RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 C2orf72A6NCS6 295 aa8.16□□□□□ -1.1
RNU4-25P-201ENST00000410569 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
RNU4-25P-201ENST00000410569 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
RNU4-25P-201ENST00000410569 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
RNU4-25P-201ENST00000410569 RIMBP2O15034 1052 aa8.15□□□□□ -1.1
RNU4-25P-201ENST00000410569 EMP3P54852 163 aa8.15□□□□□ -1.1
RNU4-25P-201ENST00000410569 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.1
RNU4-25P-201ENST00000410569 CDAN1Q8IWY9 1227 aa8.15□□□□□ -1.1
RNU4-25P-201ENST00000410569 CUL7Q14999 1698 aa8.14□□□□□ -1.11
RNU4-25P-201ENST00000410569 JPH4Q96JJ6 628 aa8.14□□□□□ -1.11
RNU4-25P-201ENST00000410569 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
RNU4-25P-201ENST00000410569 GTPBP6O43824 516 aaPredicted RBP8.13□□□□□ -1.11
RNU4-25P-201ENST00000410569 TMC2Q8TDI7 906 aa8.13□□□□□ -1.11
RNU4-25P-201ENST00000410569 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
RNU4-25P-201ENST00000410569 GPR153Q6NV75 609 aa8.12□□□□□ -1.11
RNU4-25P-201ENST00000410569 POTEB3A0JP26 581 aa8.11□□□□□ -1.11
RNU4-25P-201ENST00000410569 POTEBQ6S5H4 581 aa8.11□□□□□ -1.11
RNU4-25P-201ENST00000410569 KIAA0586Q9BVV6 1533 aa8.11□□□□□ -1.11
RNU4-25P-201ENST00000410569 ADGRL1O94910 1474 aa8.11□□□□□ -1.11
RNU4-25P-201ENST00000410569 HS3ST6Q96QI5 342 aa8.1□□□□□ -1.11
RNU4-25P-201ENST00000410569 MAP3K4Q9Y6R4 1608 aa8.1□□□□□ -1.11
RNU4-25P-201ENST00000410569 GLI2P10070 1586 aa8.1□□□□□ -1.11
RNU4-25P-201ENST00000410569 FAM205CA6NFA0 338 aa8.09□□□□□ -1.11
RNU4-25P-201ENST00000410569 SLC34A2O95436 690 aa8.09□□□□□ -1.11
RNU4-25P-201ENST00000410569 GPHNQ9NQX3 736 aaPredicted RBP8.09□□□□□ -1.11
RNU4-25P-201ENST00000410569 HECW2Q9P2P5 1572 aa8.09□□□□□ -1.11
RNU4-25P-201ENST00000410569 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
RNU4-25P-201ENST00000410569 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
RNU4-25P-201ENST00000410569 SUPT5HO00267 1087 aaKnown RBP8.07□□□□□ -1.12
RNU4-25P-201ENST00000410569 FOXK1P85037 733 aa8.07□□□□□ -1.12
RNU4-25P-201ENST00000410569 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
RNU4-25P-201ENST00000410569 IQGAP2Q13576 1575 aa8.06□□□□□ -1.12
RNU4-25P-201ENST00000410569 ASXL2Q76L83 1435 aa8.06□□□□□ -1.12
RNU4-25P-201ENST00000410569 ZCCHC11Q5TAX3 1644 aaKnown RBP8.06□□□□□ -1.12
RNU4-25P-201ENST00000410569 ERBB3P21860 1342 aa8.05□□□□□ -1.12
RNU4-25P-201ENST00000410569 CRISPLD2Q9H0B8 497 aa8.05□□□□□ -1.12
RNU4-25P-201ENST00000410569 COL17A1Q9UMD9 1497 aaPredicted RBP8.05□□□□□ -1.12
RNU4-25P-201ENST00000410569 DSG2Q14126 1118 aa8.04□□□□□ -1.12
RNU4-25P-201ENST00000410569 PLPP6Q8IY26 295 aa8.04□□□□□ -1.12
RNU4-25P-201ENST00000410569 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
RNU4-25P-201ENST00000410569 KHSRPQ92945 711 aaKnown RBP eCLIP8.04□□□□□ -1.12
RNU4-25P-201ENST00000410569 UHRF1BP1LA0JNW5 1464 aa8.04□□□□□ -1.12
RNU4-25P-201ENST00000410569 PLB1Q6P1J6 1458 aa8.04□□□□□ -1.12
RNU4-25P-201ENST00000410569 PTPRGP23470 1445 aa8.03□□□□□ -1.12
RNU4-25P-201ENST00000410569 KIF27Q86VH2 1401 aa8.03□□□□□ -1.12
RNU4-25P-201ENST00000410569 IGF1RP08069 1367 aa8.03□□□□□ -1.12
RNU4-25P-201ENST00000410569 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
RNU4-25P-201ENST00000410569 EPRSP07814 1512 aaKnown RBP8.03□□□□□ -1.12
RNU4-25P-201ENST00000410569 DISP1Q96F81 1524 aa8.03□□□□□ -1.12
RNU4-25P-201ENST00000410569 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 VARS2Q5ST30 1063 aaKnown RBP8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 KIAA0556O60303 1618 aa8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 KDM5BQ9UGL1 1544 aa8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 NCKAP5LQ9HCH0 1330 aa8.02□□□□□ -1.13
RNU4-25P-201ENST00000410569 PTCD2Q8WV60 388 aaKnown RBP8.01□□□□□ -1.13
RNU4-25P-201ENST00000410569 CARMIL2Q6F5E8 1435 aa8.01□□□□□ -1.13
RNU4-25P-201ENST00000410569 KIF21BO75037 1637 aa8□□□□□ -1.13
RNU4-25P-201ENST00000410569 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
RNU4-25P-201ENST00000410569 UACAQ9BZF9 1416 aa8□□□□□ -1.13
RNU4-25P-201ENST00000410569 TTBK1Q5TCY1 1321 aaPredicted RBP8□□□□□ -1.13
RNU4-25P-201ENST00000410569 TEX14Q8IWB6 1497 aa8□□□□□ -1.13
RNU4-25P-201ENST00000410569 UGGT2Q9NYU1 1516 aa7.99□□□□□ -1.13
RNU4-25P-201ENST00000410569 NUDT7P0C024 238 aa7.99□□□□□ -1.13
RNU4-25P-201ENST00000410569 PDE4AP27815 886 aa7.99□□□□□ -1.13
RNU4-25P-201ENST00000410569 CFAP43Q8NDM7 1665 aa7.98□□□□□ -1.13
RNU4-25P-201ENST00000410569 CTTNBP2Q8WZ74 1663 aa7.98□□□□□ -1.13
RNU4-25P-201ENST00000410569 CARMIL1Q5VZK9 1371 aa7.98□□□□□ -1.13
RNU4-25P-201ENST00000410569 PPP1R15BQ5SWA1 713 aa7.98□□□□□ -1.13
RNU4-25P-201ENST00000410569 ZNF687Q8N1G0 1237 aa7.98□□□□□ -1.13
RNU4-25P-201ENST00000410569 WDR7Q9Y4E6 1490 aa7.97□□□□□ -1.13
RNU4-25P-201ENST00000410569 MFSD10Q14728 455 aa7.96□□□□□ -1.14
RNU4-25P-201ENST00000410569 CADPS2Q86UW7 1296 aa7.96□□□□□ -1.14
RNU4-25P-201ENST00000410569 SPNS2Q8IVW8 549 aa7.96□□□□□ -1.14
RNU4-25P-201ENST00000410569 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
RNU4-25P-201ENST00000410569 LARP6Q9BRS8 491 aaKnown RBP7.95□□□□□ -1.14
RNU4-25P-201ENST00000410569 LHX6Q9UPM6 363 aa7.95□□□□□ -1.14
RNU4-25P-201ENST00000410569 ABCA8O94911 1581 aa7.94□□□□□ -1.14
RNU4-25P-201ENST00000410569 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.94□□□□□ -1.14
RNU4-25P-201ENST00000410569 MAGI3Q5TCQ9 1506 aa7.93□□□□□ -1.14
RNU4-25P-201ENST00000410569 TBC1D12O60347 775 aa7.93□□□□□ -1.14
RNU4-25P-201ENST00000410569 SPRYD3Q8NCJ5 442 aa7.93□□□□□ -1.14
RNU4-25P-201ENST00000410569 DDX27Q96GQ7 796 aaKnown RBP7.93□□□□□ -1.14
RNU4-25P-201ENST00000410569 RAPGEF2Q9Y4G8 1499 aa7.92□□□□□ -1.14
RNU4-25P-201ENST00000410569 ADAMTSL3P82987 1691 aa7.92□□□□□ -1.14
RNU4-25P-201ENST00000410569 FRMPD1Q5SYB0 1578 aa7.9□□□□□ -1.14
RNU4-25P-201ENST00000410569 PSDA5PKW4 1024 aaPredicted RBP7.9□□□□□ -1.14
RNU4-25P-201ENST00000410569 MMRN1Q13201 1228 aa7.9□□□□□ -1.14
RNU4-25P-201ENST00000410569 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNU4-25P-201ENST00000410569 CD109Q6YHK3 1445 aa7.89□□□□□ -1.15
RNU4-25P-201ENST00000410569 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
RNU4-25P-201ENST00000410569 MADDQ8WXG6 1647 aa7.89□□□□□ -1.15
RNU4-25P-201ENST00000410569 PAXIP1Q6ZW49 1069 aaPredicted RBP7.88□□□□□ -1.15
RNU4-25P-201ENST00000410569 ABCA9Q8IUA7 1624 aa7.88□□□□□ -1.15
RNU4-25P-201ENST00000410569 ARAP3Q8WWN8 1544 aa7.88□□□□□ -1.15
RNU4-25P-201ENST00000410569 PBX2P40425 430 aa7.87□□□□□ -1.15
RNU4-25P-201ENST00000410569 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
RNU4-25P-201ENST00000410569 PCF11O94913 1555 aaKnown RBP7.87□□□□□ -1.15
RNU4-25P-201ENST00000410569 PTPRMP28827 1452 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms