RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CDH23Q9H251 3354 aa4.94□□□□□ -1.62
RGPD3-202ENST00000409886 NWD1Q149M9 1564 aa4.94□□□□□ -1.62
RGPD3-202ENST00000409886 KDM5AP29375 1690 aaKnown RBP4.93□□□□□ -1.62
RGPD3-202ENST00000409886 UPF1Q92900 1129 aaKnown RBP eCLIP4.93□□□□□ -1.62
RGPD3-202ENST00000409886 CLTCQ00610 1675 aaKnown RBP4.93□□□□□ -1.62
RGPD3-202ENST00000409886 PHLPP1O60346 1717 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 CARMIL1Q5VZK9 1371 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 ADGBQ8N7X0 1667 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 MSH5O43196 834 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 FGD6Q6ZV73 1430 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 ATP7AQ04656 1500 aa4.92□□□□□ -1.62
RGPD3-202ENST00000409886 DMDP11532 3685 aa4.92□□□□□ -1.62
RGPD3-202ENST00000409886 RAPGEF3O95398 923 aa4.92□□□□□ -1.62
RGPD3-202ENST00000409886 AHDC1Q5TGY3 1603 aaPredicted RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 PRKCSHP14314 528 aaPredicted RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 UNC13BO14795 1591 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 COL16A1Q07092 1604 aaPredicted RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 DIEXFQ68CQ4 756 aaKnown RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 TSHZ2Q9NRE2 1034 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 ROBO1Q9Y6N7 1651 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 PLCH2O75038 1416 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 PPP6R1Q9UPN7 881 aa4.9□□□□□ -1.62
RGPD3-202ENST00000409886 KIDINS220Q9ULH0 1771 aa4.9□□□□□ -1.62
RGPD3-202ENST00000409886 ZNF335Q9H4Z2 1342 aaPredicted RBP4.9□□□□□ -1.63
RGPD3-202ENST00000409886 CAMSAP2Q08AD1 1489 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 PREX2Q70Z35 1606 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 NLRP1Q9C000 1473 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 ABCC1P33527 1531 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 UNC80Q8N2C7 3258 aa4.88□□□□□ -1.63
RGPD3-202ENST00000409886 INO80Q9ULG1 1556 aaPredicted RBP4.88□□□□□ -1.63
RGPD3-202ENST00000409886 POTEAQ6S8J7 498 aa4.87□□□□□ -1.63
RGPD3-202ENST00000409886 DIP2AQ14689 1571 aa4.87□□□□□ -1.63
RGPD3-202ENST00000409886 ZNF772Q68DY9 489 aaPredicted RBP4.87□□□□□ -1.63
RGPD3-202ENST00000409886 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.87□□□□□ -1.63
RGPD3-202ENST00000409886 RANBP2P49792 3224 aaKnown RBP4.87□□□□□ -1.63
RGPD3-202ENST00000409886 LAMC1P11047 1609 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 SETBP1Q9Y6X0 1596 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 NPHP4O75161 1426 aaPredicted RBP4.86□□□□□ -1.63
RGPD3-202ENST00000409886 SPATA31A6Q5VVP1 1343 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 NUP153P49790 1475 aaKnown RBP4.86□□□□□ -1.63
RGPD3-202ENST00000409886 CCDC125Q86Z20 511 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 TIAM1Q13009 1591 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 PCDH10Q9P2E7 1040 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 NKTRP30414 1462 aaKnown RBP4.86□□□□□ -1.63
RGPD3-202ENST00000409886 ARHGAP23Q9P227 1491 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 JCADQ9P266 1359 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 SCAPERQ9BY12 1400 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 PELP1Q8IZL8 1130 aaKnown RBP4.85□□□□□ -1.63
RGPD3-202ENST00000409886 ANO8Q9HCE9 1232 aaPredicted RBP4.85□□□□□ -1.63
RGPD3-202ENST00000409886 CDC42BPBQ9Y5S2 1711 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 ATAD2Q6PL18 1390 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 NCOA3Q9Y6Q9 1424 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 MROH1Q8NDA8 1641 aa4.84□□□□□ -1.63
RGPD3-202ENST00000409886 MAP3K1Q13233 1512 aa4.84□□□□□ -1.63
RGPD3-202ENST00000409886 PZPP20742 1482 aa4.84□□□□□ -1.63
RGPD3-202ENST00000409886 SUPT16HQ9Y5B9 1047 aaKnown RBP4.84□□□□□ -1.63
RGPD3-202ENST00000409886 SLIT1O75093 1534 aa4.84□□□□□ -1.64
RGPD3-202ENST00000409886 UBR1Q8IWV7 1749 aa4.83□□□□□ -1.64
RGPD3-202ENST00000409886 NCKAP5LQ9HCH0 1330 aa4.83□□□□□ -1.64
RGPD3-202ENST00000409886 ZRANB1Q9UGI0 708 aa4.83□□□□□ -1.64
RGPD3-202ENST00000409886 SAMD9LQ8IVG5 1584 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.82□□□□□ -1.64
RGPD3-202ENST00000409886 ITGAEP38570 1179 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 MARF1Q9Y4F3 1742 aaKnown RBP4.82□□□□□ -1.64
RGPD3-202ENST00000409886 UGGT1Q9NYU2 1555 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 ZMYM3Q14202 1370 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 RGS12O14924 1447 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 COL22A1Q8NFW1 1626 aaPredicted RBP4.81□□□□□ -1.64
RGPD3-202ENST00000409886 BCANQ96GW7 911 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 LRP6O75581 1613 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 GPATCH8Q9UKJ3 1502 aaKnown RBP4.81□□□□□ -1.64
RGPD3-202ENST00000409886 RGPD1P0DJD0 1748 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 ZFHX3Q15911 3703 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 PTPN23Q9H3S7 1636 aa4.8□□□□□ -1.64
RGPD3-202ENST00000409886 EIF2AK4Q9P2K8 1649 aaKnown RBP4.8□□□□□ -1.64
RGPD3-202ENST00000409886 SLC34A2O95436 690 aa4.8□□□□□ -1.64
RGPD3-202ENST00000409886 PIP4K2BP78356 416 aa4.8□□□□□ -1.64
RGPD3-202ENST00000409886 HIRIP3Q9BW71 556 aaPredicted RBP4.8□□□□□ -1.64
RGPD3-202ENST00000409886 CCER1Q8TC90 406 aaPredicted RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 BCL9LQ86UU0 1499 aa4.79□□□□□ -1.64
RGPD3-202ENST00000409886 PLEKHH2Q8IVE3 1493 aa4.79□□□□□ -1.64
RGPD3-202ENST00000409886 VIRMAQ69YN4 1812 aaKnown RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 CCDC136Q96JN2 1154 aa4.79□□□□□ -1.64
RGPD3-202ENST00000409886 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 PRDM15P57071 1507 aaPredicted RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 C11orf95C9JLR9 678 aaPredicted RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 CROCC2H7BZ55 1655 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 CDC42BPAQ5VT25 1732 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 CEBPAP49715 358 aaPredicted RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 RBM33Q96EV2 1170 aaKnown RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 ESF1Q9H501 851 aaKnown RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 ARHGAP5Q13017 1502 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 SENP3-EIF4A1A0A087X0R7 540 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 PRXQ9BXM0 1461 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 TNRQ92752 1358 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 A0A0C4DFX4 3053 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 DNAH12Q6ZR08 3092 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 RXRBP28702 533 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 SPEGQ15772 3267 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 CHD2O14647 1828 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms