RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
NUP50-203ENST00000407019 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
NUP50-203ENST00000407019 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
NUP50-203ENST00000407019 IQGAP3Q86VI3 1631 aa23.13■■□□□ 1.29
NUP50-203ENST00000407019 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
NUP50-203ENST00000407019 TSHZ2Q9NRE2 1034 aa23.12■■□□□ 1.29
NUP50-203ENST00000407019 POLR3GLQ9BT43 218 aa23.12■■□□□ 1.29
NUP50-203ENST00000407019 ERBINQ96RT1 1412 aa23.1■■□□□ 1.29
NUP50-203ENST00000407019 ABCC1P33527 1531 aa23.09■■□□□ 1.29
NUP50-203ENST00000407019 EFCAB2Q5VUJ9 269 aa23.09■■□□□ 1.29
NUP50-203ENST00000407019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.08■■□□□ 1.292e-6■■■□□ 16.3
NUP50-203ENST00000407019 PLA2R1Q13018 1463 aa23.08■■□□□ 1.28
NUP50-203ENST00000407019 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.28
NUP50-203ENST00000407019 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
NUP50-203ENST00000407019 PRAG1Q86YV5 1406 aa23.06■■□□□ 1.28
NUP50-203ENST00000407019 TRPM1Q7Z4N2 1603 aa23.05■■□□□ 1.28
NUP50-203ENST00000407019 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
NUP50-203ENST00000407019 A2MP01023 1474 aa23.02■■□□□ 1.28
NUP50-203ENST00000407019 ATP10AO60312 1499 aa23.01■■□□□ 1.27
NUP50-203ENST00000407019 ARAP3Q8WWN8 1544 aa23.01■■□□□ 1.27
NUP50-203ENST00000407019 TRAPPC8Q9Y2L5 1435 aa23■■□□□ 1.27
NUP50-203ENST00000407019 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
NUP50-203ENST00000407019 GPRASP1Q5JY77 1395 aa22.97■■□□□ 1.27
NUP50-203ENST00000407019 LAMC1P11047 1609 aa22.97■■□□□ 1.27
NUP50-203ENST00000407019 E9PCH4 1651 aa22.97■■□□□ 1.27
NUP50-203ENST00000407019 EIF2AK4Q9P2K8 1649 aaKnown RBP22.96■■□□□ 1.27
NUP50-203ENST00000407019 CNGB1Q14028 1251 aaPredicted RBP22.96■■□□□ 1.27
NUP50-203ENST00000407019 RTEL1-TNFRSF6BF6WH68 1400 aa22.95■■□□□ 1.26
NUP50-203ENST00000407019 ERICH6BQ5W0A0 696 aa22.93■■□□□ 1.26
NUP50-203ENST00000407019 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
NUP50-203ENST00000407019 ZFYVE16Q7Z3T8 1539 aa22.93■■□□□ 1.26
NUP50-203ENST00000407019 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
NUP50-203ENST00000407019 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
NUP50-203ENST00000407019 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
NUP50-203ENST00000407019 IRX6P78412 446 aaPredicted RBP22.91■■□□□ 1.26
NUP50-203ENST00000407019 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
NUP50-203ENST00000407019 ABCA9Q8IUA7 1624 aa22.87■■□□□ 1.25
NUP50-203ENST00000407019 RALBP1Q15311 655 aa22.87■■□□□ 1.25
NUP50-203ENST00000407019 TMC1Q8TDI8 760 aa22.87■■□□□ 1.25
NUP50-203ENST00000407019 COL17A1Q9UMD9 1497 aaPredicted RBP22.87■■□□□ 1.25
NUP50-203ENST00000407019 MYBBP1AQ9BQG0 1328 aaKnown RBP22.86■■□□□ 1.25
NUP50-203ENST00000407019 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
NUP50-203ENST00000407019 PNISRQ8TF01 805 aaKnown RBP22.86■■□□□ 1.25
NUP50-203ENST00000407019 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
NUP50-203ENST00000407019 FANCAO15360 1455 aa22.85■■□□□ 1.25
NUP50-203ENST00000407019 SMG6Q86US8 1419 aaKnown RBP22.85■■□□□ 1.25
NUP50-203ENST00000407019 DEPDC5O75140 1603 aa22.84■■□□□ 1.25
NUP50-203ENST00000407019 RNF17Q9BXT8 1623 aaKnown RBP22.84■■□□□ 1.25
NUP50-203ENST00000407019 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
NUP50-203ENST00000407019 TRPM2O94759 1503 aa22.84■■□□□ 1.25
NUP50-203ENST00000407019 ATP7AQ04656 1500 aa22.83■■□□□ 1.25
NUP50-203ENST00000407019 PPP4R2Q9NY27 417 aa22.81■■□□□ 1.24
NUP50-203ENST00000407019 TESK2Q96S53 571 aa22.8■■□□□ 1.24
NUP50-203ENST00000407019 LRPPRCP42704 1394 aaKnown RBP22.8■■□□□ 1.24
NUP50-203ENST00000407019 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
NUP50-203ENST00000407019 PTPRTO14522 1441 aa22.79■■□□□ 1.24
NUP50-203ENST00000407019 TET3O43151 1660 aa22.79■■□□□ 1.24
NUP50-203ENST00000407019 DISP3Q9P2K9 1392 aa22.79■■□□□ 1.24
NUP50-203ENST00000407019 MADDQ8WXG6 1647 aa22.78■■□□□ 1.24
NUP50-203ENST00000407019 PARD3Q8TEW0 1356 aa22.78■■□□□ 1.24
NUP50-203ENST00000407019 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
NUP50-203ENST00000407019 CEP152O94986 1710 aa22.78■■□□□ 1.24
NUP50-203ENST00000407019 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
NUP50-203ENST00000407019 KANK1Q14678 1352 aa22.77■■□□□ 1.24
NUP50-203ENST00000407019 MYT1Q01538 1121 aa22.76■■□□□ 1.23
NUP50-203ENST00000407019 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
NUP50-203ENST00000407019 TMF1P82094 1093 aa22.75■■□□□ 1.23
NUP50-203ENST00000407019 CLTCL1P53675 1640 aa22.75■■□□□ 1.23
NUP50-203ENST00000407019 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
NUP50-203ENST00000407019 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
NUP50-203ENST00000407019 PER1O15534 1290 aaPredicted RBP22.73■■□□□ 1.23
NUP50-203ENST00000407019 NLRP13Q86W25 1043 aa22.73■■□□□ 1.23
NUP50-203ENST00000407019 STAC3Q96MF2 364 aa22.73■■□□□ 1.23
NUP50-203ENST00000407019 WASHC2CQ9Y4E1 1318 aa22.73■■□□□ 1.23
NUP50-203ENST00000407019 RBM19Q9Y4C8 960 aaKnown RBP22.72■■□□□ 1.23
NUP50-203ENST00000407019 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
NUP50-203ENST00000407019 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
NUP50-203ENST00000407019 KIF3BO15066 747 aa22.69■■□□□ 1.22
NUP50-203ENST00000407019 MROH1Q8NDA8 1641 aa22.68■■□□□ 1.22
NUP50-203ENST00000407019 PANK3Q9H999 370 aa22.67■■□□□ 1.22
NUP50-203ENST00000407019 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
NUP50-203ENST00000407019 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
NUP50-203ENST00000407019 SCAF11Q99590 1463 aaKnown RBP22.65■■□□□ 1.22
NUP50-203ENST00000407019 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
NUP50-203ENST00000407019 KIDINS220Q9ULH0 1771 aa22.62■■□□□ 1.21
NUP50-203ENST00000407019 SENP3-EIF4A1A0A087X0R7 540 aa22.62■■□□□ 1.21
NUP50-203ENST00000407019 B4GALNT3Q6L9W6 998 aa22.62■■□□□ 1.21
NUP50-203ENST00000407019 ZNF518AQ6AHZ1 1483 aa22.62■■□□□ 1.21
NUP50-203ENST00000407019 KIAA1210Q9ULL0 1709 aa22.61■■□□□ 1.21
NUP50-203ENST00000407019 EFCAB6Q5THR3 1501 aa22.61■■□□□ 1.21
NUP50-203ENST00000407019 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
NUP50-203ENST00000407019 INSRP06213 1382 aa22.59■■□□□ 1.21
NUP50-203ENST00000407019 ZMYM4Q5VZL5 1548 aa22.58■■□□□ 1.21
NUP50-203ENST00000407019 CFAP74Q9C0B2 1584 aa22.58■■□□□ 1.21
NUP50-203ENST00000407019 CDCA8Q53HL2 280 aa22.58■■□□□ 1.21
NUP50-203ENST00000407019 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
NUP50-203ENST00000407019 MYOM2P54296 1465 aa22.58■■□□□ 1.21
NUP50-203ENST00000407019 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
NUP50-203ENST00000407019 SYNMO15061 1565 aa22.57■■□□□ 1.2
NUP50-203ENST00000407019 PPRC1Q5VV67 1664 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms