RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 EP400Q96L91 3159 aa12.8□□□□□ -0.36
CPSF7-203ENST00000413184 QTRT2Q9H974 415 aaKnown RBP12.8□□□□□ -0.36
CPSF7-203ENST00000413184 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
CPSF7-203ENST00000413184 DEPDC5O75140 1603 aa12.8□□□□□ -0.36
CPSF7-203ENST00000413184 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
CPSF7-203ENST00000413184 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
CPSF7-203ENST00000413184 PLCH2O75038 1416 aa12.79□□□□□ -0.36
CPSF7-203ENST00000413184 ABCC1P33527 1531 aa12.78□□□□□ -0.36
CPSF7-203ENST00000413184 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
CPSF7-203ENST00000413184 HRCP23327 699 aa12.78□□□□□ -0.36
CPSF7-203ENST00000413184 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
CPSF7-203ENST00000413184 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
CPSF7-203ENST00000413184 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-203ENST00000413184 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.37
CPSF7-203ENST00000413184 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-203ENST00000413184 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
CPSF7-203ENST00000413184 COL16A1Q07092 1604 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-203ENST00000413184 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
CPSF7-203ENST00000413184 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
CPSF7-203ENST00000413184 THEMISQ8N1K5 641 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-203ENST00000413184 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
CPSF7-203ENST00000413184 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
CPSF7-203ENST00000413184 MLH3Q9UHC1 1453 aa12.74□□□□□ -0.37
CPSF7-203ENST00000413184 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
CPSF7-203ENST00000413184 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
CPSF7-203ENST00000413184 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.38
CPSF7-203ENST00000413184 FAM135AQ9P2D6 1515 aa12.7□□□□□ -0.38
CPSF7-203ENST00000413184 DEFB132Q7Z7B7 95 aa12.69□□□□□ -0.38
CPSF7-203ENST00000413184 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
CPSF7-203ENST00000413184 TNRQ92752 1358 aa12.69□□□□□ -0.38
CPSF7-203ENST00000413184 MYO5CQ9NQX4 1742 aa12.68□□□□□ -0.38
CPSF7-203ENST00000413184 CAPN15O75808 1086 aa12.68□□□□□ -0.38
CPSF7-203ENST00000413184 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
CPSF7-203ENST00000413184 SLAIN2Q9P270 581 aa12.67□□□□□ -0.38
CPSF7-203ENST00000413184 UGGT1Q9NYU2 1555 aa12.67□□□□□ -0.38
CPSF7-203ENST00000413184 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
CPSF7-203ENST00000413184 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
CPSF7-203ENST00000413184 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.38
CPSF7-203ENST00000413184 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
CPSF7-203ENST00000413184 GGT6Q6P531 493 aa12.65□□□□□ -0.38
CPSF7-203ENST00000413184 KIF14Q15058 1648 aa12.64□□□□□ -0.39
CPSF7-203ENST00000413184 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
CPSF7-203ENST00000413184 ATP7AQ04656 1500 aa12.63□□□□□ -0.39
CPSF7-203ENST00000413184 ARHGAP5Q13017 1502 aa12.62□□□□□ -0.39
CPSF7-203ENST00000413184 FBXO31Q5XUX0 539 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-203ENST00000413184 MAP3K1Q13233 1512 aa12.61□□□□□ -0.39
CPSF7-203ENST00000413184 MSH6P52701 1360 aa12.6□□□□□ -0.39
CPSF7-203ENST00000413184 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-203ENST00000413184 NLRP1Q9C000 1473 aa12.58□□□□□ -0.4
CPSF7-203ENST00000413184 TRPC5Q9UL62 973 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-203ENST00000413184 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-203ENST00000413184 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
CPSF7-203ENST00000413184 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-203ENST00000413184 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
CPSF7-203ENST00000413184 TIAM1Q13009 1591 aa12.55□□□□□ -0.4
CPSF7-203ENST00000413184 USP21Q9UK80 565 aa12.53□□□□□ -0.4
CPSF7-203ENST00000413184 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
CPSF7-203ENST00000413184 SCAF11Q99590 1463 aaKnown RBP12.53□□□□□ -0.4
CPSF7-203ENST00000413184 DIP2AQ14689 1571 aa12.52□□□□□ -0.4
CPSF7-203ENST00000413184 PRELPP51888 382 aa12.51□□□□□ -0.41
CPSF7-203ENST00000413184 PZPP20742 1482 aa12.51□□□□□ -0.41
CPSF7-203ENST00000413184 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-203ENST00000413184 ABCC3O15438 1527 aa12.5□□□□□ -0.41
CPSF7-203ENST00000413184 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-203ENST00000413184 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
CPSF7-203ENST00000413184 PLXNC1O60486 1568 aa12.49□□□□□ -0.41
CPSF7-203ENST00000413184 RTEL1-TNFRSF6BF6WH68 1400 aa12.49□□□□□ -0.41
CPSF7-203ENST00000413184 KCNA6P17658 529 aa12.49□□□□□ -0.41
CPSF7-203ENST00000413184 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
CPSF7-203ENST00000413184 SAMD9Q5K651 1589 aa12.47□□□□□ -0.41
CPSF7-203ENST00000413184 A2MP01023 1474 aa12.47□□□□□ -0.41
CPSF7-203ENST00000413184 UTRNP46939 3433 aa12.47□□□□□ -0.41
CPSF7-203ENST00000413184 BAG6P46379 1132 aa12.47□□□□□ -0.41
CPSF7-203ENST00000413184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.412e-8■■□□□ 13
CPSF7-203ENST00000413184 KDM5AP29375 1690 aaKnown RBP12.46□□□□□ -0.41
CPSF7-203ENST00000413184 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.41
CPSF7-203ENST00000413184 ATRNO75882 1429 aa12.45□□□□□ -0.42
CPSF7-203ENST00000413184 NINLQ9Y2I6 1382 aa12.45□□□□□ -0.42
CPSF7-203ENST00000413184 UNC13BO14795 1591 aa12.44□□□□□ -0.42
CPSF7-203ENST00000413184 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
CPSF7-203ENST00000413184 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
CPSF7-203ENST00000413184 LTKP29376 864 aa12.44□□□□□ -0.42
CPSF7-203ENST00000413184 CHD4Q14839 1912 aa12.44□□□□□ -0.42
CPSF7-203ENST00000413184 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
CPSF7-203ENST00000413184 NKTRP30414 1462 aaKnown RBP12.43□□□□□ -0.42
CPSF7-203ENST00000413184 CHIC1Q5VXU3 224 aa12.43□□□□□ -0.42
CPSF7-203ENST00000413184 SETD5Q9C0A6 1442 aa12.41□□□□□ -0.42
CPSF7-203ENST00000413184 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
CPSF7-203ENST00000413184 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
CPSF7-203ENST00000413184 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
CPSF7-203ENST00000413184 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-203ENST00000413184 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
CPSF7-203ENST00000413184 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
CPSF7-203ENST00000413184 UBR1Q8IWV7 1749 aa12.37□□□□□ -0.43
CPSF7-203ENST00000413184 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-203ENST00000413184 FNBP4Q8N3X1 1017 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-203ENST00000413184 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
CPSF7-203ENST00000413184 ARHGAP23Q9P227 1491 aa12.37□□□□□ -0.43
CPSF7-203ENST00000413184 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
CPSF7-203ENST00000413184 BRINP3Q76B58 766 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms