RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 PAK3O75914 559 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-202ENST00000400186 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
CSMD1-202ENST00000400186 GPS2Q13227 327 aa11.87□□□□□ -0.51
CSMD1-202ENST00000400186 SKOR2Q2VWA4 1001 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-202ENST00000400186 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
CSMD1-202ENST00000400186 TPD52L1Q16890 204 aaPredicted RBP11.86□□□□□ -0.51
CSMD1-202ENST00000400186 TPM1P09493 284 aa11.86□□□□□ -0.51
CSMD1-202ENST00000400186 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
CSMD1-202ENST00000400186 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
CSMD1-202ENST00000400186 GSE1Q14687 1217 aa11.85□□□□□ -0.51
CSMD1-202ENST00000400186 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
CSMD1-202ENST00000400186 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
CSMD1-202ENST00000400186 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
CSMD1-202ENST00000400186 CUX2O14529 1486 aa11.85□□□□□ -0.51
CSMD1-202ENST00000400186 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
CSMD1-202ENST00000400186 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
CSMD1-202ENST00000400186 VPS53Q5VIR6 699 aa11.84□□□□□ -0.51
CSMD1-202ENST00000400186 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
CSMD1-202ENST00000400186 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
CSMD1-202ENST00000400186 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
CSMD1-202ENST00000400186 BECN2A8MW95 431 aa11.83□□□□□ -0.52
CSMD1-202ENST00000400186 TMX4Q9H1E5 349 aaPredicted RBP11.83□□□□□ -0.52
CSMD1-202ENST00000400186 CSB-PGBD3P0DP91 1061 aa11.83□□□□□ -0.52
CSMD1-202ENST00000400186 CARMIL1Q5VZK9 1371 aa11.83□□□□□ -0.52
CSMD1-202ENST00000400186 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
CSMD1-202ENST00000400186 TEX35Q5T0J7 233 aa11.82□□□□□ -0.52
CSMD1-202ENST00000400186 NUP155O75694 1391 aa11.82□□□□□ -0.52
CSMD1-202ENST00000400186 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
CSMD1-202ENST00000400186 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
CSMD1-202ENST00000400186 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
CSMD1-202ENST00000400186 TERF2IPQ9NYB0 399 aa11.82□□□□□ -0.52
CSMD1-202ENST00000400186 MLECQ14165 292 aa11.82□□□□□ -0.52
CSMD1-202ENST00000400186 TPM2P07951 284 aa11.81□□□□□ -0.52
CSMD1-202ENST00000400186 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-202ENST00000400186 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
CSMD1-202ENST00000400186 FMN1Q68DA7 1419 aa11.8□□□□□ -0.52
CSMD1-202ENST00000400186 SOGA1O94964 1423 aa11.8□□□□□ -0.52
CSMD1-202ENST00000400186 MARCH6O60337 910 aa11.8□□□□□ -0.52
CSMD1-202ENST00000400186 MCTP1Q6DN14 999 aa11.8□□□□□ -0.52
CSMD1-202ENST00000400186 CALRP27797 417 aaKnown RBP11.8□□□□□ -0.52
CSMD1-202ENST00000400186 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.8□□□□□ -0.52
CSMD1-202ENST00000400186 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 PDE4AP27815 886 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 FAM13BQ9NYF5 915 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
CSMD1-202ENST00000400186 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
CSMD1-202ENST00000400186 RILPL2Q969X0 211 aa11.78□□□□□ -0.52
CSMD1-202ENST00000400186 IPO7O95373 1038 aaKnown RBP11.78□□□□□ -0.52
CSMD1-202ENST00000400186 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.52
CSMD1-202ENST00000400186 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
CSMD1-202ENST00000400186 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
CSMD1-202ENST00000400186 REC8O95072 547 aa11.76□□□□□ -0.53
CSMD1-202ENST00000400186 MYBBP1AQ9BQG0 1328 aaKnown RBP11.76□□□□□ -0.53
CSMD1-202ENST00000400186 ANKRD45Q5TZF3 282 aa11.76□□□□□ -0.53
CSMD1-202ENST00000400186 ANKRD20A12PQ8NF67 263 aa11.76□□□□□ -0.53
CSMD1-202ENST00000400186 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
CSMD1-202ENST00000400186 HOMER1Q86YM7 354 aa11.75□□□□□ -0.53
CSMD1-202ENST00000400186 GGT6Q6P531 493 aa11.75□□□□□ -0.53
CSMD1-202ENST00000400186 RRP7AQ9Y3A4 280 aaKnown RBP11.75□□□□□ -0.53
CSMD1-202ENST00000400186 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
CSMD1-202ENST00000400186 FRAT2O75474 233 aaPredicted RBP11.75□□□□□ -0.53
CSMD1-202ENST00000400186 FANCIQ9NVI1 1328 aa11.74□□□□□ -0.53
CSMD1-202ENST00000400186 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
CSMD1-202ENST00000400186 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
CSMD1-202ENST00000400186 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
CSMD1-202ENST00000400186 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
CSMD1-202ENST00000400186 G3V3G9 751 aa11.74□□□□□ -0.53
CSMD1-202ENST00000400186 DCAF8Q5TAQ9 597 aa11.74□□□□□ -0.53
CSMD1-202ENST00000400186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSMD1-202ENST00000400186 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
CSMD1-202ENST00000400186 PCMTD1Q96MG8 357 aaPredicted RBP11.73□□□□□ -0.53
CSMD1-202ENST00000400186 AK7Q96M32 723 aa11.73□□□□□ -0.53
CSMD1-202ENST00000400186 CGNL1Q0VF96 1302 aa11.73□□□□□ -0.53
CSMD1-202ENST00000400186 CCDC18Q5T9S5 1454 aa11.73□□□□□ -0.53
CSMD1-202ENST00000400186 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
CSMD1-202ENST00000400186 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
CSMD1-202ENST00000400186 PLIN1O60240 522 aa11.72□□□□□ -0.53
CSMD1-202ENST00000400186 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
CSMD1-202ENST00000400186 TCEAL9Q9UHQ7 104 aa11.72□□□□□ -0.53
CSMD1-202ENST00000400186 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
CSMD1-202ENST00000400186 RUFY1Q96T51 708 aa11.72□□□□□ -0.53
CSMD1-202ENST00000400186 RUFY2Q8WXA3 655 aa11.72□□□□□ -0.53
CSMD1-202ENST00000400186 AMPHP49418 695 aa11.71□□□□□ -0.53
CSMD1-202ENST00000400186 E9PSI1 815 aa11.71□□□□□ -0.53
CSMD1-202ENST00000400186 ARGLU1Q9NWB6 273 aaPredicted RBP11.71□□□□□ -0.53
CSMD1-202ENST00000400186 SYNE3Q6ZMZ3 975 aa11.71□□□□□ -0.54
CSMD1-202ENST00000400186 CRBNQ96SW2 442 aa11.71□□□□□ -0.54
CSMD1-202ENST00000400186 ZKSCAN1P17029 563 aaPredicted RBP11.71□□□□□ -0.54
CSMD1-202ENST00000400186 BCL2L13Q9BXK5 485 aa11.71□□□□□ -0.54
CSMD1-202ENST00000400186 TRIM29Q14134 588 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 IFT57Q9NWB7 429 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 L3MBTL2Q969R5 705 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 ACBD3Q9H3P7 528 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 WIZO95785 1651 aa11.7□□□□□ -0.54
CSMD1-202ENST00000400186 LTV1Q96GA3 475 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms