RNA–Protein interactions for RNA: ENST00000409541.5

TMEM139-204, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM139, Length 1,907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-204ENST00000409541 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
TMEM139-204ENST00000409541 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
TMEM139-204ENST00000409541 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
TMEM139-204ENST00000409541 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
TMEM139-204ENST00000409541 RTEL1-TNFRSF6BF6WH68 1400 aa16.55■□□□□ 0.24
TMEM139-204ENST00000409541 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
TMEM139-204ENST00000409541 MAGI2Q86UL8 1455 aa16.55■□□□□ 0.24
TMEM139-204ENST00000409541 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
TMEM139-204ENST00000409541 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
TMEM139-204ENST00000409541 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
TMEM139-204ENST00000409541 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
TMEM139-204ENST00000409541 ADGRL1O94910 1474 aa16.52■□□□□ 0.24
TMEM139-204ENST00000409541 CCDC7Q96M83 1385 aa16.52■□□□□ 0.24
TMEM139-204ENST00000409541 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
TMEM139-204ENST00000409541 SCAPERQ9BY12 1400 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 PLA2R1Q13018 1463 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 RALGAPBQ86X10 1494 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 USP47Q96K76 1375 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
TMEM139-204ENST00000409541 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
TMEM139-204ENST00000409541 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
TMEM139-204ENST00000409541 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
TMEM139-204ENST00000409541 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
TMEM139-204ENST00000409541 KDM5CP41229 1560 aa16.46■□□□□ 0.22
TMEM139-204ENST00000409541 ATP10AO60312 1499 aa16.45■□□□□ 0.22
TMEM139-204ENST00000409541 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
TMEM139-204ENST00000409541 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
TMEM139-204ENST00000409541 POLR1AO95602 1720 aaPredicted RBP16.44■□□□□ 0.22
TMEM139-204ENST00000409541 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
TMEM139-204ENST00000409541 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
TMEM139-204ENST00000409541 DEPDC5O75140 1603 aa16.42■□□□□ 0.22
TMEM139-204ENST00000409541 A2MP01023 1474 aa16.41■□□□□ 0.22
TMEM139-204ENST00000409541 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
TMEM139-204ENST00000409541 ZNF518AQ6AHZ1 1483 aa16.41■□□□□ 0.22
TMEM139-204ENST00000409541 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
TMEM139-204ENST00000409541 CFAP74Q9C0B2 1584 aa16.4■□□□□ 0.22
TMEM139-204ENST00000409541 KANK1Q14678 1352 aa16.4■□□□□ 0.22
TMEM139-204ENST00000409541 DHX29Q7Z478 1369 aaKnown RBP16.4■□□□□ 0.22
TMEM139-204ENST00000409541 E9PCH4 1651 aa16.4■□□□□ 0.22
TMEM139-204ENST00000409541 BCORL1Q5H9F3 1711 aa16.4■□□□□ 0.22
TMEM139-204ENST00000409541 KIF3BO15066 747 aa16.39■□□□□ 0.21
TMEM139-204ENST00000409541 EIF2AK4Q9P2K8 1649 aaKnown RBP16.38■□□□□ 0.21
TMEM139-204ENST00000409541 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
TMEM139-204ENST00000409541 KIDINS220Q9ULH0 1771 aa16.37■□□□□ 0.21
TMEM139-204ENST00000409541 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
TMEM139-204ENST00000409541 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
TMEM139-204ENST00000409541 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
TMEM139-204ENST00000409541 TET3O43151 1660 aa16.36■□□□□ 0.21
TMEM139-204ENST00000409541 VWDEQ8N2E2 1590 aa16.36■□□□□ 0.21
TMEM139-204ENST00000409541 TRPM2O94759 1503 aa16.36■□□□□ 0.21
TMEM139-204ENST00000409541 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
TMEM139-204ENST00000409541 ST20-MTHFSA0A0A6YYL1 179 aa16.35■□□□□ 0.21
TMEM139-204ENST00000409541 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
TMEM139-204ENST00000409541 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.21
TMEM139-204ENST00000409541 PTPRTO14522 1441 aa16.33■□□□□ 0.21
TMEM139-204ENST00000409541 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.2
TMEM139-204ENST00000409541 KDM4FA0A1W2PPD8 638 aa16.32■□□□□ 0.2
TMEM139-204ENST00000409541 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
TMEM139-204ENST00000409541 GPRASP1Q5JY77 1395 aa16.31■□□□□ 0.2
TMEM139-204ENST00000409541 MLH3Q9UHC1 1453 aa16.31■□□□□ 0.2
TMEM139-204ENST00000409541 NEO1Q92859 1461 aa16.31■□□□□ 0.2
TMEM139-204ENST00000409541 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
TMEM139-204ENST00000409541 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
TMEM139-204ENST00000409541 LAMC1P11047 1609 aa16.29■□□□□ 0.2
TMEM139-204ENST00000409541 CEP152O94986 1710 aa16.28■□□□□ 0.2
TMEM139-204ENST00000409541 EFCAB6Q5THR3 1501 aa16.27■□□□□ 0.2
TMEM139-204ENST00000409541 CCDC184Q52MB2 194 aa16.27■□□□□ 0.19
TMEM139-204ENST00000409541 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
TMEM139-204ENST00000409541 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
TMEM139-204ENST00000409541 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
TMEM139-204ENST00000409541 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
TMEM139-204ENST00000409541 LMTK2Q8IWU2 1503 aa16.25■□□□□ 0.19
TMEM139-204ENST00000409541 ABCA6Q8N139 1617 aa16.25■□□□□ 0.19
TMEM139-204ENST00000409541 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
TMEM139-204ENST00000409541 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
TMEM139-204ENST00000409541 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
TMEM139-204ENST00000409541 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
TMEM139-204ENST00000409541 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
TMEM139-204ENST00000409541 GGT6Q6P531 493 aa16.22■□□□□ 0.19
TMEM139-204ENST00000409541 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
TMEM139-204ENST00000409541 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
TMEM139-204ENST00000409541 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
TMEM139-204ENST00000409541 TESK2Q96S53 571 aa16.19■□□□□ 0.18
TMEM139-204ENST00000409541 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
TMEM139-204ENST00000409541 DISP3Q9P2K9 1392 aa16.18■□□□□ 0.18
TMEM139-204ENST00000409541 RICTORQ6R327 1708 aa16.17■□□□□ 0.18
TMEM139-204ENST00000409541 NPATQ14207 1427 aa16.17■□□□□ 0.18
TMEM139-204ENST00000409541 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
TMEM139-204ENST00000409541 TMF1P82094 1093 aa16.16■□□□□ 0.18
TMEM139-204ENST00000409541 ABCC3O15438 1527 aa16.16■□□□□ 0.18
TMEM139-204ENST00000409541 KIF1BO60333 1816 aa16.15■□□□□ 0.18
TMEM139-204ENST00000409541 MYOM2P54296 1465 aa16.15■□□□□ 0.18
TMEM139-204ENST00000409541 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
TMEM139-204ENST00000409541 SCAF11Q99590 1463 aaKnown RBP16.14■□□□□ 0.17
TMEM139-204ENST00000409541 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
TMEM139-204ENST00000409541 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
TMEM139-204ENST00000409541 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
TMEM139-204ENST00000409541 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms