RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 RAPGEF6Q8TEU7 1601 aa31.4■■■□□ 2.62
ESRRA-203ENST00000406310 IFT140Q96RY7 1462 aa31.38■■■□□ 2.61
ESRRA-203ENST00000406310 NUP153P49790 1475 aaKnown RBP31.37■■■□□ 2.61
ESRRA-203ENST00000406310 KIAA0556O60303 1618 aa31.36■■■□□ 2.61
ESRRA-203ENST00000406310 DAXXQ9UER7 740 aaPredicted RBP31.35■■■□□ 2.61
ESRRA-203ENST00000406310 KDM5DQ9BY66 1539 aa31.35■■■□□ 2.61
ESRRA-203ENST00000406310 SENP3-EIF4A1A0A087X0R7 540 aa31.34■■■□□ 2.61
ESRRA-203ENST00000406310 BLMP54132 1417 aaPredicted RBP31.34■■■□□ 2.61
ESRRA-203ENST00000406310 ST20-MTHFSA0A0A6YYL1 179 aa31.34■■■□□ 2.61
ESRRA-203ENST00000406310 ADCY10Q96PN6 1610 aa31.33■■■□□ 2.61
ESRRA-203ENST00000406310 TROQ12816 1431 aaPredicted RBP31.33■■■□□ 2.61
ESRRA-203ENST00000406310 NFKBIBQ15653 356 aa31.32■■■□□ 2.6
ESRRA-203ENST00000406310 ANKRD50Q9ULJ7 1429 aa31.32■■■□□ 2.6
ESRRA-203ENST00000406310 CEP170Q5SW79 1584 aa31.31■■■□□ 2.6
ESRRA-203ENST00000406310 CFDP1Q9UEE9 299 aaPredicted RBP31.3■■■□□ 2.6
ESRRA-203ENST00000406310 KIAA0586Q9BVV6 1533 aa31.3■■■□□ 2.6
ESRRA-203ENST00000406310 ARID3CA6NKF2 412 aa31.28■■■□□ 2.6
ESRRA-203ENST00000406310 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
ESRRA-203ENST00000406310 GPATCH8Q9UKJ3 1502 aaKnown RBP31.26■■■□□ 2.59
ESRRA-203ENST00000406310 CRBNQ96SW2 442 aa31.25■■■□□ 2.59
ESRRA-203ENST00000406310 CENPQQ7L2Z9 268 aaPredicted RBP31.25■■■□□ 2.59
ESRRA-203ENST00000406310 DISP1Q96F81 1524 aa31.23■■■□□ 2.59
ESRRA-203ENST00000406310 KDM2BQ8NHM5 1336 aa31.22■■■□□ 2.59
ESRRA-203ENST00000406310 CDCA7LQ96GN5 454 aa31.21■■■□□ 2.59
ESRRA-203ENST00000406310 BRPF3Q9ULD4 1205 aa31.21■■■□□ 2.59
ESRRA-203ENST00000406310 NUP155O75694 1391 aa31.2■■■□□ 2.59
ESRRA-203ENST00000406310 FAM161AQ3B820 660 aa31.2■■■□□ 2.58
ESRRA-203ENST00000406310 TRPM1Q7Z4N2 1603 aa31.19■■■□□ 2.58
ESRRA-203ENST00000406310 LAMC1P11047 1609 aa31.19■■■□□ 2.58
ESRRA-203ENST00000406310 FRAT1Q92837 279 aaPredicted RBP31.17■■■□□ 2.58
ESRRA-203ENST00000406310 PER1O15534 1290 aaPredicted RBP31.16■■■□□ 2.58
ESRRA-203ENST00000406310 PLIN1O60240 522 aa31.15■■■□□ 2.58
ESRRA-203ENST00000406310 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
ESRRA-203ENST00000406310 PTPRGP23470 1445 aa31.15■■■□□ 2.58
ESRRA-203ENST00000406310 PRG4Q92954 1404 aaPredicted RBP31.15■■■□□ 2.58
ESRRA-203ENST00000406310 UBE2Q2Q8WVN8 375 aa31.14■■■□□ 2.58
ESRRA-203ENST00000406310 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.13■■■□□ 2.57
ESRRA-203ENST00000406310 DCAF11Q8TEB1 546 aa31.13■■■□□ 2.57
ESRRA-203ENST00000406310 COL17A1Q9UMD9 1497 aaPredicted RBP31.13■■■□□ 2.57
ESRRA-203ENST00000406310 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.1■■■□□ 2.57
ESRRA-203ENST00000406310 KDM2AQ9Y2K7 1162 aa31.1■■■□□ 2.57
ESRRA-203ENST00000406310 CDC42BPAQ5VT25 1732 aa31.09■■■□□ 2.57
ESRRA-203ENST00000406310 PRAG1Q86YV5 1406 aa31.09■■■□□ 2.57
ESRRA-203ENST00000406310 GPRASP1Q5JY77 1395 aa31.09■■■□□ 2.57
ESRRA-203ENST00000406310 C9orf84Q5VXU9 1444 aa31.09■■■□□ 2.57
ESRRA-203ENST00000406310 FAM43AQ8N2R8 423 aa31.06■■■□□ 2.56
ESRRA-203ENST00000406310 C8orf34Q49A92 452 aa31.05■■■□□ 2.56
ESRRA-203ENST00000406310 RSPH6AQ9H0K4 717 aa31.05■■■□□ 2.56
ESRRA-203ENST00000406310 ZNF777Q9ULD5 760 aaPredicted RBP31.05■■■□□ 2.56
ESRRA-203ENST00000406310 FBLN2P98095 1184 aa31.04■■■□□ 2.56
ESRRA-203ENST00000406310 PRDM15P57071 1507 aaPredicted RBP31.03■■■□□ 2.56
ESRRA-203ENST00000406310 VIRMAQ69YN4 1812 aaKnown RBP31.02■■■□□ 2.56
ESRRA-203ENST00000406310 EIF2AK4Q9P2K8 1649 aaKnown RBP31.01■■■□□ 2.55
ESRRA-203ENST00000406310 EIF3AQ14152 1382 aaKnown RBP31■■■□□ 2.55
ESRRA-203ENST00000406310 SLC4A3P48751 1232 aa31■■■□□ 2.55
ESRRA-203ENST00000406310 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
ESRRA-203ENST00000406310 SKAP1Q86WV1 359 aa30.97■■■□□ 2.55
ESRRA-203ENST00000406310 C20orf194Q5TEA3 1177 aa30.97■■■□□ 2.55
ESRRA-203ENST00000406310 ARHGEF5Q12774 1597 aa30.96■■■□□ 2.55
ESRRA-203ENST00000406310 TSPY4P0CV99 314 aa30.96■■■□□ 2.55
ESRRA-203ENST00000406310 TSPY10P0CW01 314 aa30.96■■■□□ 2.55
ESRRA-203ENST00000406310 CC2D1BQ5T0F9 858 aaKnown RBP30.95■■■□□ 2.55
ESRRA-203ENST00000406310 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
ESRRA-203ENST00000406310 CCDC144AA2RUR9 1427 aa30.95■■■□□ 2.54
ESRRA-203ENST00000406310 FAM135AQ9P2D6 1515 aa30.94■■■□□ 2.54
ESRRA-203ENST00000406310 FRAT2O75474 233 aaPredicted RBP30.93■■■□□ 2.54
ESRRA-203ENST00000406310 ERBINQ96RT1 1412 aa30.93■■■□□ 2.54
ESRRA-203ENST00000406310 DUSP27Q5VZP5 1158 aa30.93■■■□□ 2.54
ESRRA-203ENST00000406310 PANK3Q9H999 370 aa30.91■■■□□ 2.54
ESRRA-203ENST00000406310 TMF1P82094 1093 aa30.9■■■□□ 2.54
ESRRA-203ENST00000406310 NUP160Q12769 1436 aa30.9■■■□□ 2.54
ESRRA-203ENST00000406310 TESK2Q96S53 571 aa30.89■■■□□ 2.54
ESRRA-203ENST00000406310 DISP3Q9P2K9 1392 aa30.89■■■□□ 2.54
ESRRA-203ENST00000406310 GOLGA2Q08379 1002 aa30.89■■■□□ 2.53
ESRRA-203ENST00000406310 GRIN2AQ12879 1464 aa30.88■■■□□ 2.53
ESRRA-203ENST00000406310 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
ESRRA-203ENST00000406310 ZNF521Q96K83 1311 aa30.88■■■□□ 2.53
ESRRA-203ENST00000406310 EIF5BO60841 1220 aaKnown RBP30.86■■■□□ 2.53
ESRRA-203ENST00000406310 WDR43Q15061 677 aaKnown RBP eCLIP30.86■■■□□ 2.53
ESRRA-203ENST00000406310 ADAMTS8Q9UP79 889 aa30.86■■■□□ 2.53
ESRRA-203ENST00000406310 PLB1Q6P1J6 1458 aa30.86■■■□□ 2.53
ESRRA-203ENST00000406310 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
ESRRA-203ENST00000406310 PLEKHH1Q9ULM0 1364 aa30.83■■■□□ 2.53
ESRRA-203ENST00000406310 A2MP01023 1474 aa30.83■■■□□ 2.53
ESRRA-203ENST00000406310 BECN1Q14457 450 aa30.83■■■□□ 2.53
ESRRA-203ENST00000406310 MYO5CQ9NQX4 1742 aa30.83■■■□□ 2.53
ESRRA-203ENST00000406310 CCDC141Q6ZP82 1450 aa30.82■■■□□ 2.53
ESRRA-203ENST00000406310 L1TD1Q5T7N2 865 aaKnown RBP30.82■■■□□ 2.52
ESRRA-203ENST00000406310 SYNJ2O15056 1496 aa30.81■■■□□ 2.52
ESRRA-203ENST00000406310 NBPF1Q3BBV0 1214 aa30.8■■■□□ 2.52
ESRRA-203ENST00000406310 PLEKHD1A6NEE1 506 aa30.79■■■□□ 2.52
ESRRA-203ENST00000406310 UNC13BO14795 1591 aa30.79■■■□□ 2.52
ESRRA-203ENST00000406310 RGS3P49796 1198 aa30.78■■■□□ 2.52
ESRRA-203ENST00000406310 RNF17Q9BXT8 1623 aaKnown RBP30.78■■■□□ 2.52
ESRRA-203ENST00000406310 CARMIL2Q6F5E8 1435 aa30.78■■■□□ 2.52
ESRRA-203ENST00000406310 SLFN5Q08AF3 891 aa30.77■■■□□ 2.52
ESRRA-203ENST00000406310 MAPK8IP3Q9UPT6 1336 aa30.77■■■□□ 2.52
ESRRA-203ENST00000406310 NINLQ9Y2I6 1382 aa30.77■■■□□ 2.52
ESRRA-203ENST00000406310 RSPH4AQ5TD94 716 aa30.75■■■□□ 2.51
ESRRA-203ENST00000406310 PIK3C2GO75747 1445 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms