RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 DEKP35659 375 aaKnown RBP7.61□□□□□ -1.19
CNGA1-202ENST00000402813 MCM6Q14566 821 aa7.61□□□□□ -1.19
CNGA1-202ENST00000402813 RNF25Q96BH1 459 aaPredicted RBP7.61□□□□□ -1.19
CNGA1-202ENST00000402813 POLA2Q14181 598 aa7.61□□□□□ -1.19
CNGA1-202ENST00000402813 RTL5Q5HYW3 569 aaPredicted RBP7.61□□□□□ -1.19
CNGA1-202ENST00000402813 FAM9BQ8IZU0 186 aa7.61□□□□□ -1.19
CNGA1-202ENST00000402813 MORC4Q8TE76 937 aa7.61□□□□□ -1.19
CNGA1-202ENST00000402813 UBXN4Q92575 508 aa7.61□□□□□ -1.19
CNGA1-202ENST00000402813 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
CNGA1-202ENST00000402813 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
CNGA1-202ENST00000402813 SPINK5Q9NQ38 1064 aaPredicted RBP7.6□□□□□ -1.19
CNGA1-202ENST00000402813 RAB11FIP3O75154 756 aa7.6□□□□□ -1.19
CNGA1-202ENST00000402813 NACADO15069 1562 aa7.59□□□□□ -1.19
CNGA1-202ENST00000402813 RB1CC1Q8TDY2 1594 aa7.59□□□□□ -1.19
CNGA1-202ENST00000402813 CCDC181Q5TID7 509 aa7.59□□□□□ -1.19
CNGA1-202ENST00000402813 ZNF662Q6ZS27 426 aa7.59□□□□□ -1.19
CNGA1-202ENST00000402813 MRRFQ96E11 262 aaKnown RBP7.59□□□□□ -1.19
CNGA1-202ENST00000402813 FAM193AP78312 1265 aa7.58□□□□□ -1.2
CNGA1-202ENST00000402813 GIMAP6Q6P9H5 292 aa7.58□□□□□ -1.2
CNGA1-202ENST00000402813 TSHZ1Q6ZSZ6 1077 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 MAGEC2Q9UBF1 373 aaPredicted RBP7.57□□□□□ -1.2
CNGA1-202ENST00000402813 PPFIA4O75335 1185 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 MYBPC2Q14324 1141 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 LONRF3Q496Y0 759 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 RBM26Q5T8P6 1007 aaKnown RBP7.57□□□□□ -1.2
CNGA1-202ENST00000402813 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 GOPCQ9HD26 462 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 CIZ1Q9ULV3 898 aaPredicted RBP7.57□□□□□ -1.2
CNGA1-202ENST00000402813 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
CNGA1-202ENST00000402813 CADPS2Q86UW7 1296 aa7.56□□□□□ -1.2
CNGA1-202ENST00000402813 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
CNGA1-202ENST00000402813 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
CNGA1-202ENST00000402813 ACIN1Q9UKV3 1341 aaKnown RBP7.56□□□□□ -1.2
CNGA1-202ENST00000402813 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
CNGA1-202ENST00000402813 RYDENQ9NUL5 291 aaKnown RBP7.55□□□□□ -1.2
CNGA1-202ENST00000402813 IVNS1ABPQ9Y6Y0 642 aa7.55□□□□□ -1.2
CNGA1-202ENST00000402813 METTL14Q9HCE5 456 aaKnown RBP7.54□□□□□ -1.2
CNGA1-202ENST00000402813 MKRN4PQ13434 485 aaPredicted RBP7.54□□□□□ -1.2
CNGA1-202ENST00000402813 RINLQ6ZS11 566 aa7.54□□□□□ -1.2
CNGA1-202ENST00000402813 USTQ9Y2C2 406 aa7.53□□□□□ -1.2
CNGA1-202ENST00000402813 MAP4K4O95819 1239 aaPredicted RBP7.53□□□□□ -1.2
CNGA1-202ENST00000402813 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
CNGA1-202ENST00000402813 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
CNGA1-202ENST00000402813 CDCA7Q9BWT1 371 aaPredicted RBP7.53□□□□□ -1.2
CNGA1-202ENST00000402813 SDR16C5Q8N3Y7 309 aa7.53□□□□□ -1.2
CNGA1-202ENST00000402813 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
CNGA1-202ENST00000402813 EXOC5O00471 708 aa7.52□□□□□ -1.21
CNGA1-202ENST00000402813 CLGNO14967 610 aa7.52□□□□□ -1.21
CNGA1-202ENST00000402813 FOXD4Q12950 439 aaPredicted RBP7.52□□□□□ -1.21
CNGA1-202ENST00000402813 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.21
CNGA1-202ENST00000402813 ARID4AP29374 1257 aaPredicted RBP7.51□□□□□ -1.21
CNGA1-202ENST00000402813 CLEC4GQ6UXB4 293 aa7.51□□□□□ -1.21
CNGA1-202ENST00000402813 RBM46Q8TBY0 533 aaKnown RBP7.51□□□□□ -1.21
CNGA1-202ENST00000402813 SMYD5Q6GMV2 418 aa7.51□□□□□ -1.21
CNGA1-202ENST00000402813 MAMSTRQ6ZN01 415 aa7.51□□□□□ -1.21
CNGA1-202ENST00000402813 KRI1Q8N9T8 703 aaKnown RBP7.51□□□□□ -1.21
CNGA1-202ENST00000402813 MAF1Q9H063 256 aa7.51□□□□□ -1.21
CNGA1-202ENST00000402813 PEX14O75381 377 aa7.5□□□□□ -1.21
CNGA1-202ENST00000402813 ZC3H6P61129 1189 aaKnown RBP7.5□□□□□ -1.21
CNGA1-202ENST00000402813 CHMP4BQ9H444 224 aaKnown RBP7.5□□□□□ -1.21
CNGA1-202ENST00000402813 VGFO15240 615 aaPredicted RBP7.5□□□□□ -1.21
CNGA1-202ENST00000402813 CREB3O43889 395 aa7.5□□□□□ -1.21
CNGA1-202ENST00000402813 APLP1P51693 650 aa7.5□□□□□ -1.21
CNGA1-202ENST00000402813 CACTIN-AS1Q8N1I8 211 aa7.5□□□□□ -1.21
CNGA1-202ENST00000402813 SF3A1Q15459 793 aaKnown RBP7.49□□□□□ -1.21
CNGA1-202ENST00000402813 FOSBP53539 338 aa7.49□□□□□ -1.21
CNGA1-202ENST00000402813 SKIV2LQ15477 1246 aaKnown RBP7.49□□□□□ -1.21
CNGA1-202ENST00000402813 CCDC194A0A1B0GVG4 234 aa7.48□□□□□ -1.21
CNGA1-202ENST00000402813 GPATCH3Q96I76 525 aa7.48□□□□□ -1.21
CNGA1-202ENST00000402813 KLHL42Q9P2K6 505 aa7.48□□□□□ -1.21
CNGA1-202ENST00000402813 LIG1P18858 919 aa7.48□□□□□ -1.21
CNGA1-202ENST00000402813 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
CNGA1-202ENST00000402813 CCER2I3L3R5 266 aa7.47□□□□□ -1.21
CNGA1-202ENST00000402813 CALRP27797 417 aaKnown RBP7.47□□□□□ -1.21
CNGA1-202ENST00000402813 MMP14P50281 582 aa7.47□□□□□ -1.21
CNGA1-202ENST00000402813 TTC36A6NLP5 189 aa7.46□□□□□ -1.22
CNGA1-202ENST00000402813 PARNO95453 639 aaKnown RBP7.46□□□□□ -1.22
CNGA1-202ENST00000402813 TBC1D12O60347 775 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 DPH6Q7L8W6 267 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 NBPF11Q86T75 865 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 PMM1Q92871 262 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 EEA1Q15075 1411 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 SBNO2Q9Y2G9 1366 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 ZNF16P17020 682 aaPredicted RBP7.45□□□□□ -1.22
CNGA1-202ENST00000402813 NOP9Q86U38 636 aaKnown RBP7.45□□□□□ -1.22
CNGA1-202ENST00000402813 LARGE2Q8N3Y3 721 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 JADE2Q9NQC1 790 aa7.45□□□□□ -1.22
CNGA1-202ENST00000402813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.45□□□□□ -1.22
CNGA1-202ENST00000402813 EIF4G1Q04637 1599 aaKnown RBP7.45□□□□□ -1.22
CNGA1-202ENST00000402813 STK25O00506 426 aa7.44□□□□□ -1.22
CNGA1-202ENST00000402813 PSME1Q06323 249 aa7.44□□□□□ -1.22
CNGA1-202ENST00000402813 WDR78Q5VTH9 848 aa7.44□□□□□ -1.22
CNGA1-202ENST00000402813 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
CNGA1-202ENST00000402813 PPP1R1BQ9UD71 204 aaPredicted RBP7.44□□□□□ -1.22
CNGA1-202ENST00000402813 SH3BP5O60239 455 aa7.44□□□□□ -1.22
CNGA1-202ENST00000402813 CCDC96Q2M329 555 aa7.44□□□□□ -1.22
CNGA1-202ENST00000402813 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
CNGA1-202ENST00000402813 NAALADL2Q58DX5 795 aa7.43□□□□□ -1.22
CNGA1-202ENST00000402813 PNMA2Q9UL42 364 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms