RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 ATP10AO60312 1499 aa23.15■■□□□ 1.3
PIKFYVE-204ENST00000407449 PLA2R1Q13018 1463 aa23.15■■□□□ 1.3
PIKFYVE-204ENST00000407449 ATP7AQ04656 1500 aa23.15■■□□□ 1.3
PIKFYVE-204ENST00000407449 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.29
PIKFYVE-204ENST00000407449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.299e-9■■□□□ 12.6
PIKFYVE-204ENST00000407449 DEPDC5O75140 1603 aa23.14■■□□□ 1.29
PIKFYVE-204ENST00000407449 ZNF326Q5BKZ1 582 aaKnown RBP23.13■■□□□ 1.29
PIKFYVE-204ENST00000407449 ADGRL1O94910 1474 aa23.12■■□□□ 1.29
PIKFYVE-204ENST00000407449 KIF7Q2M1P5 1343 aa23.11■■□□□ 1.29
PIKFYVE-204ENST00000407449 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
PIKFYVE-204ENST00000407449 AFAP1Q8N556 730 aa23.09■■□□□ 1.29
PIKFYVE-204ENST00000407449 CFAP74Q9C0B2 1584 aa23.09■■□□□ 1.29
PIKFYVE-204ENST00000407449 EIF2AK4Q9P2K8 1649 aaKnown RBP23.09■■□□□ 1.29
PIKFYVE-204ENST00000407449 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
PIKFYVE-204ENST00000407449 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.28
PIKFYVE-204ENST00000407449 NPM1P06748 294 aaKnown RBP eCLIP23.07■■□□□ 1.28
PIKFYVE-204ENST00000407449 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
PIKFYVE-204ENST00000407449 E9PCH4 1651 aa23.06■■□□□ 1.28
PIKFYVE-204ENST00000407449 PRAG1Q86YV5 1406 aa23.05■■□□□ 1.28
PIKFYVE-204ENST00000407449 ARID4BQ4LE39 1312 aaPredicted RBP23.05■■□□□ 1.28
PIKFYVE-204ENST00000407449 A2MP01023 1474 aa23.05■■□□□ 1.28
PIKFYVE-204ENST00000407449 TET3O43151 1660 aa23.04■■□□□ 1.28
PIKFYVE-204ENST00000407449 CARD11Q9BXL7 1154 aa23.03■■□□□ 1.28
PIKFYVE-204ENST00000407449 KDM2AQ9Y2K7 1162 aa23.03■■□□□ 1.28
PIKFYVE-204ENST00000407449 LAMC1P11047 1609 aa23.03■■□□□ 1.28
PIKFYVE-204ENST00000407449 VWDEQ8N2E2 1590 aa23.03■■□□□ 1.28
PIKFYVE-204ENST00000407449 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
PIKFYVE-204ENST00000407449 TRPM2O94759 1503 aa23.01■■□□□ 1.27
PIKFYVE-204ENST00000407449 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
PIKFYVE-204ENST00000407449 KIDINS220Q9ULH0 1771 aa23■■□□□ 1.27
PIKFYVE-204ENST00000407449 ZNF518AQ6AHZ1 1483 aa22.99■■□□□ 1.27
PIKFYVE-204ENST00000407449 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
PIKFYVE-204ENST00000407449 CEP152O94986 1710 aa22.98■■□□□ 1.27
PIKFYVE-204ENST00000407449 DHX29Q7Z478 1369 aaKnown RBP22.98■■□□□ 1.27
PIKFYVE-204ENST00000407449 KANK1Q14678 1352 aa22.97■■□□□ 1.27
PIKFYVE-204ENST00000407449 MROH1Q8NDA8 1641 aa22.97■■□□□ 1.27
PIKFYVE-204ENST00000407449 CD109Q6YHK3 1445 aa22.96■■□□□ 1.27
PIKFYVE-204ENST00000407449 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
PIKFYVE-204ENST00000407449 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
PIKFYVE-204ENST00000407449 PTPRTO14522 1441 aa22.96■■□□□ 1.27
PIKFYVE-204ENST00000407449 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
PIKFYVE-204ENST00000407449 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
PIKFYVE-204ENST00000407449 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
PIKFYVE-204ENST00000407449 POGZQ7Z3K3 1410 aa22.92■■□□□ 1.26
PIKFYVE-204ENST00000407449 MYT1LQ9UL68 1186 aa22.91■■□□□ 1.26
PIKFYVE-204ENST00000407449 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
PIKFYVE-204ENST00000407449 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.25
PIKFYVE-204ENST00000407449 NEURL4Q96JN8 1562 aa22.88■■□□□ 1.25
PIKFYVE-204ENST00000407449 KIF3BO15066 747 aa22.88■■□□□ 1.25
PIKFYVE-204ENST00000407449 MADDQ8WXG6 1647 aa22.88■■□□□ 1.25
PIKFYVE-204ENST00000407449 MLH3Q9UHC1 1453 aa22.88■■□□□ 1.25
PIKFYVE-204ENST00000407449 EFCAB6Q5THR3 1501 aa22.87■■□□□ 1.25
PIKFYVE-204ENST00000407449 NEO1Q92859 1461 aa22.87■■□□□ 1.25
PIKFYVE-204ENST00000407449 LMTK2Q8IWU2 1503 aa22.86■■□□□ 1.25
PIKFYVE-204ENST00000407449 POLR3GLQ9BT43 218 aa22.83■■□□□ 1.25
PIKFYVE-204ENST00000407449 NBPF1Q3BBV0 1214 aa22.83■■□□□ 1.24
PIKFYVE-204ENST00000407449 PPRC1Q5VV67 1664 aaKnown RBP22.83■■□□□ 1.24
PIKFYVE-204ENST00000407449 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
PIKFYVE-204ENST00000407449 SUPT16HQ9Y5B9 1047 aaKnown RBP22.82■■□□□ 1.24
PIKFYVE-204ENST00000407449 STAC3Q96MF2 364 aa22.81■■□□□ 1.24
PIKFYVE-204ENST00000407449 ABCA6Q8N139 1617 aa22.81■■□□□ 1.24
PIKFYVE-204ENST00000407449 MAP3K4Q9Y6R4 1608 aa22.8■■□□□ 1.24
PIKFYVE-204ENST00000407449 CCDC184Q52MB2 194 aa22.8■■□□□ 1.24
PIKFYVE-204ENST00000407449 COL17A1Q9UMD9 1497 aaPredicted RBP22.79■■□□□ 1.24
PIKFYVE-204ENST00000407449 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
PIKFYVE-204ENST00000407449 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
PIKFYVE-204ENST00000407449 IQGAP1P46940 1657 aa22.79■■□□□ 1.24
PIKFYVE-204ENST00000407449 KIF1BO60333 1816 aa22.78■■□□□ 1.24
PIKFYVE-204ENST00000407449 KIAA1210Q9ULL0 1709 aa22.77■■□□□ 1.24
PIKFYVE-204ENST00000407449 GLI2P10070 1586 aa22.76■■□□□ 1.23
PIKFYVE-204ENST00000407449 RICTORQ6R327 1708 aa22.74■■□□□ 1.23
PIKFYVE-204ENST00000407449 RIMBP3CA6NJZ7 1639 aa22.73■■□□□ 1.23
PIKFYVE-204ENST00000407449 RIMBP3BA6NNM3 1639 aa22.73■■□□□ 1.23
PIKFYVE-204ENST00000407449 RIMBP3Q9UFD9 1639 aa22.73■■□□□ 1.23
PIKFYVE-204ENST00000407449 IFT172Q9UG01 1749 aa22.73■■□□□ 1.23
PIKFYVE-204ENST00000407449 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
PIKFYVE-204ENST00000407449 MYOM2P54296 1465 aa22.72■■□□□ 1.23
PIKFYVE-204ENST00000407449 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
PIKFYVE-204ENST00000407449 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
PIKFYVE-204ENST00000407449 TESK2Q96S53 571 aa22.71■■□□□ 1.23
PIKFYVE-204ENST00000407449 MROH2AA6NES4 1674 aa22.7■■□□□ 1.22
PIKFYVE-204ENST00000407449 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
PIKFYVE-204ENST00000407449 DISP3Q9P2K9 1392 aa22.68■■□□□ 1.22
PIKFYVE-204ENST00000407449 ABCC3O15438 1527 aa22.67■■□□□ 1.22
PIKFYVE-204ENST00000407449 SCAF11Q99590 1463 aaKnown RBP22.67■■□□□ 1.22
PIKFYVE-204ENST00000407449 ADGRB3O60242 1522 aa22.67■■□□□ 1.22
PIKFYVE-204ENST00000407449 CAMSAP1Q5T5Y3 1602 aa22.66■■□□□ 1.22
PIKFYVE-204ENST00000407449 TMF1P82094 1093 aa22.65■■□□□ 1.22
PIKFYVE-204ENST00000407449 NPATQ14207 1427 aa22.65■■□□□ 1.22
PIKFYVE-204ENST00000407449 NEFLP07196 543 aa22.64■■□□□ 1.21
PIKFYVE-204ENST00000407449 RALBP1Q15311 655 aa22.64■■□□□ 1.21
PIKFYVE-204ENST00000407449 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.21
PIKFYVE-204ENST00000407449 ZBED9Q6R2W3 1325 aa22.63■■□□□ 1.21
PIKFYVE-204ENST00000407449 CYB5RLQ6IPT4 315 aa22.63■■□□□ 1.21
PIKFYVE-204ENST00000407449 ZC3H13Q5T200 1668 aaKnown RBP22.63■■□□□ 1.21
PIKFYVE-204ENST00000407449 DIP2BQ9P265 1576 aa22.62■■□□□ 1.21
PIKFYVE-204ENST00000407449 RAPGEF3O95398 923 aa22.62■■□□□ 1.21
PIKFYVE-204ENST00000407449 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
PIKFYVE-204ENST00000407449 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
PIKFYVE-204ENST00000407449 FKBP8Q14318 412 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms