RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 MKRN3Q13064 507 aaKnown RBP2.19□□□□□ -2.06
MIR548F3-201ENST00000408509 NBPF11Q86T75 865 aa2.19□□□□□ -2.06
MIR548F3-201ENST00000408509 AXIN1O15169 862 aa2.18□□□□□ -2.06
MIR548F3-201ENST00000408509 WDR26Q9H7D7 661 aa2.18□□□□□ -2.06
MIR548F3-201ENST00000408509 NXF1Q9UBU9 619 aaKnown RBP2.18□□□□□ -2.06
MIR548F3-201ENST00000408509 TNFRSF10AO00220 468 aa2.17□□□□□ -2.06
MIR548F3-201ENST00000408509 COL9A1P20849 921 aa2.17□□□□□ -2.06
MIR548F3-201ENST00000408509 GOLGA2Q08379 1002 aa2.17□□□□□ -2.06
MIR548F3-201ENST00000408509 KANK3Q6NY19 840 aa2.17□□□□□ -2.06
MIR548F3-201ENST00000408509 VPS9D1Q9Y2B5 631 aa2.17□□□□□ -2.06
MIR548F3-201ENST00000408509 AVENQ9NQS1 362 aaPredicted RBP2.16□□□□□ -2.06
MIR548F3-201ENST00000408509 BAG6P46379 1132 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 PRR20EP86478 221 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 PRR20CP86479 221 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 PRR20DP86480 221 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 PRR20BP86481 221 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 PRR20AP86496 221 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 CRIPAKQ8N1N5 446 aa2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 MRPL50Q8N5N7 158 aaKnown RBP2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.15□□□□□ -2.07
MIR548F3-201ENST00000408509 PAX4O43316 350 aa2.14□□□□□ -2.07
MIR548F3-201ENST00000408509 ITGB2P05107 769 aa2.14□□□□□ -2.07
MIR548F3-201ENST00000408509 RASEFQ8IZ41 740 aa2.13□□□□□ -2.07
MIR548F3-201ENST00000408509 TRIM47Q96LD4 638 aa2.12□□□□□ -2.07
MIR548F3-201ENST00000408509 H3BM21 787 aa2.11□□□□□ -2.07
MIR548F3-201ENST00000408509 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
MIR548F3-201ENST00000408509 BCAMP50895 628 aa2.11□□□□□ -2.07
MIR548F3-201ENST00000408509 TMEM92Q6UXU6 159 aa2.11□□□□□ -2.07
MIR548F3-201ENST00000408509 ZFP64Q9NPA5 681 aa2.11□□□□□ -2.07
MIR548F3-201ENST00000408509 JAG1P78504 1218 aa2.09□□□□□ -2.07
MIR548F3-201ENST00000408509 NYAP1Q6ZVC0 841 aa2.09□□□□□ -2.07
MIR548F3-201ENST00000408509 KCNK17Q96T54 332 aa2.09□□□□□ -2.07
MIR548F3-201ENST00000408509 SENP2Q9HC62 589 aa2.09□□□□□ -2.07
MIR548F3-201ENST00000408509 BHMG1C9JSJ3 638 aaPredicted RBP2.08□□□□□ -2.08
MIR548F3-201ENST00000408509 MARSP56192 900 aaKnown RBP2.08□□□□□ -2.08
MIR548F3-201ENST00000408509 MCTP1Q6DN14 999 aa2.08□□□□□ -2.08
MIR548F3-201ENST00000408509 NPAS3Q8IXF0 933 aa2.08□□□□□ -2.08
MIR548F3-201ENST00000408509 ATP13A2Q9NQ11 1180 aa2.08□□□□□ -2.08
MIR548F3-201ENST00000408509 SLC19A1P41440 591 aa2.07□□□□□ -2.08
MIR548F3-201ENST00000408509 ANKK1Q8NFD2 765 aa2.07□□□□□ -2.08
MIR548F3-201ENST00000408509 KCNH8Q96L42 1107 aa2.07□□□□□ -2.08
MIR548F3-201ENST00000408509 ITGB7P26010 798 aa2.06□□□□□ -2.08
MIR548F3-201ENST00000408509 ARTNQ5T4W7 220 aa2.06□□□□□ -2.08
MIR548F3-201ENST00000408509 ZNF598Q86UK7 904 aaKnown RBP2.06□□□□□ -2.08
MIR548F3-201ENST00000408509 DCAF5Q96JK2 942 aa2.06□□□□□ -2.08
MIR548F3-201ENST00000408509 FMNL2Q96PY5 1086 aa2.06□□□□□ -2.08
MIR548F3-201ENST00000408509 KRTAP9-7A8MTY7 169 aa2.05□□□□□ -2.08
MIR548F3-201ENST00000408509 GDF9O60383 454 aa2.05□□□□□ -2.08
MIR548F3-201ENST00000408509 CTC1Q2NKJ3 1217 aa2.05□□□□□ -2.08
MIR548F3-201ENST00000408509 PSDA5PKW4 1024 aaPredicted RBP2.04□□□□□ -2.08
MIR548F3-201ENST00000408509 AVPP01185 164 aa2.04□□□□□ -2.08
MIR548F3-201ENST00000408509 ZNF697Q5TEC3 545 aa2.04□□□□□ -2.08
MIR548F3-201ENST00000408509 SCARF2Q96GP6 870 aaPredicted RBP2.04□□□□□ -2.08
MIR548F3-201ENST00000408509 SPRYD7Q5W111 196 aa2.03□□□□□ -2.08
MIR548F3-201ENST00000408509 KIFC2Q96AC6 838 aa2.03□□□□□ -2.08
MIR548F3-201ENST00000408509 SMCPP49901 116 aaPredicted RBP2.01□□□□□ -2.09
MIR548F3-201ENST00000408509 FOXD4L6Q3SYB3 417 aaPredicted RBP2.01□□□□□ -2.09
MIR548F3-201ENST00000408509 FOXD4L3Q6VB84 417 aaPredicted RBP2.01□□□□□ -2.09
MIR548F3-201ENST00000408509 SVOPQ8N4V2 548 aa2.01□□□□□ -2.09
MIR548F3-201ENST00000408509 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
MIR548F3-201ENST00000408509 SEMA6BQ9H3T3 888 aa2.01□□□□□ -2.09
MIR548F3-201ENST00000408509 SOWAHBA6NEL2 793 aa2□□□□□ -2.09
MIR548F3-201ENST00000408509 GGCXP38435 758 aa2□□□□□ -2.09
MIR548F3-201ENST00000408509 COL9A3Q14050 684 aaPredicted RBP2□□□□□ -2.09
MIR548F3-201ENST00000408509 ILDR1Q86SU0 546 aaPredicted RBP2□□□□□ -2.09
MIR548F3-201ENST00000408509 TJAP1Q5JTD0 557 aa1.99□□□□□ -2.09
MIR548F3-201ENST00000408509 EMID1Q96A84 441 aaPredicted RBP1.99□□□□□ -2.09
MIR548F3-201ENST00000408509 NBPF3Q9H094 633 aa1.99□□□□□ -2.09
MIR548F3-201ENST00000408509 PCDHB8Q9UN66 801 aa1.99□□□□□ -2.09
MIR548F3-201ENST00000408509 JAG2Q9Y219 1238 aa1.99□□□□□ -2.09
MIR548F3-201ENST00000408509 PPP4R3BQ5MIZ7 849 aa1.97□□□□□ -2.09
MIR548F3-201ENST00000408509 ZNF385CQ66K41 422 aaPredicted RBP1.97□□□□□ -2.09
MIR548F3-201ENST00000408509 PCDHGA4Q9Y5G9 962 aa1.97□□□□□ -2.09
MIR548F3-201ENST00000408509 FOXC1Q12948 553 aa1.96□□□□□ -2.1
MIR548F3-201ENST00000408509 SLC4A5Q9BY07 1137 aa1.96□□□□□ -2.1
MIR548F3-201ENST00000408509 NKX2-3Q8TAU0 364 aa1.95□□□□□ -2.1
MIR548F3-201ENST00000408509 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
MIR548F3-201ENST00000408509 ZNF516Q92618 1163 aa1.94□□□□□ -2.1
MIR548F3-201ENST00000408509 RNF114Q9Y508 228 aa1.94□□□□□ -2.1
MIR548F3-201ENST00000408509 VSIG8P0DPA2 414 aa1.93□□□□□ -2.1
MIR548F3-201ENST00000408509 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
MIR548F3-201ENST00000408509 MTRQ99707 1265 aa1.93□□□□□ -2.1
MIR548F3-201ENST00000408509 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
MIR548F3-201ENST00000408509 IL21Q9HBE4 155 aa1.93□□□□□ -2.1
MIR548F3-201ENST00000408509 COL17A1Q9UMD9 1497 aaPredicted RBP1.93□□□□□ -2.1
MIR548F3-201ENST00000408509 ARHGEF15O94989 841 aa1.92□□□□□ -2.1
MIR548F3-201ENST00000408509 FBLN7Q53RD9 439 aa1.92□□□□□ -2.1
MIR548F3-201ENST00000408509 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
MIR548F3-201ENST00000408509 WHAMMQ8TF30 809 aa1.92□□□□□ -2.1
MIR548F3-201ENST00000408509 PRRG2O14669 202 aa1.91□□□□□ -2.1
MIR548F3-201ENST00000408509 CNTNAP3BQ96NU0 1288 aa1.91□□□□□ -2.1
MIR548F3-201ENST00000408509 CNTNAP3Q9BZ76 1288 aa1.91□□□□□ -2.1
MIR548F3-201ENST00000408509 HPS5Q9UPZ3 1129 aa1.91□□□□□ -2.1
MIR548F3-201ENST00000408509 NCANO14594 1321 aa1.91□□□□□ -2.1
MIR548F3-201ENST00000408509 BUD31P41223 144 aaPredicted RBP1.9□□□□□ -2.11
MIR548F3-201ENST00000408509 LIAT1Q6ZQX7 453 aa1.9□□□□□ -2.11
MIR548F3-201ENST00000408509 MICALL2Q8IY33 904 aa1.9□□□□□ -2.11
MIR548F3-201ENST00000408509 CSRNP1Q96S65 589 aa1.9□□□□□ -2.11
MIR548F3-201ENST00000408509 ZBED2Q9BTP6 218 aa1.9□□□□□ -2.11
MIR548F3-201ENST00000408509 TMUB1Q9BVT8 246 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms