RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 NCOA1Q15788 1441 aa18.05■□□□□ 0.48
LINC00963-201ENST00000412141 NCKAP5LQ9HCH0 1330 aa18.04■□□□□ 0.48
LINC00963-201ENST00000412141 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
LINC00963-201ENST00000412141 ABCC5O15440 1437 aa18.01■□□□□ 0.47
LINC00963-201ENST00000412141 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
LINC00963-201ENST00000412141 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
LINC00963-201ENST00000412141 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
LINC00963-201ENST00000412141 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
LINC00963-201ENST00000412141 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
LINC00963-201ENST00000412141 MYO3AQ8NEV4 1616 aa18■□□□□ 0.47
LINC00963-201ENST00000412141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
LINC00963-201ENST00000412141 TNRQ92752 1358 aa17.99■□□□□ 0.47
LINC00963-201ENST00000412141 MAST1Q9Y2H9 1570 aa17.99■□□□□ 0.47
LINC00963-201ENST00000412141 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
LINC00963-201ENST00000412141 KIF15Q9NS87 1388 aa17.98■□□□□ 0.47
LINC00963-201ENST00000412141 ZNF142P52746 1687 aaPredicted RBP17.97■□□□□ 0.47
LINC00963-201ENST00000412141 DAPK1P53355 1430 aa17.97■□□□□ 0.47
LINC00963-201ENST00000412141 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.47
LINC00963-201ENST00000412141 PZPP20742 1482 aa17.95■□□□□ 0.46
LINC00963-201ENST00000412141 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
LINC00963-201ENST00000412141 A2ML1A8K2U0 1454 aa17.93■□□□□ 0.46
LINC00963-201ENST00000412141 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
LINC00963-201ENST00000412141 TCOF1Q13428 1488 aaKnown RBP17.93■□□□□ 0.46
LINC00963-201ENST00000412141 PKD2Q13563 968 aa17.92■□□□□ 0.46
LINC00963-201ENST00000412141 SHANK2Q9UPX8 1470 aa17.91■□□□□ 0.46
LINC00963-201ENST00000412141 ABCC3O15438 1527 aa17.91■□□□□ 0.46
LINC00963-201ENST00000412141 ANKRD30AQ9BXX3 1397 aa17.91■□□□□ 0.46
LINC00963-201ENST00000412141 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
LINC00963-201ENST00000412141 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
LINC00963-201ENST00000412141 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
LINC00963-201ENST00000412141 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
LINC00963-201ENST00000412141 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.45
LINC00963-201ENST00000412141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC00963-201ENST00000412141 FAM135AQ9P2D6 1515 aa17.88■□□□□ 0.45
LINC00963-201ENST00000412141 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
LINC00963-201ENST00000412141 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
LINC00963-201ENST00000412141 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
LINC00963-201ENST00000412141 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
LINC00963-201ENST00000412141 ITGAEP38570 1179 aa17.87■□□□□ 0.45
LINC00963-201ENST00000412141 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
LINC00963-201ENST00000412141 CEP152O94986 1710 aa17.86■□□□□ 0.45
LINC00963-201ENST00000412141 KANK1Q14678 1352 aa17.85■□□□□ 0.45
LINC00963-201ENST00000412141 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
LINC00963-201ENST00000412141 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
LINC00963-201ENST00000412141 DISP3Q9P2K9 1392 aa17.83■□□□□ 0.45
LINC00963-201ENST00000412141 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
LINC00963-201ENST00000412141 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
LINC00963-201ENST00000412141 UGGT1Q9NYU2 1555 aa17.82■□□□□ 0.44
LINC00963-201ENST00000412141 NEURL4Q96JN8 1562 aa17.8■□□□□ 0.44
LINC00963-201ENST00000412141 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
LINC00963-201ENST00000412141 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
LINC00963-201ENST00000412141 ILDR2Q71H61 639 aa17.78■□□□□ 0.44
LINC00963-201ENST00000412141 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
LINC00963-201ENST00000412141 UBAP1LF5GYI3 381 aa17.77■□□□□ 0.44
LINC00963-201ENST00000412141 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.44
LINC00963-201ENST00000412141 ADGRL2O95490 1459 aa17.76■□□□□ 0.43
LINC00963-201ENST00000412141 ANKRD50Q9ULJ7 1429 aa17.76■□□□□ 0.43
LINC00963-201ENST00000412141 ARHGAP31Q2M1Z3 1444 aa17.75■□□□□ 0.43
LINC00963-201ENST00000412141 NPHP4O75161 1426 aaPredicted RBP17.74■□□□□ 0.43
LINC00963-201ENST00000412141 DEPDC5O75140 1603 aa17.74■□□□□ 0.43
LINC00963-201ENST00000412141 IDI1Q13907 227 aa17.73■□□□□ 0.43
LINC00963-201ENST00000412141 TXNDC2Q86VQ3 553 aa17.73■□□□□ 0.43
LINC00963-201ENST00000412141 LTKP29376 864 aa17.72■□□□□ 0.43
LINC00963-201ENST00000412141 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
LINC00963-201ENST00000412141 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
LINC00963-201ENST00000412141 EID1Q9Y6B2 187 aa17.7■□□□□ 0.42
LINC00963-201ENST00000412141 CPS1P31327 1500 aa17.7■□□□□ 0.42
LINC00963-201ENST00000412141 MED14O60244 1454 aa17.69■□□□□ 0.42
LINC00963-201ENST00000412141 VWDEQ8N2E2 1590 aa17.69■□□□□ 0.42
LINC00963-201ENST00000412141 LMTK2Q8IWU2 1503 aa17.68■□□□□ 0.42
LINC00963-201ENST00000412141 UBR1Q8IWV7 1749 aa17.68■□□□□ 0.42
LINC00963-201ENST00000412141 PIP4K2BP78356 416 aa17.67■□□□□ 0.42
LINC00963-201ENST00000412141 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
LINC00963-201ENST00000412141 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
LINC00963-201ENST00000412141 EFCAB6Q5THR3 1501 aa17.66■□□□□ 0.42
LINC00963-201ENST00000412141 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
LINC00963-201ENST00000412141 IQGAP1P46940 1657 aa17.65■□□□□ 0.42
LINC00963-201ENST00000412141 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
LINC00963-201ENST00000412141 BCANQ96GW7 911 aa17.65■□□□□ 0.42
LINC00963-201ENST00000412141 SOCS7O14512 581 aa17.64■□□□□ 0.41
LINC00963-201ENST00000412141 SYNMO15061 1565 aa17.64■□□□□ 0.41
LINC00963-201ENST00000412141 NUP155O75694 1391 aa17.64■□□□□ 0.41
LINC00963-201ENST00000412141 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
LINC00963-201ENST00000412141 NOS1P29475 1434 aa17.64■□□□□ 0.41
LINC00963-201ENST00000412141 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
LINC00963-201ENST00000412141 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
LINC00963-201ENST00000412141 ARHGAP23Q9P227 1491 aa17.62■□□□□ 0.41
LINC00963-201ENST00000412141 HSPA1LP34931 641 aa17.61■□□□□ 0.41
LINC00963-201ENST00000412141 SLIT1O75093 1534 aa17.61■□□□□ 0.41
LINC00963-201ENST00000412141 TOM1O60784 492 aa17.6■□□□□ 0.41
LINC00963-201ENST00000412141 ALKQ9UM73 1620 aa17.6■□□□□ 0.41
LINC00963-201ENST00000412141 STRCP1A6NGW2 1772 aa17.59■□□□□ 0.41
LINC00963-201ENST00000412141 UNC13BO14795 1591 aa17.58■□□□□ 0.41
LINC00963-201ENST00000412141 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
LINC00963-201ENST00000412141 TET3O43151 1660 aa17.58■□□□□ 0.4
LINC00963-201ENST00000412141 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
LINC00963-201ENST00000412141 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
LINC00963-201ENST00000412141 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
LINC00963-201ENST00000412141 ADGRB3O60242 1522 aa17.56■□□□□ 0.4
LINC00963-201ENST00000412141 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms