RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
VSIG4-202ENST00000412866 DHX29Q7Z478 1369 aaKnown RBP14.03□□□□□ -0.16
VSIG4-202ENST00000412866 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
VSIG4-202ENST00000412866 KIF13AQ9H1H9 1805 aa14.02□□□□□ -0.16
VSIG4-202ENST00000412866 A2MP01023 1474 aa14.01□□□□□ -0.17
VSIG4-202ENST00000412866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
VSIG4-202ENST00000412866 FRMPD1Q5SYB0 1578 aa14□□□□□ -0.17
VSIG4-202ENST00000412866 TSPOAP1O95153 1857 aa14□□□□□ -0.17
VSIG4-202ENST00000412866 ABCA6Q8N139 1617 aa14□□□□□ -0.17
VSIG4-202ENST00000412866 RAPGEF3O95398 923 aa13.99□□□□□ -0.17
VSIG4-202ENST00000412866 PRDM15P57071 1507 aaPredicted RBP13.98□□□□□ -0.17
VSIG4-202ENST00000412866 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
VSIG4-202ENST00000412866 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
VSIG4-202ENST00000412866 PPP1R15AO75807 674 aaPredicted RBP13.98□□□□□ -0.17
VSIG4-202ENST00000412866 DIP2CQ9Y2E4 1556 aa13.97□□□□□ -0.17
VSIG4-202ENST00000412866 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
VSIG4-202ENST00000412866 MROH1Q8NDA8 1641 aa13.96□□□□□ -0.17
VSIG4-202ENST00000412866 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
VSIG4-202ENST00000412866 KANK1Q14678 1352 aa13.96□□□□□ -0.17
VSIG4-202ENST00000412866 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
VSIG4-202ENST00000412866 KIF3BO15066 747 aa13.95□□□□□ -0.18
VSIG4-202ENST00000412866 TET3O43151 1660 aa13.94□□□□□ -0.18
VSIG4-202ENST00000412866 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
VSIG4-202ENST00000412866 YEATS2Q9ULM3 1422 aa13.92□□□□□ -0.18
VSIG4-202ENST00000412866 ATP10AO60312 1499 aa13.92□□□□□ -0.18
VSIG4-202ENST00000412866 PLA2R1Q13018 1463 aa13.91□□□□□ -0.18
VSIG4-202ENST00000412866 E9PCH4 1651 aa13.91□□□□□ -0.18
VSIG4-202ENST00000412866 CCDC144AA2RUR9 1427 aa13.91□□□□□ -0.18
VSIG4-202ENST00000412866 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.18
VSIG4-202ENST00000412866 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
VSIG4-202ENST00000412866 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
VSIG4-202ENST00000412866 TRPM2O94759 1503 aa13.88□□□□□ -0.19
VSIG4-202ENST00000412866 CEP152O94986 1710 aa13.86□□□□□ -0.19
VSIG4-202ENST00000412866 SPHKAPQ2M3C7 1700 aa13.86□□□□□ -0.19
VSIG4-202ENST00000412866 ARHGEF40Q8TER5 1519 aa13.86□□□□□ -0.19
VSIG4-202ENST00000412866 COL17A1Q9UMD9 1497 aaPredicted RBP13.86□□□□□ -0.19
VSIG4-202ENST00000412866 PTPRTO14522 1441 aa13.86□□□□□ -0.19
VSIG4-202ENST00000412866 ABCC3O15438 1527 aa13.85□□□□□ -0.19
VSIG4-202ENST00000412866 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
VSIG4-202ENST00000412866 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.2
VSIG4-202ENST00000412866 GGT6Q6P531 493 aa13.83□□□□□ -0.2
VSIG4-202ENST00000412866 AGLP35573 1532 aa13.83□□□□□ -0.2
VSIG4-202ENST00000412866 UHRF1BP1Q6BDS2 1440 aa13.82□□□□□ -0.2
VSIG4-202ENST00000412866 CAMSAP1Q5T5Y3 1602 aa13.82□□□□□ -0.2
VSIG4-202ENST00000412866 CLTCL1P53675 1640 aa13.81□□□□□ -0.2
VSIG4-202ENST00000412866 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
VSIG4-202ENST00000412866 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
VSIG4-202ENST00000412866 NPATQ14207 1427 aa13.8□□□□□ -0.2
VSIG4-202ENST00000412866 SPATA31E1Q6ZUB1 1445 aa13.79□□□□□ -0.2
VSIG4-202ENST00000412866 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
VSIG4-202ENST00000412866 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
VSIG4-202ENST00000412866 NEURL4Q96JN8 1562 aa13.77□□□□□ -0.2
VSIG4-202ENST00000412866 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
VSIG4-202ENST00000412866 ARHGAP31Q2M1Z3 1444 aa13.77□□□□□ -0.21
VSIG4-202ENST00000412866 ZNF326Q5BKZ1 582 aaKnown RBP13.76□□□□□ -0.21
VSIG4-202ENST00000412866 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
VSIG4-202ENST00000412866 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
VSIG4-202ENST00000412866 RGL3Q3MIN7 710 aa13.75□□□□□ -0.21
VSIG4-202ENST00000412866 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
VSIG4-202ENST00000412866 UGGT1Q9NYU2 1555 aa13.75□□□□□ -0.21
VSIG4-202ENST00000412866 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
VSIG4-202ENST00000412866 NOS1P29475 1434 aa13.74□□□□□ -0.21
VSIG4-202ENST00000412866 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
VSIG4-202ENST00000412866 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
VSIG4-202ENST00000412866 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
VSIG4-202ENST00000412866 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
VSIG4-202ENST00000412866 KIF1BO60333 1816 aa13.71□□□□□ -0.21
VSIG4-202ENST00000412866 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
VSIG4-202ENST00000412866 SYNMO15061 1565 aa13.71□□□□□ -0.21
VSIG4-202ENST00000412866 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
VSIG4-202ENST00000412866 PIK3C2BO00750 1634 aa13.7□□□□□ -0.22
VSIG4-202ENST00000412866 MADDQ8WXG6 1647 aa13.69□□□□□ -0.22
VSIG4-202ENST00000412866 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
VSIG4-202ENST00000412866 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
VSIG4-202ENST00000412866 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
VSIG4-202ENST00000412866 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
VSIG4-202ENST00000412866 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
VSIG4-202ENST00000412866 USP47Q96K76 1375 aa13.68□□□□□ -0.22
VSIG4-202ENST00000412866 MYOM2P54296 1465 aa13.67□□□□□ -0.22
VSIG4-202ENST00000412866 LAMC1P11047 1609 aa13.67□□□□□ -0.22
VSIG4-202ENST00000412866 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
VSIG4-202ENST00000412866 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
VSIG4-202ENST00000412866 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
VSIG4-202ENST00000412866 IFT172Q9UG01 1749 aa13.66□□□□□ -0.22
VSIG4-202ENST00000412866 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
VSIG4-202ENST00000412866 MLECQ14165 292 aa13.66□□□□□ -0.22
VSIG4-202ENST00000412866 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
VSIG4-202ENST00000412866 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
VSIG4-202ENST00000412866 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
VSIG4-202ENST00000412866 SPATA31D1Q6ZQQ2 1576 aa13.63□□□□□ -0.23
VSIG4-202ENST00000412866 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
VSIG4-202ENST00000412866 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
VSIG4-202ENST00000412866 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
VSIG4-202ENST00000412866 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
VSIG4-202ENST00000412866 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
VSIG4-202ENST00000412866 PPLO60437 1756 aa13.61□□□□□ -0.23
VSIG4-202ENST00000412866 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
VSIG4-202ENST00000412866 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
VSIG4-202ENST00000412866 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
VSIG4-202ENST00000412866 CCDC7Q96M83 1385 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms