RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 CCDC141Q6ZP82 1450 aa28.78■■■□□ 2.2
HDAC11-204ENST00000404040 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
HDAC11-204ENST00000404040 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
HDAC11-204ENST00000404040 NEURL4Q96JN8 1562 aa28.76■■■□□ 2.19
HDAC11-204ENST00000404040 PZPP20742 1482 aa28.74■■■□□ 2.19
HDAC11-204ENST00000404040 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
HDAC11-204ENST00000404040 ARHGEF5Q12774 1597 aa28.71■■■□□ 2.19
HDAC11-204ENST00000404040 UBAP1LF5GYI3 381 aa28.71■■■□□ 2.19
HDAC11-204ENST00000404040 TNRQ92752 1358 aa28.7■■■□□ 2.18
HDAC11-204ENST00000404040 CPS1P31327 1500 aa28.66■■■□□ 2.18
HDAC11-204ENST00000404040 RNF17Q9BXT8 1623 aaKnown RBP28.65■■■□□ 2.18
HDAC11-204ENST00000404040 KIF3BO15066 747 aa28.65■■■□□ 2.18
HDAC11-204ENST00000404040 ZC3H13Q5T200 1668 aaKnown RBP28.64■■■□□ 2.17
HDAC11-204ENST00000404040 DEPDC5O75140 1603 aa28.62■■■□□ 2.17
HDAC11-204ENST00000404040 FBXO31Q5XUX0 539 aaPredicted RBP28.62■■■□□ 2.17
HDAC11-204ENST00000404040 NLRP1Q9C000 1473 aa28.61■■■□□ 2.17
HDAC11-204ENST00000404040 VWDEQ8N2E2 1590 aa28.6■■■□□ 2.17
HDAC11-204ENST00000404040 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
HDAC11-204ENST00000404040 MAST1Q9Y2H9 1570 aa28.59■■■□□ 2.17
HDAC11-204ENST00000404040 RSPH4AQ5TD94 716 aa28.59■■■□□ 2.17
HDAC11-204ENST00000404040 UGGT1Q9NYU2 1555 aa28.58■■■□□ 2.17
HDAC11-204ENST00000404040 EIF2AK4Q9P2K8 1649 aaKnown RBP28.58■■■□□ 2.17
HDAC11-204ENST00000404040 IQGAP1P46940 1657 aa28.58■■■□□ 2.16
HDAC11-204ENST00000404040 WASHC2CQ9Y4E1 1318 aa28.57■■■□□ 2.16
HDAC11-204ENST00000404040 MIA2Q96PC5 1412 aa28.56■■■□□ 2.16
HDAC11-204ENST00000404040 ABCC3O15438 1527 aa28.54■■■□□ 2.16
HDAC11-204ENST00000404040 MED14O60244 1454 aa28.54■■■□□ 2.16
HDAC11-204ENST00000404040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.54■■■□□ 2.16
HDAC11-204ENST00000404040 CEP152O94986 1710 aa28.53■■■□□ 2.16
HDAC11-204ENST00000404040 MROH1Q8NDA8 1641 aa28.52■■■□□ 2.16
HDAC11-204ENST00000404040 CFAP65Q6ZU64 1925 aaKnown RBP28.51■■■□□ 2.16
HDAC11-204ENST00000404040 MED1Q15648 1581 aaPredicted RBP28.51■■■□□ 2.15
HDAC11-204ENST00000404040 STRCP1A6NGW2 1772 aa28.51■■■□□ 2.15
HDAC11-204ENST00000404040 LRRC9Q6ZRR7 1453 aa28.51■■■□□ 2.15
HDAC11-204ENST00000404040 NPHP4O75161 1426 aaPredicted RBP28.5■■■□□ 2.15
HDAC11-204ENST00000404040 ANKLE2Q86XL3 938 aa28.49■■■□□ 2.15
HDAC11-204ENST00000404040 ALKQ9UM73 1620 aa28.48■■■□□ 2.15
HDAC11-204ENST00000404040 THEMISQ8N1K5 641 aaPredicted RBP28.48■■■□□ 2.15
HDAC11-204ENST00000404040 TSPY4P0CV99 314 aa28.47■■■□□ 2.15
HDAC11-204ENST00000404040 TSPY10P0CW01 314 aa28.47■■■□□ 2.15
HDAC11-204ENST00000404040 SYNMO15061 1565 aa28.46■■■□□ 2.15
HDAC11-204ENST00000404040 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
HDAC11-204ENST00000404040 UBR1Q8IWV7 1749 aa28.46■■■□□ 2.15
HDAC11-204ENST00000404040 ERVK-7P63135 1459 aa28.46■■■□□ 2.15
HDAC11-204ENST00000404040 SCAF1Q9H7N4 1312 aaKnown RBP28.45■■■□□ 2.15
HDAC11-204ENST00000404040 TOM1O60784 492 aa28.44■■■□□ 2.14
HDAC11-204ENST00000404040 HSPA1LP34931 641 aa28.44■■■□□ 2.14
HDAC11-204ENST00000404040 PIP4K2BP78356 416 aa28.43■■■□□ 2.14
HDAC11-204ENST00000404040 CROCC2H7BZ55 1655 aa28.42■■■□□ 2.14
HDAC11-204ENST00000404040 MAP3K1Q13233 1512 aa28.41■■■□□ 2.14
HDAC11-204ENST00000404040 DUOX2Q9NRD8 1548 aa28.38■■■□□ 2.13
HDAC11-204ENST00000404040 MYOM3Q5VTT5 1437 aa28.37■■■□□ 2.13
HDAC11-204ENST00000404040 PRDM15P57071 1507 aaPredicted RBP28.37■■■□□ 2.13
HDAC11-204ENST00000404040 LRRC7Q96NW7 1537 aa28.35■■■□□ 2.13
HDAC11-204ENST00000404040 XIRP1Q702N8 1843 aaKnown RBP28.31■■■□□ 2.12
HDAC11-204ENST00000404040 SCAF11Q99590 1463 aaKnown RBP28.3■■■□□ 2.12
HDAC11-204ENST00000404040 SLIT1O75093 1534 aa28.28■■■□□ 2.12
HDAC11-204ENST00000404040 KANK4Q5T7N3 995 aaPredicted RBP28.28■■■□□ 2.12
HDAC11-204ENST00000404040 ARHGAP23Q9P227 1491 aa28.27■■■□□ 2.12
HDAC11-204ENST00000404040 ARHGAP31Q2M1Z3 1444 aa28.26■■■□□ 2.11
HDAC11-204ENST00000404040 ERBINQ96RT1 1412 aa28.26■■■□□ 2.11
HDAC11-204ENST00000404040 PIK3C2BO00750 1634 aa28.25■■■□□ 2.11
HDAC11-204ENST00000404040 PTPN23Q9H3S7 1636 aa28.25■■■□□ 2.11
HDAC11-204ENST00000404040 LOC105371045A0A1W2PR82 267 aa28.24■■■□□ 2.11
HDAC11-204ENST00000404040 KIF15Q9NS87 1388 aa28.24■■■□□ 2.11
HDAC11-204ENST00000404040 KDM5AP29375 1690 aaKnown RBP28.23■■■□□ 2.11
HDAC11-204ENST00000404040 ABCC5O15440 1437 aa28.2■■■□□ 2.11
HDAC11-204ENST00000404040 LTKP29376 864 aa28.15■■■□□ 2.1
HDAC11-204ENST00000404040 DAPK1P53355 1430 aa28.15■■■□□ 2.1
HDAC11-204ENST00000404040 PHF23Q9BUL5 403 aaPredicted RBP28.14■■■□□ 2.1
HDAC11-204ENST00000404040 LMTK2Q8IWU2 1503 aa28.13■■■□□ 2.09
HDAC11-204ENST00000404040 TXNDC2Q86VQ3 553 aa28.12■■■□□ 2.09
HDAC11-204ENST00000404040 EFCAB6Q5THR3 1501 aa28.12■■■□□ 2.09
HDAC11-204ENST00000404040 RRP7BPQ9NSQ0 103 aa28.1■■■□□ 2.09
HDAC11-204ENST00000404040 TMEM2Q9UHN6 1383 aa28.1■■■□□ 2.09
HDAC11-204ENST00000404040 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
HDAC11-204ENST00000404040 FGD6Q6ZV73 1430 aa28.09■■■□□ 2.09
HDAC11-204ENST00000404040 KANK1Q14678 1352 aa28.08■■■□□ 2.09
HDAC11-204ENST00000404040 EID1Q9Y6B2 187 aa28.07■■■□□ 2.08
HDAC11-204ENST00000404040 ADGRB3O60242 1522 aa28.05■■■□□ 2.08
HDAC11-204ENST00000404040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.05■■■□□ 2.08
HDAC11-204ENST00000404040 TET3O43151 1660 aa28.03■■■□□ 2.08
HDAC11-204ENST00000404040 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
HDAC11-204ENST00000404040 ANKRD30AQ9BXX3 1397 aa28.01■■■□□ 2.07
HDAC11-204ENST00000404040 NWD1Q149M9 1564 aa28.01■■■□□ 2.07
HDAC11-204ENST00000404040 ROBO1Q9Y6N7 1651 aa28■■■□□ 2.07
HDAC11-204ENST00000404040 NOS1P29475 1434 aa28■■■□□ 2.07
HDAC11-204ENST00000404040 STAG3Q9UJ98 1225 aa27.98■■■□□ 2.07
HDAC11-204ENST00000404040 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
HDAC11-204ENST00000404040 TMEM94Q12767 1356 aa27.97■■■□□ 2.07
HDAC11-204ENST00000404040 ADGRL2O95490 1459 aa27.96■■■□□ 2.07
HDAC11-204ENST00000404040 IDI1Q13907 227 aa27.96■■■□□ 2.07
HDAC11-204ENST00000404040 NKTRP30414 1462 aaKnown RBP27.95■■■□□ 2.07
HDAC11-204ENST00000404040 APLP2Q06481 763 aa27.95■■■□□ 2.06
HDAC11-204ENST00000404040 GCC2Q8IWJ2 1684 aa27.94■■■□□ 2.06
HDAC11-204ENST00000404040 CHIC2Q9UKJ5 165 aa27.92■■■□□ 2.06
HDAC11-204ENST00000404040 CHD2O14647 1828 aaKnown RBP27.92■■■□□ 2.06
HDAC11-204ENST00000404040 RPRD2Q5VT52 1461 aaKnown RBP27.91■■■□□ 2.06
HDAC11-204ENST00000404040 KCNA6P17658 529 aa27.91■■■□□ 2.06
HDAC11-204ENST00000404040 RGS17Q9UGC6 210 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms