RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
CDK11B-204ENST00000407249 CCDC7Q96M83 1385 aa22.24■■□□□ 1.15
CDK11B-204ENST00000407249 KIF15Q9NS87 1388 aa22.24■■□□□ 1.15
CDK11B-204ENST00000407249 SYCP2Q9BX26 1530 aa22.23■■□□□ 1.15
CDK11B-204ENST00000407249 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
CDK11B-204ENST00000407249 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
CDK11B-204ENST00000407249 PLCH2O75038 1416 aa22.22■■□□□ 1.15
CDK11B-204ENST00000407249 HNRNPMP52272 730 aaKnown RBP eCLIP22.21■■□□□ 1.15
CDK11B-204ENST00000407249 ZBED9Q6R2W3 1325 aa22.21■■□□□ 1.15
CDK11B-204ENST00000407249 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
CDK11B-204ENST00000407249 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
CDK11B-204ENST00000407249 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
CDK11B-204ENST00000407249 FOXD1Q16676 465 aa22.15■■□□□ 1.14
CDK11B-204ENST00000407249 NUP155O75694 1391 aa22.14■■□□□ 1.14
CDK11B-204ENST00000407249 ABCC1P33527 1531 aa22.14■■□□□ 1.13
CDK11B-204ENST00000407249 UNC13BO14795 1591 aa22.14■■□□□ 1.13
CDK11B-204ENST00000407249 FGD1P98174 961 aa22.14■■□□□ 1.13
CDK11B-204ENST00000407249 NBPF8Q3BBV2 869 aa22.13■■□□□ 1.13
CDK11B-204ENST00000407249 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
CDK11B-204ENST00000407249 WDR7Q9Y4E6 1490 aa22.13■■□□□ 1.13
CDK11B-204ENST00000407249 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
CDK11B-204ENST00000407249 SPATA31E1Q6ZUB1 1445 aa22.12■■□□□ 1.13
CDK11B-204ENST00000407249 PKD2Q13563 968 aa22.11■■□□□ 1.13
CDK11B-204ENST00000407249 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
CDK11B-204ENST00000407249 KIF7Q2M1P5 1343 aa22.1■■□□□ 1.13
CDK11B-204ENST00000407249 GLIPR1L2Q4G1C9 344 aa22.09■■□□□ 1.13
CDK11B-204ENST00000407249 ARXQ96QS3 562 aa22.09■■□□□ 1.13
CDK11B-204ENST00000407249 ZMYND15Q9H091 742 aa22.09■■□□□ 1.13
CDK11B-204ENST00000407249 ERBINQ96RT1 1412 aa22.07■■□□□ 1.12
CDK11B-204ENST00000407249 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
CDK11B-204ENST00000407249 ARHGEF12Q9NZN5 1544 aa22.07■■□□□ 1.12
CDK11B-204ENST00000407249 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
CDK11B-204ENST00000407249 IL27Q8NEV9 243 aa22.06■■□□□ 1.12
CDK11B-204ENST00000407249 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
CDK11B-204ENST00000407249 IQGAP3Q86VI3 1631 aa22.04■■□□□ 1.12
CDK11B-204ENST00000407249 RTEL1-TNFRSF6BF6WH68 1400 aa22.04■■□□□ 1.12
CDK11B-204ENST00000407249 MAGI2Q86UL8 1455 aa22.03■■□□□ 1.12
CDK11B-204ENST00000407249 POLR1AO95602 1720 aaPredicted RBP22■■□□□ 1.11
CDK11B-204ENST00000407249 UHRF1BP1Q6BDS2 1440 aa22■■□□□ 1.11
CDK11B-204ENST00000407249 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
CDK11B-204ENST00000407249 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
CDK11B-204ENST00000407249 RTN4Q9NQC3 1192 aaKnown RBP21.96■■□□□ 1.11
CDK11B-204ENST00000407249 ASXL2Q76L83 1435 aa21.96■■□□□ 1.11
CDK11B-204ENST00000407249 TRAPPC8Q9Y2L5 1435 aa21.96■■□□□ 1.11
CDK11B-204ENST00000407249 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
CDK11B-204ENST00000407249 FANCAO15360 1455 aa21.95■■□□□ 1.1
CDK11B-204ENST00000407249 RNF123Q5XPI4 1314 aa21.95■■□□□ 1.1
CDK11B-204ENST00000407249 AAMPQ13685 434 aa21.94■■□□□ 1.1
CDK11B-204ENST00000407249 NUDCQ9Y266 331 aa21.93■■□□□ 1.1
CDK11B-204ENST00000407249 RALGAPBQ86X10 1494 aa21.93■■□□□ 1.1
CDK11B-204ENST00000407249 BCL11BQ9C0K0 894 aaPredicted RBP21.93■■□□□ 1.1
CDK11B-204ENST00000407249 INO80Q9ULG1 1556 aaPredicted RBP21.92■■□□□ 1.1
CDK11B-204ENST00000407249 A0A0U1RQG5 324 aaPredicted RBP21.92■■□□□ 1.1
CDK11B-204ENST00000407249 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
CDK11B-204ENST00000407249 ATP10AO60312 1499 aa21.91■■□□□ 1.1
CDK11B-204ENST00000407249 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
CDK11B-204ENST00000407249 NOP58Q9Y2X3 529 aaKnown RBP21.91■■□□□ 1.1
CDK11B-204ENST00000407249 CFAP74Q9C0B2 1584 aa21.9■■□□□ 1.1
CDK11B-204ENST00000407249 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.1
CDK11B-204ENST00000407249 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.1
CDK11B-204ENST00000407249 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
CDK11B-204ENST00000407249 DEPDC5O75140 1603 aa21.87■■□□□ 1.09
CDK11B-204ENST00000407249 ADGRL1O94910 1474 aa21.87■■□□□ 1.09
CDK11B-204ENST00000407249 USP47Q96K76 1375 aa21.87■■□□□ 1.09
CDK11B-204ENST00000407249 EIF2AK4Q9P2K8 1649 aaKnown RBP21.86■■□□□ 1.09
CDK11B-204ENST00000407249 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
CDK11B-204ENST00000407249 ARID4BQ4LE39 1312 aaPredicted RBP21.85■■□□□ 1.09
CDK11B-204ENST00000407249 KDM5CP41229 1560 aa21.85■■□□□ 1.09
CDK11B-204ENST00000407249 RBM10P98175 930 aaKnown RBP21.85■■□□□ 1.09
CDK11B-204ENST00000407249 PAK3O75914 559 aaPredicted RBP21.84■■□□□ 1.09
CDK11B-204ENST00000407249 BCORL1Q5H9F3 1711 aa21.84■■□□□ 1.09
CDK11B-204ENST00000407249 PLA2R1Q13018 1463 aa21.83■■□□□ 1.08
CDK11B-204ENST00000407249 PNISRQ8TF01 805 aaKnown RBP21.82■■□□□ 1.08
CDK11B-204ENST00000407249 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
CDK11B-204ENST00000407249 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
CDK11B-204ENST00000407249 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
CDK11B-204ENST00000407249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.089e-7■■■■□ 20.5
CDK11B-204ENST00000407249 TAF7LQ5H9L4 462 aa21.79■■□□□ 1.08
CDK11B-204ENST00000407249 AFAP1Q8N556 730 aa21.79■■□□□ 1.08
CDK11B-204ENST00000407249 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
CDK11B-204ENST00000407249 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
CDK11B-204ENST00000407249 VWDEQ8N2E2 1590 aa21.78■■□□□ 1.08
CDK11B-204ENST00000407249 TET3O43151 1660 aa21.78■■□□□ 1.08
CDK11B-204ENST00000407249 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
CDK11B-204ENST00000407249 IPO9Q96P70 1041 aaKnown RBP21.77■■□□□ 1.08
CDK11B-204ENST00000407249 LAMC1P11047 1609 aa21.77■■□□□ 1.07
CDK11B-204ENST00000407249 ANP32AP39687 249 aaKnown RBP21.76■■□□□ 1.07
CDK11B-204ENST00000407249 TMC1Q8TDI8 760 aa21.76■■□□□ 1.07
CDK11B-204ENST00000407249 KANK1Q14678 1352 aa21.76■■□□□ 1.07
CDK11B-204ENST00000407249 TRPM1Q7Z4N2 1603 aa21.75■■□□□ 1.07
CDK11B-204ENST00000407249 NBR1Q14596 966 aa21.75■■□□□ 1.07
CDK11B-204ENST00000407249 PRDM15P57071 1507 aaPredicted RBP21.75■■□□□ 1.07
CDK11B-204ENST00000407249 PRAG1Q86YV5 1406 aa21.75■■□□□ 1.07
CDK11B-204ENST00000407249 E9PCH4 1651 aa21.75■■□□□ 1.07
CDK11B-204ENST00000407249 TRPM2O94759 1503 aa21.75■■□□□ 1.07
CDK11B-204ENST00000407249 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
CDK11B-204ENST00000407249 CD109Q6YHK3 1445 aa21.74■■□□□ 1.07
CDK11B-204ENST00000407249 A2MP01023 1474 aa21.73■■□□□ 1.07
CDK11B-204ENST00000407249 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
CDK11B-204ENST00000407249 KIDINS220Q9ULH0 1771 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms