RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
CDKN1A-203ENST00000405375 MRS2Q9HD23 443 aa22.37■■□□□ 1.17
CDKN1A-203ENST00000405375 MAGI2Q86UL8 1455 aa22.37■■□□□ 1.17
CDKN1A-203ENST00000405375 BCANQ96GW7 911 aa22.37■■□□□ 1.17
CDKN1A-203ENST00000405375 ABCC1P33527 1531 aa22.36■■□□□ 1.17
CDKN1A-203ENST00000405375 KDM2AQ9Y2K7 1162 aa22.36■■□□□ 1.17
CDKN1A-203ENST00000405375 ERBINQ96RT1 1412 aa22.35■■□□□ 1.17
CDKN1A-203ENST00000405375 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
CDKN1A-203ENST00000405375 ROCK2O75116 1388 aaKnown RBP22.34■■□□□ 1.17
CDKN1A-203ENST00000405375 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
CDKN1A-203ENST00000405375 ATP10AO60312 1499 aa22.31■■□□□ 1.16
CDKN1A-203ENST00000405375 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
CDKN1A-203ENST00000405375 TRPM1Q7Z4N2 1603 aa22.31■■□□□ 1.16
CDKN1A-203ENST00000405375 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
CDKN1A-203ENST00000405375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.31■■□□□ 1.162e-7■□□□□ 8
CDKN1A-203ENST00000405375 TRAPPC8Q9Y2L5 1435 aa22.3■■□□□ 1.16
CDKN1A-203ENST00000405375 ST20-MTHFSA0A0A6YYL1 179 aa22.3■■□□□ 1.16
CDKN1A-203ENST00000405375 TSHZ2Q9NRE2 1034 aa22.29■■□□□ 1.16
CDKN1A-203ENST00000405375 A2MP01023 1474 aa22.28■■□□□ 1.16
CDKN1A-203ENST00000405375 POLR3GLQ9BT43 218 aa22.27■■□□□ 1.16
CDKN1A-203ENST00000405375 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
CDKN1A-203ENST00000405375 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
CDKN1A-203ENST00000405375 RTEL1-TNFRSF6BF6WH68 1400 aa22.24■■□□□ 1.15
CDKN1A-203ENST00000405375 RGL3Q3MIN7 710 aa22.23■■□□□ 1.15
CDKN1A-203ENST00000405375 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
CDKN1A-203ENST00000405375 E9PCH4 1651 aa22.22■■□□□ 1.15
CDKN1A-203ENST00000405375 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
CDKN1A-203ENST00000405375 LAMC1P11047 1609 aa22.22■■□□□ 1.15
CDKN1A-203ENST00000405375 SPAG9O60271 1321 aaKnown RBP22.19■■□□□ 1.14
CDKN1A-203ENST00000405375 NBPF1Q3BBV0 1214 aa22.19■■□□□ 1.14
CDKN1A-203ENST00000405375 PRDM15P57071 1507 aaPredicted RBP22.18■■□□□ 1.14
CDKN1A-203ENST00000405375 AFAP1Q8N556 730 aa22.18■■□□□ 1.14
CDKN1A-203ENST00000405375 EIF2AK4Q9P2K8 1649 aaKnown RBP22.18■■□□□ 1.14
CDKN1A-203ENST00000405375 ABCA9Q8IUA7 1624 aa22.17■■□□□ 1.14
CDKN1A-203ENST00000405375 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
CDKN1A-203ENST00000405375 DEPDC5O75140 1603 aa22.14■■□□□ 1.14
CDKN1A-203ENST00000405375 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.14
CDKN1A-203ENST00000405375 FANCAO15360 1455 aa22.13■■□□□ 1.13
CDKN1A-203ENST00000405375 INO80Q9ULG1 1556 aaPredicted RBP22.13■■□□□ 1.13
CDKN1A-203ENST00000405375 CNGB1Q14028 1251 aaPredicted RBP22.13■■□□□ 1.13
CDKN1A-203ENST00000405375 PNISRQ8TF01 805 aaKnown RBP22.11■■□□□ 1.13
CDKN1A-203ENST00000405375 COL17A1Q9UMD9 1497 aaPredicted RBP22.11■■□□□ 1.13
CDKN1A-203ENST00000405375 ERICH6BQ5W0A0 696 aa22.11■■□□□ 1.13
CDKN1A-203ENST00000405375 TRPM2O94759 1503 aa22.11■■□□□ 1.13
CDKN1A-203ENST00000405375 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
CDKN1A-203ENST00000405375 TESK2Q96S53 571 aa22.1■■□□□ 1.13
CDKN1A-203ENST00000405375 RNF17Q9BXT8 1623 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-203ENST00000405375 PTPRTO14522 1441 aa22.09■■□□□ 1.13
CDKN1A-203ENST00000405375 RALBP1Q15311 655 aa22.09■■□□□ 1.13
CDKN1A-203ENST00000405375 IRX6P78412 446 aaPredicted RBP22.09■■□□□ 1.13
CDKN1A-203ENST00000405375 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.12
CDKN1A-203ENST00000405375 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
CDKN1A-203ENST00000405375 BRD4O60885 1362 aaPredicted RBP22.08■■□□□ 1.12
CDKN1A-203ENST00000405375 TET3O43151 1660 aa22.06■■□□□ 1.12
CDKN1A-203ENST00000405375 SPHKAPQ2M3C7 1700 aa22.06■■□□□ 1.12
CDKN1A-203ENST00000405375 TMC1Q8TDI8 760 aa22.06■■□□□ 1.12
CDKN1A-203ENST00000405375 ASXL2Q76L83 1435 aa22.06■■□□□ 1.12
CDKN1A-203ENST00000405375 ADGRL1O94910 1474 aa22.06■■□□□ 1.12
CDKN1A-203ENST00000405375 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
CDKN1A-203ENST00000405375 SMG6Q86US8 1419 aaKnown RBP22.05■■□□□ 1.12
CDKN1A-203ENST00000405375 DISP3Q9P2K9 1392 aa22.05■■□□□ 1.12
CDKN1A-203ENST00000405375 MADDQ8WXG6 1647 aa22.05■■□□□ 1.12
CDKN1A-203ENST00000405375 PER1O15534 1290 aaPredicted RBP22.05■■□□□ 1.12
CDKN1A-203ENST00000405375 CEP152O94986 1710 aa22.04■■□□□ 1.12
CDKN1A-203ENST00000405375 PARD3Q8TEW0 1356 aa22.04■■□□□ 1.12
CDKN1A-203ENST00000405375 SCAPERQ9BY12 1400 aa22.04■■□□□ 1.12
CDKN1A-203ENST00000405375 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
CDKN1A-203ENST00000405375 MYT1Q01538 1121 aa22.01■■□□□ 1.11
CDKN1A-203ENST00000405375 MROH1Q8NDA8 1641 aa22■■□□□ 1.11
CDKN1A-203ENST00000405375 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
CDKN1A-203ENST00000405375 KANK1Q14678 1352 aa21.99■■□□□ 1.11
CDKN1A-203ENST00000405375 WASHC2CQ9Y4E1 1318 aa21.99■■□□□ 1.11
CDKN1A-203ENST00000405375 PPP4R2Q9NY27 417 aa21.98■■□□□ 1.11
CDKN1A-203ENST00000405375 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
CDKN1A-203ENST00000405375 IQGAP1P46940 1657 aa21.97■■□□□ 1.11
CDKN1A-203ENST00000405375 KIF3BO15066 747 aa21.97■■□□□ 1.11
CDKN1A-203ENST00000405375 TMF1P82094 1093 aa21.97■■□□□ 1.11
CDKN1A-203ENST00000405375 NLRP13Q86W25 1043 aa21.97■■□□□ 1.11
CDKN1A-203ENST00000405375 NEURL4Q96JN8 1562 aa21.96■■□□□ 1.11
CDKN1A-203ENST00000405375 KIDINS220Q9ULH0 1771 aa21.95■■□□□ 1.1
CDKN1A-203ENST00000405375 RNF123Q5XPI4 1314 aa21.93■■□□□ 1.1
CDKN1A-203ENST00000405375 PANK3Q9H999 370 aa21.92■■□□□ 1.1
CDKN1A-203ENST00000405375 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
CDKN1A-203ENST00000405375 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
CDKN1A-203ENST00000405375 SCAF11Q99590 1463 aaKnown RBP21.91■■□□□ 1.1
CDKN1A-203ENST00000405375 EFCAB6Q5THR3 1501 aa21.9■■□□□ 1.1
CDKN1A-203ENST00000405375 MYT1LQ9UL68 1186 aa21.9■■□□□ 1.1
CDKN1A-203ENST00000405375 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.09
CDKN1A-203ENST00000405375 KIAA1210Q9ULL0 1709 aa21.88■■□□□ 1.09
CDKN1A-203ENST00000405375 LMTK2Q8IWU2 1503 aa21.87■■□□□ 1.09
CDKN1A-203ENST00000405375 UGGT1Q9NYU2 1555 aa21.86■■□□□ 1.09
CDKN1A-203ENST00000405375 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
CDKN1A-203ENST00000405375 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
CDKN1A-203ENST00000405375 SENP3-EIF4A1A0A087X0R7 540 aa21.85■■□□□ 1.09
CDKN1A-203ENST00000405375 MYOM2P54296 1465 aa21.85■■□□□ 1.09
CDKN1A-203ENST00000405375 INSRP06213 1382 aa21.84■■□□□ 1.09
CDKN1A-203ENST00000405375 POGZQ7Z3K3 1410 aa21.84■■□□□ 1.09
CDKN1A-203ENST00000405375 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
CDKN1A-203ENST00000405375 ZMYM4Q5VZL5 1548 aa21.84■■□□□ 1.09
CDKN1A-203ENST00000405375 CD109Q6YHK3 1445 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms