RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 C6orf132Q5T0Z8 1188 aa5.11□□□□□ -1.59
RNU2-55P-201ENST00000411146 KIAA1468Q9P260 1216 aa5.11□□□□□ -1.59
RNU2-55P-201ENST00000411146 PHF14O94880 888 aa5.1□□□□□ -1.59
RNU2-55P-201ENST00000411146 BCAMP50895 628 aa5.1□□□□□ -1.59
RNU2-55P-201ENST00000411146 TSR1Q2NL82 804 aaKnown RBP5.1□□□□□ -1.59
RNU2-55P-201ENST00000411146 TYW1BQ6NUM6 668 aa5.1□□□□□ -1.59
RNU2-55P-201ENST00000411146 MRPL50Q8N5N7 158 aaKnown RBP5.1□□□□□ -1.59
RNU2-55P-201ENST00000411146 SEPT9Q9UHD8 586 aaPredicted RBP5.1□□□□□ -1.59
RNU2-55P-201ENST00000411146 PPP1R3GB7ZBB8 358 aa5.09□□□□□ -1.59
RNU2-55P-201ENST00000411146 FAM198AQ9UFP1 575 aa5.09□□□□□ -1.59
RNU2-55P-201ENST00000411146 GOLGA8CPA6NN73 597 aa5.08□□□□□ -1.6
RNU2-55P-201ENST00000411146 PAXIP1Q6ZW49 1069 aaPredicted RBP5.08□□□□□ -1.6
RNU2-55P-201ENST00000411146 RABGEF1Q9UJ41 708 aa5.08□□□□□ -1.6
RNU2-55P-201ENST00000411146 A0A0G2JS52 829 aa5.07□□□□□ -1.6
RNU2-55P-201ENST00000411146 RGS20O76081 388 aa5.07□□□□□ -1.6
RNU2-55P-201ENST00000411146 SPRYD3Q8NCJ5 442 aa5.07□□□□□ -1.6
RNU2-55P-201ENST00000411146 CFAP44Q96MT7 982 aa5.07□□□□□ -1.6
RNU2-55P-201ENST00000411146 NBPF3Q9H094 633 aa5.07□□□□□ -1.6
RNU2-55P-201ENST00000411146 TSKSQ9UJT2 592 aa5.07□□□□□ -1.6
RNU2-55P-201ENST00000411146 SMAPO00193 183 aa5.06□□□□□ -1.6
RNU2-55P-201ENST00000411146 ZFRQ96KR1 1074 aaKnown RBP5.06□□□□□ -1.6
RNU2-55P-201ENST00000411146 WBP1LQ9NX94 342 aa5.06□□□□□ -1.6
RNU2-55P-201ENST00000411146 NBR1Q14596 966 aa5.05□□□□□ -1.6
RNU2-55P-201ENST00000411146 FBXW7Q969H0 707 aa5.05□□□□□ -1.6
RNU2-55P-201ENST00000411146 GRXCR2A6NFK2 248 aa5.04□□□□□ -1.6
RNU2-55P-201ENST00000411146 TRIM6-TRIM34B2RNG4 842 aa5.04□□□□□ -1.6
RNU2-55P-201ENST00000411146 EPAS1Q99814 870 aa5.04□□□□□ -1.6
RNU2-55P-201ENST00000411146 CDHR5Q9HBB8 845 aa5.04□□□□□ -1.6
RNU2-55P-201ENST00000411146 SOWAHBA6NEL2 793 aa5.03□□□□□ -1.6
RNU2-55P-201ENST00000411146 ITGBL1O95965 494 aaPredicted RBP5.03□□□□□ -1.6
RNU2-55P-201ENST00000411146 EN1Q05925 392 aaPredicted RBP5.03□□□□□ -1.6
RNU2-55P-201ENST00000411146 PDIA6Q15084 440 aa5.03□□□□□ -1.6
RNU2-55P-201ENST00000411146 MAP3K7O43318 606 aa5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 ONECUT3O60422 494 aaPredicted RBP5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 OSBPP22059 807 aa5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 E2F4Q16254 413 aa5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 LAPTM4BQ86VI4 370 aa5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 ANKK1Q8NFD2 765 aa5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 TSHZ2Q9NRE2 1034 aa5.02□□□□□ -1.61
RNU2-55P-201ENST00000411146 IRX2Q9BZI1 471 aaPredicted RBP5.01□□□□□ -1.61
RNU2-55P-201ENST00000411146 CDCA7LQ96GN5 454 aa5□□□□□ -1.61
RNU2-55P-201ENST00000411146 HPS5Q9UPZ3 1129 aa5□□□□□ -1.61
RNU2-55P-201ENST00000411146 PRSS12P56730 875 aa4.99□□□□□ -1.61
RNU2-55P-201ENST00000411146 FAM98CQ17RN3 349 aaKnown RBP4.99□□□□□ -1.61
RNU2-55P-201ENST00000411146 NPDC1Q9NQX5 325 aaPredicted RBP4.99□□□□□ -1.61
RNU2-55P-201ENST00000411146 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.99□□□□□ -1.61
RNU2-55P-201ENST00000411146 MLLT3P42568 568 aaPredicted RBP4.98□□□□□ -1.61
RNU2-55P-201ENST00000411146 AMER1Q5JTC6 1135 aaPredicted RBP4.98□□□□□ -1.61
RNU2-55P-201ENST00000411146 NYAP1Q6ZVC0 841 aa4.98□□□□□ -1.61
RNU2-55P-201ENST00000411146 SAMD7Q7Z3H4 446 aa4.98□□□□□ -1.61
RNU2-55P-201ENST00000411146 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.98□□□□□ -1.61
RNU2-55P-201ENST00000411146 SPDYE16A6NNV3 312 aaPredicted RBP4.97□□□□□ -1.61
RNU2-55P-201ENST00000411146 PACS2Q86VP3 889 aa4.97□□□□□ -1.61
RNU2-55P-201ENST00000411146 TATDN2Q93075 761 aa4.97□□□□□ -1.61
RNU2-55P-201ENST00000411146 ARIH1Q9Y4X5 557 aaPredicted RBP4.97□□□□□ -1.61
RNU2-55P-201ENST00000411146 NUDT18Q6ZVK8 323 aa4.96□□□□□ -1.62
RNU2-55P-201ENST00000411146 ZNF516Q92618 1163 aa4.96□□□□□ -1.62
RNU2-55P-201ENST00000411146 WDR70Q9NW82 654 aa4.96□□□□□ -1.62
RNU2-55P-201ENST00000411146 TSR3Q9UJK0 312 aaKnown RBP4.96□□□□□ -1.62
RNU2-55P-201ENST00000411146 PNMA3Q9UL41 463 aa4.96□□□□□ -1.62
RNU2-55P-201ENST00000411146 KCNC4Q03721 635 aa4.95□□□□□ -1.62
RNU2-55P-201ENST00000411146 TJAP1Q5JTD0 557 aa4.95□□□□□ -1.62
RNU2-55P-201ENST00000411146 LRCH3Q96II8 777 aa4.95□□□□□ -1.62
RNU2-55P-201ENST00000411146 LCE2BO14633 110 aa4.94□□□□□ -1.62
RNU2-55P-201ENST00000411146 PPP4CP60510 307 aa4.94□□□□□ -1.62
RNU2-55P-201ENST00000411146 FAM161AQ3B820 660 aa4.94□□□□□ -1.62
RNU2-55P-201ENST00000411146 PADI6Q6TGC4 694 aa4.94□□□□□ -1.62
RNU2-55P-201ENST00000411146 NKX2-3Q8TAU0 364 aa4.94□□□□□ -1.62
RNU2-55P-201ENST00000411146 APLP1P51693 650 aa4.93□□□□□ -1.62
RNU2-55P-201ENST00000411146 TTC13Q8NBP0 860 aa4.93□□□□□ -1.62
RNU2-55P-201ENST00000411146 KCNV2Q8TDN2 545 aa4.93□□□□□ -1.62
RNU2-55P-201ENST00000411146 SWT1Q5T5J6 900 aaKnown RBP4.92□□□□□ -1.62
RNU2-55P-201ENST00000411146 EYA1Q99502 592 aa4.91□□□□□ -1.62
RNU2-55P-201ENST00000411146 MTRQ99707 1265 aa4.91□□□□□ -1.62
RNU2-55P-201ENST00000411146 RNF40O75150 1001 aa4.9□□□□□ -1.63
RNU2-55P-201ENST00000411146 PPP1R18Q6NYC8 613 aa4.89□□□□□ -1.63
RNU2-55P-201ENST00000411146 Q6ZNB5 142 aa4.89□□□□□ -1.63
RNU2-55P-201ENST00000411146 NBPF26B4DH59 902 aa4.88□□□□□ -1.63
RNU2-55P-201ENST00000411146 SEMA3EO15041 775 aa4.88□□□□□ -1.63
RNU2-55P-201ENST00000411146 COPS2P61201 443 aa4.88□□□□□ -1.63
RNU2-55P-201ENST00000411146 CERKQ8TCT0 537 aa4.88□□□□□ -1.63
RNU2-55P-201ENST00000411146 PTGDRQ13258 359 aa4.87□□□□□ -1.63
RNU2-55P-201ENST00000411146 EMID1Q96A84 441 aaPredicted RBP4.87□□□□□ -1.63
RNU2-55P-201ENST00000411146 PRKD2Q9BZL6 878 aa4.87□□□□□ -1.63
RNU2-55P-201ENST00000411146 GFRA3O60609 400 aa4.86□□□□□ -1.63
RNU2-55P-201ENST00000411146 ARHGEF1Q92888 912 aaKnown RBP4.86□□□□□ -1.63
RNU2-55P-201ENST00000411146 IL21Q9HBE4 155 aa4.86□□□□□ -1.63
RNU2-55P-201ENST00000411146 NUTM2FA1L443 756 aa4.85□□□□□ -1.63
RNU2-55P-201ENST00000411146 FECHP22830 423 aa4.85□□□□□ -1.63
RNU2-55P-201ENST00000411146 LAPTM4AQ15012 233 aa4.85□□□□□ -1.63
RNU2-55P-201ENST00000411146 RBM27Q9P2N5 1060 aaKnown RBP4.85□□□□□ -1.63
RNU2-55P-201ENST00000411146 BLOC1S3Q6QNY0 202 aa4.84□□□□□ -1.63
RNU2-55P-201ENST00000411146 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.84□□□□□ -1.63
RNU2-55P-201ENST00000411146 ADGRG1Q9Y653 693 aa4.84□□□□□ -1.63
RNU2-55P-201ENST00000411146 RCCD1A6NED2 376 aa4.83□□□□□ -1.64
RNU2-55P-201ENST00000411146 PPEF1O14829 653 aaPredicted RBP4.83□□□□□ -1.64
RNU2-55P-201ENST00000411146 TLL1O43897 1013 aa4.83□□□□□ -1.64
RNU2-55P-201ENST00000411146 SLC10A3P09131 477 aa4.83□□□□□ -1.64
RNU2-55P-201ENST00000411146 RBM26Q5T8P6 1007 aaKnown RBP4.83□□□□□ -1.64
RNU2-55P-201ENST00000411146 TRAF7Q6Q0C0 670 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms