RNA–Protein interactions for RNA: ENST00000405931.6

CPT1C-204, Transcript of carnitine palmitoyltransferase 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPT1C, Length 2,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-204ENST00000405931 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
CPT1C-204ENST00000405931 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
CPT1C-204ENST00000405931 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
CPT1C-204ENST00000405931 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.39
CPT1C-204ENST00000405931 PTPRGP23470 1445 aa17.51■□□□□ 0.39
CPT1C-204ENST00000405931 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
CPT1C-204ENST00000405931 PODXL2Q9NZ53 605 aa17.51■□□□□ 0.39
CPT1C-204ENST00000405931 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
CPT1C-204ENST00000405931 MBD5Q9P267 1494 aa17.51■□□□□ 0.39
CPT1C-204ENST00000405931 ABCA8O94911 1581 aa17.5■□□□□ 0.39
CPT1C-204ENST00000405931 ADCY10Q96PN6 1610 aa17.5■□□□□ 0.39
CPT1C-204ENST00000405931 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
CPT1C-204ENST00000405931 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
CPT1C-204ENST00000405931 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
CPT1C-204ENST00000405931 NEFMP07197 916 aa17.46■□□□□ 0.39
CPT1C-204ENST00000405931 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
CPT1C-204ENST00000405931 KDM5CP41229 1560 aa17.44■□□□□ 0.38
CPT1C-204ENST00000405931 ZMYND15Q9H091 742 aa17.44■□□□□ 0.38
CPT1C-204ENST00000405931 DAXXQ9UER7 740 aaPredicted RBP17.43■□□□□ 0.38
CPT1C-204ENST00000405931 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
CPT1C-204ENST00000405931 GLIPR1L2Q4G1C9 344 aa17.42■□□□□ 0.38
CPT1C-204ENST00000405931 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
CPT1C-204ENST00000405931 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
CPT1C-204ENST00000405931 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
CPT1C-204ENST00000405931 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
CPT1C-204ENST00000405931 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
CPT1C-204ENST00000405931 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
CPT1C-204ENST00000405931 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
CPT1C-204ENST00000405931 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
CPT1C-204ENST00000405931 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
CPT1C-204ENST00000405931 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
CPT1C-204ENST00000405931 PNISRQ8TF01 805 aaKnown RBP17.36■□□□□ 0.37
CPT1C-204ENST00000405931 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
CPT1C-204ENST00000405931 SHANK2Q9UPX8 1470 aa17.36■□□□□ 0.37
CPT1C-204ENST00000405931 TTC37Q6PGP7 1564 aa17.36■□□□□ 0.37
CPT1C-204ENST00000405931 FAM135AQ9P2D6 1515 aa17.36■□□□□ 0.37
CPT1C-204ENST00000405931 CC2D1BQ5T0F9 858 aaKnown RBP17.34■□□□□ 0.37
CPT1C-204ENST00000405931 CHD1O14646 1710 aa17.34■□□□□ 0.37
CPT1C-204ENST00000405931 GSE1Q14687 1217 aa17.34■□□□□ 0.37
CPT1C-204ENST00000405931 PLEKHH2Q8IVE3 1493 aa17.34■□□□□ 0.37
CPT1C-204ENST00000405931 UHRF1BP1Q6BDS2 1440 aa17.34■□□□□ 0.37
CPT1C-204ENST00000405931 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.37
CPT1C-204ENST00000405931 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
CPT1C-204ENST00000405931 PPM1GO15355 546 aaPredicted RBP17.31■□□□□ 0.36
CPT1C-204ENST00000405931 FAM43AQ8N2R8 423 aa17.31■□□□□ 0.36
CPT1C-204ENST00000405931 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
CPT1C-204ENST00000405931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
CPT1C-204ENST00000405931 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
CPT1C-204ENST00000405931 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
CPT1C-204ENST00000405931 KDM5DQ9BY66 1539 aa17.28■□□□□ 0.36
CPT1C-204ENST00000405931 ARHGEF12Q9NZN5 1544 aa17.28■□□□□ 0.36
CPT1C-204ENST00000405931 DISP3Q9P2K9 1392 aa17.27■□□□□ 0.36
CPT1C-204ENST00000405931 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.36
CPT1C-204ENST00000405931 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.35
CPT1C-204ENST00000405931 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
CPT1C-204ENST00000405931 A2MP01023 1474 aa17.26■□□□□ 0.35
CPT1C-204ENST00000405931 MYBBP1AQ9BQG0 1328 aaKnown RBP17.26■□□□□ 0.35
CPT1C-204ENST00000405931 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
CPT1C-204ENST00000405931 CDCA7LQ96GN5 454 aa17.24■□□□□ 0.35
CPT1C-204ENST00000405931 PANK3Q9H999 370 aa17.24■□□□□ 0.35
CPT1C-204ENST00000405931 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
CPT1C-204ENST00000405931 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
CPT1C-204ENST00000405931 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
CPT1C-204ENST00000405931 TESK2Q96S53 571 aa17.21■□□□□ 0.35
CPT1C-204ENST00000405931 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
CPT1C-204ENST00000405931 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
CPT1C-204ENST00000405931 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
CPT1C-204ENST00000405931 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
CPT1C-204ENST00000405931 RALBP1Q15311 655 aa17.19■□□□□ 0.34
CPT1C-204ENST00000405931 PLIN1O60240 522 aa17.18■□□□□ 0.34
CPT1C-204ENST00000405931 EXOC6Q8TAG9 804 aa17.18■□□□□ 0.34
CPT1C-204ENST00000405931 BRD4O60885 1362 aaPredicted RBP17.17■□□□□ 0.34
CPT1C-204ENST00000405931 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
CPT1C-204ENST00000405931 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
CPT1C-204ENST00000405931 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
CPT1C-204ENST00000405931 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
CPT1C-204ENST00000405931 MYO5CQ9NQX4 1742 aa17.16■□□□□ 0.34
CPT1C-204ENST00000405931 SKAP1Q86WV1 359 aa17.16■□□□□ 0.34
CPT1C-204ENST00000405931 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
CPT1C-204ENST00000405931 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
CPT1C-204ENST00000405931 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
CPT1C-204ENST00000405931 UNC13BO14795 1591 aa17.14■□□□□ 0.33
CPT1C-204ENST00000405931 E9PCH4 1651 aa17.13■□□□□ 0.33
CPT1C-204ENST00000405931 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
CPT1C-204ENST00000405931 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
CPT1C-204ENST00000405931 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
CPT1C-204ENST00000405931 TMF1P82094 1093 aa17.12■□□□□ 0.33
CPT1C-204ENST00000405931 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
CPT1C-204ENST00000405931 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
CPT1C-204ENST00000405931 PLCH2O75038 1416 aa17.11■□□□□ 0.33
CPT1C-204ENST00000405931 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
CPT1C-204ENST00000405931 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
CPT1C-204ENST00000405931 ZCCHC11Q5TAX3 1644 aaKnown RBP17.11■□□□□ 0.33
CPT1C-204ENST00000405931 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
CPT1C-204ENST00000405931 KIF3BO15066 747 aa17.09■□□□□ 0.33
CPT1C-204ENST00000405931 IQGAP3Q86VI3 1631 aa17.09■□□□□ 0.33
CPT1C-204ENST00000405931 DUOX2Q9NRD8 1548 aa17.09■□□□□ 0.33
CPT1C-204ENST00000405931 RRP9O43818 475 aaKnown RBP17.09■□□□□ 0.33
CPT1C-204ENST00000405931 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.33
CPT1C-204ENST00000405931 MAST1Q9Y2H9 1570 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms