RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
PBRM1-205ENST00000409057 ARID3AQ99856 593 aa13.36□□□□□ -0.27
PBRM1-205ENST00000409057 PANK3Q9H999 370 aa13.36□□□□□ -0.27
PBRM1-205ENST00000409057 HMMRO75330 724 aa13.34□□□□□ -0.27
PBRM1-205ENST00000409057 USP47Q96K76 1375 aa13.34□□□□□ -0.27
PBRM1-205ENST00000409057 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
PBRM1-205ENST00000409057 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
PBRM1-205ENST00000409057 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.27
PBRM1-205ENST00000409057 TRAK1Q9UPV9 953 aa13.33□□□□□ -0.28
PBRM1-205ENST00000409057 IGF1RP08069 1367 aa13.33□□□□□ -0.28
PBRM1-205ENST00000409057 ST18O60284 1047 aa13.33□□□□□ -0.28
PBRM1-205ENST00000409057 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
PBRM1-205ENST00000409057 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
PBRM1-205ENST00000409057 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
PBRM1-205ENST00000409057 PHF14O94880 888 aa13.32□□□□□ -0.28
PBRM1-205ENST00000409057 SKOR2Q2VWA4 1001 aaPredicted RBP13.32□□□□□ -0.28
PBRM1-205ENST00000409057 GNL2Q13823 731 aaKnown RBP13.32□□□□□ -0.28
PBRM1-205ENST00000409057 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
PBRM1-205ENST00000409057 PLIN1O60240 522 aa13.31□□□□□ -0.28
PBRM1-205ENST00000409057 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
PBRM1-205ENST00000409057 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
PBRM1-205ENST00000409057 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
PBRM1-205ENST00000409057 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
PBRM1-205ENST00000409057 NPHP1O15259 732 aa13.3□□□□□ -0.28
PBRM1-205ENST00000409057 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
PBRM1-205ENST00000409057 E9PSI1 815 aa13.29□□□□□ -0.28
PBRM1-205ENST00000409057 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
PBRM1-205ENST00000409057 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
PBRM1-205ENST00000409057 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
PBRM1-205ENST00000409057 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
PBRM1-205ENST00000409057 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
PBRM1-205ENST00000409057 TPM4P67936 248 aa13.29□□□□□ -0.28
PBRM1-205ENST00000409057 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
PBRM1-205ENST00000409057 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
PBRM1-205ENST00000409057 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
PBRM1-205ENST00000409057 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
PBRM1-205ENST00000409057 PTPRGP23470 1445 aa13.27□□□□□ -0.29
PBRM1-205ENST00000409057 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
PBRM1-205ENST00000409057 TNNT3P45378 269 aaPredicted RBP13.26□□□□□ -0.29
PBRM1-205ENST00000409057 BCL2L13Q9BXK5 485 aa13.26□□□□□ -0.29
PBRM1-205ENST00000409057 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
PBRM1-205ENST00000409057 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
PBRM1-205ENST00000409057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.25□□□□□ -0.29
PBRM1-205ENST00000409057 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
PBRM1-205ENST00000409057 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
PBRM1-205ENST00000409057 KIF21BO75037 1637 aa13.25□□□□□ -0.29
PBRM1-205ENST00000409057 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
PBRM1-205ENST00000409057 APAF1O14727 1248 aa13.24□□□□□ -0.29
PBRM1-205ENST00000409057 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
PBRM1-205ENST00000409057 COG6Q9Y2V7 657 aa13.24□□□□□ -0.29
PBRM1-205ENST00000409057 NOL8Q76FK4 1167 aaKnown RBP13.24□□□□□ -0.29
PBRM1-205ENST00000409057 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
PBRM1-205ENST00000409057 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
PBRM1-205ENST00000409057 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
PBRM1-205ENST00000409057 CCDC34Q96HJ3 373 aa13.23□□□□□ -0.29
PBRM1-205ENST00000409057 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
PBRM1-205ENST00000409057 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
PBRM1-205ENST00000409057 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
PBRM1-205ENST00000409057 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
PBRM1-205ENST00000409057 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
PBRM1-205ENST00000409057 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
PBRM1-205ENST00000409057 AMPHP49418 695 aa13.22□□□□□ -0.29
PBRM1-205ENST00000409057 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
PBRM1-205ENST00000409057 LRRC9Q6ZRR7 1453 aa13.21□□□□□ -0.29
PBRM1-205ENST00000409057 ATP6V1DQ9Y5K8 247 aa13.21□□□□□ -0.29
PBRM1-205ENST00000409057 EVC2Q86UK5 1308 aa13.21□□□□□ -0.29
PBRM1-205ENST00000409057 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
PBRM1-205ENST00000409057 EID1Q9Y6B2 187 aa13.21□□□□□ -0.3
PBRM1-205ENST00000409057 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
PBRM1-205ENST00000409057 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
PBRM1-205ENST00000409057 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
PBRM1-205ENST00000409057 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
PBRM1-205ENST00000409057 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
PBRM1-205ENST00000409057 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
PBRM1-205ENST00000409057 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
PBRM1-205ENST00000409057 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
PBRM1-205ENST00000409057 GOLGA6L1Q8N7Z2 621 aa13.19□□□□□ -0.3
PBRM1-205ENST00000409057 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
PBRM1-205ENST00000409057 CUX1P39880 1505 aa13.18□□□□□ -0.3
PBRM1-205ENST00000409057 CNTLNQ9NXG0 1405 aa13.18□□□□□ -0.3
PBRM1-205ENST00000409057 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
PBRM1-205ENST00000409057 REC8O95072 547 aa13.16□□□□□ -0.3
PBRM1-205ENST00000409057 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
PBRM1-205ENST00000409057 WASHC2AQ641Q2 1341 aa13.16□□□□□ -0.3
PBRM1-205ENST00000409057 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
PBRM1-205ENST00000409057 COG3Q96JB2 828 aa13.15□□□□□ -0.3
PBRM1-205ENST00000409057 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
PBRM1-205ENST00000409057 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
PBRM1-205ENST00000409057 AAMPQ13685 434 aa13.15□□□□□ -0.3
PBRM1-205ENST00000409057 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
PBRM1-205ENST00000409057 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
PBRM1-205ENST00000409057 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
PBRM1-205ENST00000409057 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
PBRM1-205ENST00000409057 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
PBRM1-205ENST00000409057 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
PBRM1-205ENST00000409057 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
PBRM1-205ENST00000409057 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
PBRM1-205ENST00000409057 GOLGA6L19H0YKK7 550 aa13.14□□□□□ -0.31
PBRM1-205ENST00000409057 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
PBRM1-205ENST00000409057 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms