RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
LDLRAD4-203ENST00000399848 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
LDLRAD4-203ENST00000399848 SF3A1Q15459 793 aaKnown RBP16.6■□□□□ 0.25
LDLRAD4-203ENST00000399848 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
LDLRAD4-203ENST00000399848 TPM1P09493 284 aa16.6■□□□□ 0.25
LDLRAD4-203ENST00000399848 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
LDLRAD4-203ENST00000399848 GOLGA6L19H0YKK7 550 aa16.6■□□□□ 0.25
LDLRAD4-203ENST00000399848 TPD52L1Q16890 204 aaPredicted RBP16.59■□□□□ 0.25
LDLRAD4-203ENST00000399848 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.25
LDLRAD4-203ENST00000399848 SKOR2Q2VWA4 1001 aaPredicted RBP16.58■□□□□ 0.25
LDLRAD4-203ENST00000399848 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.25
LDLRAD4-203ENST00000399848 TPM2P07951 284 aa16.58■□□□□ 0.24
LDLRAD4-203ENST00000399848 STK26Q9P289 416 aa16.57■□□□□ 0.24
LDLRAD4-203ENST00000399848 CENPJQ9HC77 1338 aaPredicted RBP16.57■□□□□ 0.24
LDLRAD4-203ENST00000399848 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
LDLRAD4-203ENST00000399848 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
LDLRAD4-203ENST00000399848 H3BQV1 296 aa16.57■□□□□ 0.24
LDLRAD4-203ENST00000399848 IFFO2Q5TF58 517 aa16.57■□□□□ 0.24
LDLRAD4-203ENST00000399848 TERF2IPQ9NYB0 399 aa16.56■□□□□ 0.24
LDLRAD4-203ENST00000399848 PDE4CQ08493 712 aa16.56■□□□□ 0.24
LDLRAD4-203ENST00000399848 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
LDLRAD4-203ENST00000399848 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
LDLRAD4-203ENST00000399848 EVA1CP58658 441 aa16.54■□□□□ 0.24
LDLRAD4-203ENST00000399848 PKD2Q13563 968 aa16.54■□□□□ 0.24
LDLRAD4-203ENST00000399848 MARCH6O60337 910 aa16.53■□□□□ 0.24
LDLRAD4-203ENST00000399848 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
LDLRAD4-203ENST00000399848 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.24
LDLRAD4-203ENST00000399848 BECN2A8MW95 431 aa16.52■□□□□ 0.23
LDLRAD4-203ENST00000399848 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.23
LDLRAD4-203ENST00000399848 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
LDLRAD4-203ENST00000399848 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
LDLRAD4-203ENST00000399848 FAM184AQ8NB25 1140 aa16.51■□□□□ 0.23
LDLRAD4-203ENST00000399848 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
LDLRAD4-203ENST00000399848 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
LDLRAD4-203ENST00000399848 CCAR2Q8N163 923 aaKnown RBP16.5■□□□□ 0.23
LDLRAD4-203ENST00000399848 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
LDLRAD4-203ENST00000399848 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
LDLRAD4-203ENST00000399848 TEX35Q5T0J7 233 aa16.5■□□□□ 0.23
LDLRAD4-203ENST00000399848 IPO7O95373 1038 aaKnown RBP16.49■□□□□ 0.23
LDLRAD4-203ENST00000399848 AKAP17AQ02040 695 aaKnown RBP16.49■□□□□ 0.23
LDLRAD4-203ENST00000399848 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD4-203ENST00000399848 CUX2O14529 1486 aa16.49■□□□□ 0.23
LDLRAD4-203ENST00000399848 ANKRD30AQ9BXX3 1397 aa16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 DDX49Q9Y6V7 483 aaKnown RBP16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 TOMM22Q9NS69 142 aa16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
LDLRAD4-203ENST00000399848 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
LDLRAD4-203ENST00000399848 NUP155O75694 1391 aa16.47■□□□□ 0.23
LDLRAD4-203ENST00000399848 ANKRD20A12PQ8NF67 263 aa16.47■□□□□ 0.23
LDLRAD4-203ENST00000399848 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD4-203ENST00000399848 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
LDLRAD4-203ENST00000399848 TRIM34Q9BYJ4 488 aa16.46■□□□□ 0.23
LDLRAD4-203ENST00000399848 GGT6Q6P531 493 aa16.46■□□□□ 0.23
LDLRAD4-203ENST00000399848 ZNF771Q7L3S4 317 aaPredicted RBP16.45■□□□□ 0.22
LDLRAD4-203ENST00000399848 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
LDLRAD4-203ENST00000399848 CALRP27797 417 aaKnown RBP16.45■□□□□ 0.22
LDLRAD4-203ENST00000399848 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
LDLRAD4-203ENST00000399848 GSE1Q14687 1217 aa16.45■□□□□ 0.22
LDLRAD4-203ENST00000399848 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
LDLRAD4-203ENST00000399848 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
LDLRAD4-203ENST00000399848 CLUAP1Q96AJ1 413 aa16.43■□□□□ 0.22
LDLRAD4-203ENST00000399848 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
LDLRAD4-203ENST00000399848 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
LDLRAD4-203ENST00000399848 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
LDLRAD4-203ENST00000399848 REC8O95072 547 aa16.42■□□□□ 0.22
LDLRAD4-203ENST00000399848 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
LDLRAD4-203ENST00000399848 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
LDLRAD4-203ENST00000399848 AMPHP49418 695 aa16.41■□□□□ 0.22
LDLRAD4-203ENST00000399848 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
LDLRAD4-203ENST00000399848 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
LDLRAD4-203ENST00000399848 RUFY2Q8WXA3 655 aa16.41■□□□□ 0.22
LDLRAD4-203ENST00000399848 TRIM29Q14134 588 aa16.4■□□□□ 0.22
LDLRAD4-203ENST00000399848 CCDC47Q96A33 483 aaKnown RBP16.4■□□□□ 0.22
LDLRAD4-203ENST00000399848 AMOTL1Q8IY63 956 aa16.4■□□□□ 0.22
LDLRAD4-203ENST00000399848 CCDC146Q8IYE0 955 aa16.4■□□□□ 0.22
LDLRAD4-203ENST00000399848 MCTP1Q6DN14 999 aa16.39■□□□□ 0.21
LDLRAD4-203ENST00000399848 NOM1Q5C9Z4 860 aaKnown RBP16.39■□□□□ 0.21
LDLRAD4-203ENST00000399848 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
LDLRAD4-203ENST00000399848 DIAPH3Q9NSV4 1193 aa16.39■□□□□ 0.21
LDLRAD4-203ENST00000399848 ANKRD45Q5TZF3 282 aa16.39■□□□□ 0.21
LDLRAD4-203ENST00000399848 ZNF592Q92610 1267 aa16.39■□□□□ 0.21
LDLRAD4-203ENST00000399848 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
LDLRAD4-203ENST00000399848 CDR1P51861 262 aa16.38■□□□□ 0.21
LDLRAD4-203ENST00000399848 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
LDLRAD4-203ENST00000399848 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
LDLRAD4-203ENST00000399848 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
LDLRAD4-203ENST00000399848 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
LDLRAD4-203ENST00000399848 AK7Q96M32 723 aa16.37■□□□□ 0.21
LDLRAD4-203ENST00000399848 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
LDLRAD4-203ENST00000399848 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
LDLRAD4-203ENST00000399848 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
LDLRAD4-203ENST00000399848 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
LDLRAD4-203ENST00000399848 ACBD3Q9H3P7 528 aa16.36■□□□□ 0.21
LDLRAD4-203ENST00000399848 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
LDLRAD4-203ENST00000399848 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
LDLRAD4-203ENST00000399848 E9PSI1 815 aa16.36■□□□□ 0.21
LDLRAD4-203ENST00000399848 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms