RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
HPS4-203ENST00000402105 KNSTRNQ9Y448 316 aa12□□□□□ -0.49
HPS4-203ENST00000402105 PZPP20742 1482 aa11.99□□□□□ -0.49
HPS4-203ENST00000402105 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
HPS4-203ENST00000402105 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
HPS4-203ENST00000402105 GSE1Q14687 1217 aa11.98□□□□□ -0.49
HPS4-203ENST00000402105 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
HPS4-203ENST00000402105 MS4A1P11836 297 aa11.98□□□□□ -0.49
HPS4-203ENST00000402105 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
HPS4-203ENST00000402105 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
HPS4-203ENST00000402105 FRAT2O75474 233 aaPredicted RBP11.97□□□□□ -0.49
HPS4-203ENST00000402105 TMF1P82094 1093 aa11.97□□□□□ -0.49
HPS4-203ENST00000402105 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
HPS4-203ENST00000402105 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
HPS4-203ENST00000402105 BCORL1Q5H9F3 1711 aa11.96□□□□□ -0.49
HPS4-203ENST00000402105 IQGAP2Q13576 1575 aa11.96□□□□□ -0.5
HPS4-203ENST00000402105 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.5
HPS4-203ENST00000402105 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
HPS4-203ENST00000402105 GCC2Q8IWJ2 1684 aa11.96□□□□□ -0.5
HPS4-203ENST00000402105 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
HPS4-203ENST00000402105 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
HPS4-203ENST00000402105 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
HPS4-203ENST00000402105 BCAR3O75815 825 aa11.94□□□□□ -0.5
HPS4-203ENST00000402105 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.94□□□□□ -0.5
HPS4-203ENST00000402105 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
HPS4-203ENST00000402105 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
HPS4-203ENST00000402105 APAF1O14727 1248 aa11.93□□□□□ -0.5
HPS4-203ENST00000402105 NUP153P49790 1475 aaKnown RBP11.93□□□□□ -0.5
HPS4-203ENST00000402105 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
HPS4-203ENST00000402105 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
HPS4-203ENST00000402105 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
HPS4-203ENST00000402105 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
HPS4-203ENST00000402105 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
HPS4-203ENST00000402105 TROQ12816 1431 aaPredicted RBP11.91□□□□□ -0.5
HPS4-203ENST00000402105 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
HPS4-203ENST00000402105 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
HPS4-203ENST00000402105 CENPQQ7L2Z9 268 aaPredicted RBP11.9□□□□□ -0.5
HPS4-203ENST00000402105 WDR62O43379 1518 aa11.9□□□□□ -0.5
HPS4-203ENST00000402105 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
HPS4-203ENST00000402105 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
HPS4-203ENST00000402105 C9orf84Q5VXU9 1444 aa11.9□□□□□ -0.51
HPS4-203ENST00000402105 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
HPS4-203ENST00000402105 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
HPS4-203ENST00000402105 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
HPS4-203ENST00000402105 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
HPS4-203ENST00000402105 PANK1Q8TE04 598 aa11.88□□□□□ -0.51
HPS4-203ENST00000402105 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
HPS4-203ENST00000402105 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
HPS4-203ENST00000402105 DNMT1P26358 1616 aaKnown RBP11.87□□□□□ -0.51
HPS4-203ENST00000402105 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
HPS4-203ENST00000402105 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
HPS4-203ENST00000402105 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
HPS4-203ENST00000402105 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
HPS4-203ENST00000402105 C8orf34Q49A92 452 aa11.86□□□□□ -0.51
HPS4-203ENST00000402105 TESK2Q96S53 571 aa11.86□□□□□ -0.51
HPS4-203ENST00000402105 KDM5CP41229 1560 aa11.85□□□□□ -0.51
HPS4-203ENST00000402105 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
HPS4-203ENST00000402105 IGHDP01880 384 aa11.84□□□□□ -0.51
HPS4-203ENST00000402105 SEC24BO95487 1268 aa11.84□□□□□ -0.51
HPS4-203ENST00000402105 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
HPS4-203ENST00000402105 DISP1Q96F81 1524 aa11.83□□□□□ -0.52
HPS4-203ENST00000402105 POGKQ9P215 609 aa11.83□□□□□ -0.52
HPS4-203ENST00000402105 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
HPS4-203ENST00000402105 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
HPS4-203ENST00000402105 CARMIL2Q6F5E8 1435 aa11.81□□□□□ -0.52
HPS4-203ENST00000402105 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
HPS4-203ENST00000402105 KIF14Q15058 1648 aa11.81□□□□□ -0.52
HPS4-203ENST00000402105 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
HPS4-203ENST00000402105 KDM2BQ8NHM5 1336 aa11.8□□□□□ -0.52
HPS4-203ENST00000402105 SLFN5Q08AF3 891 aa11.8□□□□□ -0.52
HPS4-203ENST00000402105 UHRF1BP1Q6BDS2 1440 aa11.8□□□□□ -0.52
HPS4-203ENST00000402105 BECN1Q14457 450 aa11.79□□□□□ -0.52
HPS4-203ENST00000402105 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
HPS4-203ENST00000402105 RAPGEF6Q8TEU7 1601 aa11.79□□□□□ -0.52
HPS4-203ENST00000402105 CENPJQ9HC77 1338 aaPredicted RBP11.79□□□□□ -0.52
HPS4-203ENST00000402105 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
HPS4-203ENST00000402105 PRAG1Q86YV5 1406 aa11.78□□□□□ -0.52
HPS4-203ENST00000402105 KIAA0556O60303 1618 aa11.77□□□□□ -0.53
HPS4-203ENST00000402105 CDCA8Q53HL2 280 aa11.77□□□□□ -0.53
HPS4-203ENST00000402105 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
HPS4-203ENST00000402105 TARBP1Q13395 1621 aaKnown RBP11.76□□□□□ -0.53
HPS4-203ENST00000402105 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
HPS4-203ENST00000402105 CFAP70Q5T0N1 1121 aa11.76□□□□□ -0.53
HPS4-203ENST00000402105 MFAP1P55081 439 aaKnown RBP11.76□□□□□ -0.53
HPS4-203ENST00000402105 SAFB2Q14151 953 aaKnown RBP eCLIP11.76□□□□□ -0.53
HPS4-203ENST00000402105 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
HPS4-203ENST00000402105 GRIN2AQ12879 1464 aa11.75□□□□□ -0.53
HPS4-203ENST00000402105 E9PSI1 815 aa11.75□□□□□ -0.53
HPS4-203ENST00000402105 MORC1Q86VD1 984 aa11.75□□□□□ -0.53
HPS4-203ENST00000402105 MAGI1Q96QZ7 1491 aaPredicted RBP11.75□□□□□ -0.53
HPS4-203ENST00000402105 AFAP1Q8N556 730 aa11.74□□□□□ -0.53
HPS4-203ENST00000402105 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
HPS4-203ENST00000402105 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
HPS4-203ENST00000402105 PBRM1Q86U86 1689 aa11.73□□□□□ -0.53
HPS4-203ENST00000402105 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
HPS4-203ENST00000402105 PTPRGP23470 1445 aa11.73□□□□□ -0.53
HPS4-203ENST00000402105 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
HPS4-203ENST00000402105 ATP10BO94823 1461 aa11.72□□□□□ -0.53
HPS4-203ENST00000402105 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
HPS4-203ENST00000402105 NAP1L5Q96NT1 182 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms