBR1-204ENST00000415428 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
LMBR1-204ENST00000415428 DCCP43146 1447 aa10.81□□□□□ -0.68
LMBR1-204ENST00000415428 ERBINQ96RT1 1412 aa10.8□□□□□ -0.68
LMBR1-204ENST00000415428 CDK11AQ9UQ88 783 aaPredicted RBP10.8□□□□□ -0.68
LMBR1-204ENST00000415428 UNC13BO14795 1591 aa10.79□□□□□ -0.68
LMBR1-204ENST00000415428 RSPH4AQ5TD94 716 aa10.78□□□□□ -0.68
LMBR1-204ENST00000415428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.684e-7■■■■□ 21.6
LMBR1-204ENST00000415428 RGS17Q9UGC6 210 aaPredicted RBP10.77□□□□□ -0.68
LMBR1-204ENST00000415428 TMEM131LA2VDJ0 1609 aa10.77□□□□□ -0.69
LMBR1-204ENST00000415428 NOS1P29475 1434 aa10.76□□□□□ -0.69
LMBR1-204ENST00000415428 ZNF335Q9H4Z2 1342 aaPredicted RBP10.75□□□□□ -0.69
LMBR1-204ENST00000415428 SETBP1Q9Y6X0 1596 aa10.75□□□□□ -0.69
LMBR1-204ENST00000415428 ARID4BQ4LE39 1312 aaPredicted RBP10.75□□□□□ -0.69
LMBR1-204ENST00000415428 ADGRL2O95490 1459 aa10.75□□□□□ -0.69
LMBR1-204ENST00000415428 PIK3R4Q99570 1358 aa10.74□□□□□ -0.69
LMBR1-204ENST00000415428 ZFYVE9O95405 1425 aa10.74□□□□□ -0.69
LMBR1-204ENST00000415428 NRXN3Q9Y4C0 1643 aa10.74□□□□□ -0.69
LMBR1-204ENST00000415428 TOM1O60784 492 aa10.73□□□□□ -0.69
LMBR1-204ENST00000415428 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.73□□□□□ -0.69
LMBR1-204ENST00000415428 RGPD3A6NKT7 1758 aaPredicted RBP10.7□□□□□ -0.7
LMBR1-204ENST00000415428 RGPD4Q7Z3J3 1758 aa10.7□□□□□ -0.7
LMBR1-204ENST00000415428 HSPA1LP34931 641 aa10.7□□□□□ -0.7
LMBR1-204ENST00000415428 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
LMBR1-204ENST00000415428 NCKAP5LQ9HCH0 1330 aa10.68□□□□□ -0.7
LMBR1-204ENST00000415428 AFAP1Q8N556 730 aa10.68□□□□□ -0.7
LMBR1-204ENST00000415428 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
LMBR1-204ENST00000415428 LRP6O75581 1613 aa10.67□□□□□ -0.7
LMBR1-204ENST00000415428 CEBPAP49715 358 aaPredicted RBP10.67□□□□□ -0.7
LMBR1-204ENST00000415428 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
LMBR1-204ENST00000415428 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.7
LMBR1-204ENST00000415428 SPATA31A6Q5VVP1 1343 aa10.65□□□□□ -0.7
LMBR1-204ENST00000415428 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.71
LMBR1-204ENST00000415428 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
LMBR1-204ENST00000415428 TRPM2O94759 1503 aa10.64□□□□□ -0.71
LMBR1-204ENST00000415428 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
LMBR1-204ENST00000415428 COL24A1Q17RW2 1714 aa10.63□□□□□ -0.71
LMBR1-204ENST00000415428 THEMISQ8N1K5 641 aaPredicted RBP10.62□□□□□ -0.71
LMBR1-204ENST00000415428 PLEKHG1Q9ULL1 1385 aa10.62□□□□□ -0.71
LMBR1-204ENST00000415428 ABCA3Q99758 1704 aa10.62□□□□□ -0.71
LMBR1-204ENST00000415428 JCADQ9P266 1359 aa10.61□□□□□ -0.71
LMBR1-204ENST00000415428 TMEM2Q9UHN6 1383 aa10.61□□□□□ -0.71
LMBR1-204ENST00000415428 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
LMBR1-204ENST00000415428 CRYBG1Q9Y4K1 1723 aa10.6□□□□□ -0.71
LMBR1-204ENST00000415428 NEXMIFQ5QGS0 1516 aa10.6□□□□□ -0.71
LMBR1-204ENST00000415428 ANKLE2Q86XL3 938 aa10.6□□□□□ -0.71
LMBR1-204ENST00000415428 RREB1Q92766 1687 aa10.59□□□□□ -0.71
LMBR1-204ENST00000415428 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
LMBR1-204ENST00000415428 MTUS2Q5JR59 1369 aa10.58□□□□□ -0.72
LMBR1-204ENST00000415428 PTCH1Q13635 1447 aa10.57□□□□□ -0.72
LMBR1-204ENST00000415428 E9PCH4 1651 aa10.57□□□□□ -0.72
LMBR1-204ENST00000415428 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
LMBR1-204ENST00000415428 RGPD1P0DJD0 1748 aa10.56□□□□□ -0.72
LMBR1-204ENST00000415428 IFT172Q9UG01 1749 aa10.56□□□□□ -0.72
LMBR1-204ENST00000415428 KIF1AQ12756 1690 aa10.56□□□□□ -0.72
LMBR1-204ENST00000415428 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms