RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 USP47Q96K76 1375 aa17.93■□□□□ 0.46
PRAME-203ENST00000402697 C11orf95C9JLR9 678 aaPredicted RBP17.93■□□□□ 0.46
PRAME-203ENST00000402697 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
PRAME-203ENST00000402697 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
PRAME-203ENST00000402697 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
PRAME-203ENST00000402697 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
PRAME-203ENST00000402697 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
PRAME-203ENST00000402697 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRAME-203ENST00000402697 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
PRAME-203ENST00000402697 MAGI2Q86UL8 1455 aa17.89■□□□□ 0.45
PRAME-203ENST00000402697 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRAME-203ENST00000402697 IQGAP3Q86VI3 1631 aa17.89■□□□□ 0.45
PRAME-203ENST00000402697 ERBINQ96RT1 1412 aa17.88■□□□□ 0.45
PRAME-203ENST00000402697 ADGRL1O94910 1474 aa17.88■□□□□ 0.45
PRAME-203ENST00000402697 KTN1Q86UP2 1357 aaKnown RBP17.87■□□□□ 0.45
PRAME-203ENST00000402697 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
PRAME-203ENST00000402697 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
PRAME-203ENST00000402697 ATP7AQ04656 1500 aa17.86■□□□□ 0.45
PRAME-203ENST00000402697 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
PRAME-203ENST00000402697 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
PRAME-203ENST00000402697 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
PRAME-203ENST00000402697 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
PRAME-203ENST00000402697 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
PRAME-203ENST00000402697 ATP10AO60312 1499 aa17.84■□□□□ 0.45
PRAME-203ENST00000402697 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
PRAME-203ENST00000402697 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
PRAME-203ENST00000402697 LAMC1P11047 1609 aa17.82■□□□□ 0.44
PRAME-203ENST00000402697 SPAG9O60271 1321 aaKnown RBP17.82■□□□□ 0.44
PRAME-203ENST00000402697 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
PRAME-203ENST00000402697 DEPDC5O75140 1603 aa17.81■□□□□ 0.44
PRAME-203ENST00000402697 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
PRAME-203ENST00000402697 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
PRAME-203ENST00000402697 KIDINS220Q9ULH0 1771 aa17.8■□□□□ 0.44
PRAME-203ENST00000402697 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
PRAME-203ENST00000402697 EIF2AK4Q9P2K8 1649 aaKnown RBP17.78■□□□□ 0.44
PRAME-203ENST00000402697 ZNF518AQ6AHZ1 1483 aa17.78■□□□□ 0.44
PRAME-203ENST00000402697 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
PRAME-203ENST00000402697 TRPM1Q7Z4N2 1603 aa17.77■□□□□ 0.44
PRAME-203ENST00000402697 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
PRAME-203ENST00000402697 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
PRAME-203ENST00000402697 POGZQ7Z3K3 1410 aa17.75■□□□□ 0.43
PRAME-203ENST00000402697 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
PRAME-203ENST00000402697 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
PRAME-203ENST00000402697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.435e-17■■□□□ 11.4
PRAME-203ENST00000402697 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
PRAME-203ENST00000402697 GLI2P10070 1586 aa17.74■□□□□ 0.43
PRAME-203ENST00000402697 CCDC184Q52MB2 194 aa17.74■□□□□ 0.43
PRAME-203ENST00000402697 RALBP1Q15311 655 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 BCANQ96GW7 911 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 E9PCH4 1651 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 PLA2R1Q13018 1463 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 NEO1Q92859 1461 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 MROH1Q8NDA8 1641 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
PRAME-203ENST00000402697 VWDEQ8N2E2 1590 aa17.72■□□□□ 0.43
PRAME-203ENST00000402697 HECW2Q9P2P5 1572 aa17.72■□□□□ 0.43
PRAME-203ENST00000402697 PRDM15P57071 1507 aaPredicted RBP17.71■□□□□ 0.43
PRAME-203ENST00000402697 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.43
PRAME-203ENST00000402697 DIP2BQ9P265 1576 aa17.71■□□□□ 0.43
PRAME-203ENST00000402697 BRD4O60885 1362 aaPredicted RBP17.7■□□□□ 0.42
PRAME-203ENST00000402697 TET3O43151 1660 aa17.7■□□□□ 0.42
PRAME-203ENST00000402697 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
PRAME-203ENST00000402697 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
PRAME-203ENST00000402697 RICTORQ6R327 1708 aa17.69■□□□□ 0.42
PRAME-203ENST00000402697 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
PRAME-203ENST00000402697 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
PRAME-203ENST00000402697 A2MP01023 1474 aa17.68■□□□□ 0.42
PRAME-203ENST00000402697 ABCA6Q8N139 1617 aa17.68■□□□□ 0.42
PRAME-203ENST00000402697 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
PRAME-203ENST00000402697 FRMPD1Q5SYB0 1578 aa17.67■□□□□ 0.42
PRAME-203ENST00000402697 RNF17Q9BXT8 1623 aaKnown RBP17.67■□□□□ 0.42
PRAME-203ENST00000402697 SPHKAPQ2M3C7 1700 aa17.67■□□□□ 0.42
PRAME-203ENST00000402697 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
PRAME-203ENST00000402697 INSRP06213 1382 aa17.65■□□□□ 0.42
PRAME-203ENST00000402697 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
PRAME-203ENST00000402697 PNISRQ8TF01 805 aaKnown RBP17.64■□□□□ 0.41
PRAME-203ENST00000402697 PPRC1Q5VV67 1664 aaKnown RBP17.64■□□□□ 0.41
PRAME-203ENST00000402697 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
PRAME-203ENST00000402697 TRPM2O94759 1503 aa17.63■□□□□ 0.41
PRAME-203ENST00000402697 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
PRAME-203ENST00000402697 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
PRAME-203ENST00000402697 COL17A1Q9UMD9 1497 aaPredicted RBP17.63■□□□□ 0.41
PRAME-203ENST00000402697 CEP152O94986 1710 aa17.62■□□□□ 0.41
PRAME-203ENST00000402697 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
PRAME-203ENST00000402697 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
PRAME-203ENST00000402697 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
PRAME-203ENST00000402697 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
PRAME-203ENST00000402697 PTPRTO14522 1441 aa17.6■□□□□ 0.41
PRAME-203ENST00000402697 KIF3BO15066 747 aa17.6■□□□□ 0.41
PRAME-203ENST00000402697 EFCAB6Q5THR3 1501 aa17.6■□□□□ 0.41
PRAME-203ENST00000402697 TSPOAP1O95153 1857 aa17.59■□□□□ 0.41
PRAME-203ENST00000402697 PARD3Q8TEW0 1356 aa17.59■□□□□ 0.41
PRAME-203ENST00000402697 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
PRAME-203ENST00000402697 CLTCL1P53675 1640 aa17.59■□□□□ 0.41
PRAME-203ENST00000402697 KANK1Q14678 1352 aa17.58■□□□□ 0.41
PRAME-203ENST00000402697 LMTK2Q8IWU2 1503 aa17.58■□□□□ 0.4
PRAME-203ENST00000402697 RGL3Q3MIN7 710 aa17.58■□□□□ 0.4
PRAME-203ENST00000402697 NLRP13Q86W25 1043 aa17.58■□□□□ 0.4
PRAME-203ENST00000402697 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
PRAME-203ENST00000402697 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms