RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 FBXO31Q5XUX0 539 aaPredicted RBP30.42■■■□□ 2.46
CPSF7-204ENST00000413232 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.46
CPSF7-204ENST00000413232 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
CPSF7-204ENST00000413232 MAST1Q9Y2H9 1570 aa30.38■■■□□ 2.45
CPSF7-204ENST00000413232 PLA2R1Q13018 1463 aa30.38■■■□□ 2.45
CPSF7-204ENST00000413232 DNMT1P26358 1616 aaKnown RBP30.36■■■□□ 2.45
CPSF7-204ENST00000413232 MIA2Q96PC5 1412 aa30.36■■■□□ 2.45
CPSF7-204ENST00000413232 TCOF1Q13428 1488 aaKnown RBP30.36■■■□□ 2.45
CPSF7-204ENST00000413232 WASHC2CQ9Y4E1 1318 aa30.35■■■□□ 2.45
CPSF7-204ENST00000413232 A2ML1A8K2U0 1454 aa30.35■■■□□ 2.45
CPSF7-204ENST00000413232 PZPP20742 1482 aa30.34■■■□□ 2.45
CPSF7-204ENST00000413232 FAM135AQ9P2D6 1515 aa30.33■■■□□ 2.45
CPSF7-204ENST00000413232 TNRQ92752 1358 aa30.31■■■□□ 2.44
CPSF7-204ENST00000413232 PKD2Q13563 968 aa30.31■■■□□ 2.44
CPSF7-204ENST00000413232 RNF17Q9BXT8 1623 aaKnown RBP30.31■■■□□ 2.44
CPSF7-204ENST00000413232 ZNF335Q9H4Z2 1342 aaPredicted RBP30.29■■■□□ 2.44
CPSF7-204ENST00000413232 CFAP65Q6ZU64 1925 aaKnown RBP30.26■■■□□ 2.43
CPSF7-204ENST00000413232 MROH1Q8NDA8 1641 aa30.25■■■□□ 2.43
CPSF7-204ENST00000413232 ABCC3O15438 1527 aa30.24■■■□□ 2.43
CPSF7-204ENST00000413232 EIF2AK4Q9P2K8 1649 aaKnown RBP30.24■■■□□ 2.43
CPSF7-204ENST00000413232 PTPN23Q9H3S7 1636 aa30.23■■■□□ 2.43
CPSF7-204ENST00000413232 POLR1AO95602 1720 aaPredicted RBP30.22■■■□□ 2.43
CPSF7-204ENST00000413232 CROCC2H7BZ55 1655 aa30.22■■■□□ 2.43
CPSF7-204ENST00000413232 ABCC5O15440 1437 aa30.22■■■□□ 2.43
CPSF7-204ENST00000413232 CEP152O94986 1710 aa30.21■■■□□ 2.43
CPSF7-204ENST00000413232 NEURL4Q96JN8 1562 aa30.2■■■□□ 2.43
CPSF7-204ENST00000413232 IQSEC2Q5JU85 1478 aa30.2■■■□□ 2.43
CPSF7-204ENST00000413232 APLP2Q06481 763 aa30.2■■■□□ 2.43
CPSF7-204ENST00000413232 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
CPSF7-204ENST00000413232 DUOX2Q9NRD8 1548 aa30.18■■■□□ 2.42
CPSF7-204ENST00000413232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.16■■■□□ 2.421e-11■■□□□ 12.1
CPSF7-204ENST00000413232 NLRP1Q9C000 1473 aa30.15■■■□□ 2.42
CPSF7-204ENST00000413232 SPATA31D1Q6ZQQ2 1576 aa30.14■■■□□ 2.42
CPSF7-204ENST00000413232 UGGT1Q9NYU2 1555 aa30.14■■■□□ 2.42
CPSF7-204ENST00000413232 FGD6Q6ZV73 1430 aa30.13■■■□□ 2.41
CPSF7-204ENST00000413232 SHANK2Q9UPX8 1470 aa30.13■■■□□ 2.41
CPSF7-204ENST00000413232 RRP7BPQ9NSQ0 103 aa30.13■■■□□ 2.41
CPSF7-204ENST00000413232 KIF15Q9NS87 1388 aa30.13■■■□□ 2.41
CPSF7-204ENST00000413232 DAPK1P53355 1430 aa30.12■■■□□ 2.41
CPSF7-204ENST00000413232 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
CPSF7-204ENST00000413232 THEMISQ8N1K5 641 aaPredicted RBP30.1■■■□□ 2.41
CPSF7-204ENST00000413232 ANKLE2Q86XL3 938 aa30.08■■■□□ 2.41
CPSF7-204ENST00000413232 PRDM15P57071 1507 aaPredicted RBP30.06■■■□□ 2.4
CPSF7-204ENST00000413232 ERBINQ96RT1 1412 aa30.05■■■□□ 2.4
CPSF7-204ENST00000413232 DEPDC5O75140 1603 aa30.04■■■□□ 2.4
CPSF7-204ENST00000413232 CHIC2Q9UKJ5 165 aa30.04■■■□□ 2.4
CPSF7-204ENST00000413232 MED14O60244 1454 aa30.02■■■□□ 2.4
CPSF7-204ENST00000413232 UBAP1LF5GYI3 381 aa30.02■■■□□ 2.4
CPSF7-204ENST00000413232 VWDEQ8N2E2 1590 aa30.01■■■□□ 2.39
CPSF7-204ENST00000413232 UBR1Q8IWV7 1749 aa30.01■■■□□ 2.39
CPSF7-204ENST00000413232 NPHP4O75161 1426 aaPredicted RBP30■■■□□ 2.39
CPSF7-204ENST00000413232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30■■■□□ 2.392e-8■■□□□ 11.7
CPSF7-204ENST00000413232 IQGAP1P46940 1657 aa29.98■■■□□ 2.39
CPSF7-204ENST00000413232 ARHGAP31Q2M1Z3 1444 aa29.97■■■□□ 2.39
CPSF7-204ENST00000413232 ANKRD30AQ9BXX3 1397 aa29.95■■■□□ 2.39
CPSF7-204ENST00000413232 CPS1P31327 1500 aa29.95■■■□□ 2.38
CPSF7-204ENST00000413232 STRCP1A6NGW2 1772 aa29.95■■■□□ 2.38
CPSF7-204ENST00000413232 DISP3Q9P2K9 1392 aa29.93■■■□□ 2.38
CPSF7-204ENST00000413232 FAM50AQ14320 339 aaKnown RBP29.89■■■□□ 2.38
CPSF7-204ENST00000413232 ADGRL2O95490 1459 aa29.88■■■□□ 2.37
CPSF7-204ENST00000413232 LTKP29376 864 aa29.88■■■□□ 2.37
CPSF7-204ENST00000413232 ILDR2Q71H61 639 aa29.88■■■□□ 2.37
CPSF7-204ENST00000413232 PIK3C2BO00750 1634 aa29.88■■■□□ 2.37
CPSF7-204ENST00000413232 KANK1Q14678 1352 aa29.87■■■□□ 2.37
CPSF7-204ENST00000413232 ARHGAP23Q9P227 1491 aa29.87■■■□□ 2.37
CPSF7-204ENST00000413232 LMTK2Q8IWU2 1503 aa29.86■■■□□ 2.37
CPSF7-204ENST00000413232 SLIT1O75093 1534 aa29.85■■■□□ 2.37
CPSF7-204ENST00000413232 SCAF11Q99590 1463 aaKnown RBP29.84■■■□□ 2.37
CPSF7-204ENST00000413232 ALKQ9UM73 1620 aa29.82■■■□□ 2.36
CPSF7-204ENST00000413232 SYNMO15061 1565 aa29.81■■■□□ 2.36
CPSF7-204ENST00000413232 PIP4K2BP78356 416 aa29.81■■■□□ 2.36
CPSF7-204ENST00000413232 TXNDC2Q86VQ3 553 aa29.81■■■□□ 2.36
CPSF7-204ENST00000413232 IDI1Q13907 227 aa29.8■■■□□ 2.36
CPSF7-204ENST00000413232 EFCAB6Q5THR3 1501 aa29.78■■■□□ 2.36
CPSF7-204ENST00000413232 TOM1O60784 492 aa29.78■■■□□ 2.36
CPSF7-204ENST00000413232 SCAF1Q9H7N4 1312 aaKnown RBP29.77■■■□□ 2.36
CPSF7-204ENST00000413232 LRRC7Q96NW7 1537 aa29.77■■■□□ 2.36
CPSF7-204ENST00000413232 ANKRD50Q9ULJ7 1429 aa29.77■■■□□ 2.36
CPSF7-204ENST00000413232 NOS1P29475 1434 aa29.76■■■□□ 2.35
CPSF7-204ENST00000413232 HSPA1LP34931 641 aa29.75■■■□□ 2.35
CPSF7-204ENST00000413232 TMEM2Q9UHN6 1383 aa29.75■■■□□ 2.35
CPSF7-204ENST00000413232 KDM5AP29375 1690 aaKnown RBP29.74■■■□□ 2.35
CPSF7-204ENST00000413232 STAG3Q9UJ98 1225 aa29.71■■■□□ 2.35
CPSF7-204ENST00000413232 EID1Q9Y6B2 187 aa29.71■■■□□ 2.35
CPSF7-204ENST00000413232 XIRP1Q702N8 1843 aaKnown RBP29.71■■■□□ 2.35
CPSF7-204ENST00000413232 PPARGC1BQ86YN6 1023 aaKnown RBP29.68■■■□□ 2.34
CPSF7-204ENST00000413232 MYO5BQ9ULV0 1848 aa29.68■■■□□ 2.34
CPSF7-204ENST00000413232 TET3O43151 1660 aa29.66■■■□□ 2.34
CPSF7-204ENST00000413232 ADGRB3O60242 1522 aa29.65■■■□□ 2.34
CPSF7-204ENST00000413232 UNC13BO14795 1591 aa29.64■■■□□ 2.33
CPSF7-204ENST00000413232 RPRD2Q5VT52 1461 aaKnown RBP29.62■■■□□ 2.33
CPSF7-204ENST00000413232 SLC52A1Q9NWF4 448 aa29.62■■■□□ 2.33
CPSF7-204ENST00000413232 GCC2Q8IWJ2 1684 aa29.62■■■□□ 2.33
CPSF7-204ENST00000413232 SLC26A8Q96RN1 970 aa29.59■■■□□ 2.33
CPSF7-204ENST00000413232 ROCK1Q13464 1354 aa29.59■■■□□ 2.33
CPSF7-204ENST00000413232 E9PCH4 1651 aa29.58■■■□□ 2.33
CPSF7-204ENST00000413232 SOCS7O14512 581 aa29.56■■■□□ 2.32
CPSF7-204ENST00000413232 ITGAEP38570 1179 aa29.56■■■□□ 2.32
CPSF7-204ENST00000413232 SENP3Q9H4L4 574 aaPredicted RBP29.55■■■□□ 2.32
CPSF7-204ENST00000413232 TMEM131LA2VDJ0 1609 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms