RNA–Protein interactions for RNA: ENST00000410773.1

RN7SKP39-201, Transcript of RNA, 7SK small nuclear pseudogene 39, humanhuman

BASIC

Gene RN7SKP39, Length 322 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP39-201ENST00000410773 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
RN7SKP39-201ENST00000410773 EEA1Q15075 1411 aa13.1□□□□□ -0.31
RN7SKP39-201ENST00000410773 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
RN7SKP39-201ENST00000410773 TNRQ92752 1358 aa13.09□□□□□ -0.31
RN7SKP39-201ENST00000410773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.09□□□□□ -0.31
RN7SKP39-201ENST00000410773 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
RN7SKP39-201ENST00000410773 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
RN7SKP39-201ENST00000410773 PZPP20742 1482 aa13.06□□□□□ -0.32
RN7SKP39-201ENST00000410773 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP39-201ENST00000410773 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
RN7SKP39-201ENST00000410773 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
RN7SKP39-201ENST00000410773 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
RN7SKP39-201ENST00000410773 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
RN7SKP39-201ENST00000410773 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
RN7SKP39-201ENST00000410773 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
RN7SKP39-201ENST00000410773 NLRP1Q9C000 1473 aa13.04□□□□□ -0.32
RN7SKP39-201ENST00000410773 THEMISQ8N1K5 641 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP39-201ENST00000410773 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
RN7SKP39-201ENST00000410773 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
RN7SKP39-201ENST00000410773 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
RN7SKP39-201ENST00000410773 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
RN7SKP39-201ENST00000410773 MIA2Q96PC5 1412 aa13□□□□□ -0.33
RN7SKP39-201ENST00000410773 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
RN7SKP39-201ENST00000410773 FAM135BQ49AJ0 1406 aa12.99□□□□□ -0.33
RN7SKP39-201ENST00000410773 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
RN7SKP39-201ENST00000410773 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
RN7SKP39-201ENST00000410773 DHX29Q7Z478 1369 aaKnown RBP12.95□□□□□ -0.34
RN7SKP39-201ENST00000410773 UBR1Q8IWV7 1749 aa12.94□□□□□ -0.34
RN7SKP39-201ENST00000410773 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
RN7SKP39-201ENST00000410773 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
RN7SKP39-201ENST00000410773 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
RN7SKP39-201ENST00000410773 KIF3BO15066 747 aa12.93□□□□□ -0.34
RN7SKP39-201ENST00000410773 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP39-201ENST00000410773 SCAF11Q99590 1463 aaKnown RBP12.92□□□□□ -0.34
RN7SKP39-201ENST00000410773 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
RN7SKP39-201ENST00000410773 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
RN7SKP39-201ENST00000410773 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
RN7SKP39-201ENST00000410773 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
RN7SKP39-201ENST00000410773 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
RN7SKP39-201ENST00000410773 CCNB3Q8WWL7 1395 aa12.9□□□□□ -0.34
RN7SKP39-201ENST00000410773 TRIM52Q96A61 297 aa12.89□□□□□ -0.35
RN7SKP39-201ENST00000410773 ERVK-7P63135 1459 aa12.89□□□□□ -0.35
RN7SKP39-201ENST00000410773 LRRC9Q6ZRR7 1453 aa12.89□□□□□ -0.35
RN7SKP39-201ENST00000410773 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 LRP6O75581 1613 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 JCADQ9P266 1359 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 NCOA2Q15596 1464 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 ABCC3O15438 1527 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 SLIT1O75093 1534 aa12.88□□□□□ -0.35
RN7SKP39-201ENST00000410773 TIAM1Q13009 1591 aa12.87□□□□□ -0.35
RN7SKP39-201ENST00000410773 COL16A1Q07092 1604 aaPredicted RBP12.87□□□□□ -0.35
RN7SKP39-201ENST00000410773 CFAP65Q6ZU64 1925 aaKnown RBP12.86□□□□□ -0.35
RN7SKP39-201ENST00000410773 LTKP29376 864 aa12.86□□□□□ -0.35
RN7SKP39-201ENST00000410773 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
RN7SKP39-201ENST00000410773 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
RN7SKP39-201ENST00000410773 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.36
RN7SKP39-201ENST00000410773 EP400Q96L91 3159 aa12.83□□□□□ -0.36
RN7SKP39-201ENST00000410773 CEP152O94986 1710 aa12.82□□□□□ -0.36
RN7SKP39-201ENST00000410773 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
RN7SKP39-201ENST00000410773 CDK12Q9NYV4 1490 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP39-201ENST00000410773 PRDM15P57071 1507 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP39-201ENST00000410773 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
RN7SKP39-201ENST00000410773 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
RN7SKP39-201ENST00000410773 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
RN7SKP39-201ENST00000410773 MEX3CQ5U5Q3 659 aaKnown RBP12.8□□□□□ -0.36
RN7SKP39-201ENST00000410773 NWD1Q149M9 1564 aa12.8□□□□□ -0.36
RN7SKP39-201ENST00000410773 NKTRP30414 1462 aaKnown RBP12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 RXRBP28702 533 aa12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
RN7SKP39-201ENST00000410773 KCNA6P17658 529 aa12.78□□□□□ -0.36
RN7SKP39-201ENST00000410773 PROSER2Q86WR7 435 aaPredicted RBP12.78□□□□□ -0.36
RN7SKP39-201ENST00000410773 MSH6P52701 1360 aa12.78□□□□□ -0.36
RN7SKP39-201ENST00000410773 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.36
RN7SKP39-201ENST00000410773 SLAIN2Q9P270 581 aa12.77□□□□□ -0.37
RN7SKP39-201ENST00000410773 EID1Q9Y6B2 187 aa12.77□□□□□ -0.37
RN7SKP39-201ENST00000410773 TET3O43151 1660 aa12.77□□□□□ -0.37
RN7SKP39-201ENST00000410773 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.37
RN7SKP39-201ENST00000410773 TMEM2Q9UHN6 1383 aa12.76□□□□□ -0.37
RN7SKP39-201ENST00000410773 EHBP1L1Q8N3D4 1523 aa12.76□□□□□ -0.37
RN7SKP39-201ENST00000410773 RGS12O14924 1447 aa12.75□□□□□ -0.37
RN7SKP39-201ENST00000410773 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP39-201ENST00000410773 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
RN7SKP39-201ENST00000410773 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
RN7SKP39-201ENST00000410773 SETBP1Q9Y6X0 1596 aa12.73□□□□□ -0.37
RN7SKP39-201ENST00000410773 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
RN7SKP39-201ENST00000410773 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
RN7SKP39-201ENST00000410773 DIP2AQ14689 1571 aa12.72□□□□□ -0.37
RN7SKP39-201ENST00000410773 AFF2P51816 1311 aa12.7□□□□□ -0.38
RN7SKP39-201ENST00000410773 MAST1Q9Y2H9 1570 aa12.7□□□□□ -0.38
RN7SKP39-201ENST00000410773 CHD2O14647 1828 aaKnown RBP12.7□□□□□ -0.38
RN7SKP39-201ENST00000410773 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
RN7SKP39-201ENST00000410773 ARHGAP31Q2M1Z3 1444 aa12.7□□□□□ -0.38
RN7SKP39-201ENST00000410773 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.68□□□□□ -0.38
RN7SKP39-201ENST00000410773 NUTM2BA6NNL0 878 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms